Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06660
- Subject:
- XM_017022251.2
- Aligned Length:
- 2526
- Identities:
- 617
- Gaps:
- 1848
Alignment
Query 1 ATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCGGATTTTCTTGCTGGGAAGCGTCTGGCTGGACTA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGTGGGCTCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGGGAACCTCTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTATCAACATCACG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACATCTCAAGGAATATCACTTCCATACACATAGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGTGGACAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGAGCTCTACACCGGACTTCAAAAGCTGACCATCAAGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CCAAGAACCCCCATTTGCGTTATATAAACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGCAGCTCTTCCAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ACGCTGAGTCTTCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACATCCGCTGGATGCAGCT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTGGCAGGAGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCTACTGCATCAACGCTGATGGCTCCCAGCTTC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CTCTCTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGTACGA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GAGGGTGACAATGCTGTTATCACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTGGACTGGATAGTCACTGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GCTGCAGTCCATCAACACTCACCAGACCAATCTGAACTGGACCAATGTTCATGCCATCAACTTGACGCTGGTGA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 ATGTGACGAGTGAGGACAATGGCTTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GTTGCCCTCACTGTCTACTATCCCCCACGTGTGGTGAGCCTGGAGGAGCCTGAGCTGCGCCTGGAGCACTGCAT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CGAGTTTGTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTCCA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGATCATCCATGTGGAATACTACCAAGAGGGAGAGATTTCCGAGGGCTGCCTGCTCTTCAACAAGCCCACCCAC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 TACAACAATG-GCAACTATACCC-TCATTGCCAAAAACCCACTGGGCACAGCCAACCAGACCATCAATGGCCA- 1181
||| | |||.||| |||| ||||||||| |||| |..|||.|||
Sbjct 1 -------ATGTG----TATTCCCTTCAT----------------GGCACAGCC--CCAG----TTCATGTCCAG 41
Query 1182 ---CTTCCT------------CAAGGAGCCCTTTCC-------------------AGAGAGCACGGATAACTTT 1221
.||||| ||| |.||.|.|.|| |||||||||||||||||||
Sbjct 42 ATTGTTCCTTGGTGTGCTGGACAA-GCGCTCCTCCCAGCCTGCTGGTGCAGTCAGAGAGAGCACGGATAACTTT 114
Query 1222 ATCTTGTTTGACGAAGTGAGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGT 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 115 ATCTTGTTTGACGAAGTGAGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGT 188
Query 1296 ATCCATAGCAGTTGGACTTGCTGCTTTTGCCTGTGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATG 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 189 ATCCATAGCAGTTGGACTTGCTGCTTTTGCCTGTGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATG 262
Query 1370 GTCGACGGTCCAAATTTGGAATGAAGGGTCCCGTGGCTGTCATCAGTGGTGAGGAGGACTCAGCCAGCCCACTG 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 263 GTCGACGGTCCAAATTTGGAATGAAGGGTCCCGTGGCTGTCATCAGTGGTGAGGAGGACTCAGCCAGCCCACTG 336
Query 1444 CACCACATCAACCACGGCATCACCACGCCCTCGTCACTGGATGCGGGGCCCGACACTGTGGTCATTGGCATGAC 1517
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 337 CACCACATCAACCACGGCATCACCACGCCCTCGTCACTGGATGCCGGGCCCGACACTGTGGTCATTGGCATGAC 410
Query 1518 TCGCATCCCTGTCATTGAGAACCCCCAGTACTTCCGTCAGGGACACAACTGCCACAAGCCGGACACG------- 1584
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 TCGCATCCCTGTCATTGAGAACCCCCAGTACTTCCGTCAGGGACACAACTGCCACAAGCCGGACACGTATGTGC 484
Query 1585 ---------------------------------------TGGGT--------CTTTTCAAA------------- 1598
||||| ||||..|||
Sbjct 485 AGCACATTAAGAGGAGAGACATCGTGCTGAAGCGAGAACTGGGTGAGGGAGCCTTTGGAAAGGTCTTCCTGGCC 558
Query 1599 -----------------------CATAGACAATCATG-----GGATATTAA--ACTTGAAGGA----------- 1631
||..||||| .||| ||.|.|.|| .|.|||||||
Sbjct 559 GAGTGCTACAACCTCAGCCCGACCAAGGACAA-GATGCTTGTGGCTGTGAAGGCCCTGAAGGATCCCACCCTGG 631
Query 1632 ----------------CAATAGAGA-----------TCA------------------------TCTAGT----- 1649
|.|.||.|| ||| ||.|||
Sbjct 632 CTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCTGCTCACCAACCTGCAGCATGAGCACATTGTCAAGTTCTAT 705
Query 1650 ---------------------CCCATCAACTCA----CTAT--ATATATGA-----GGA-ACCTGA-------- 1682
|||.||| ||| ||.| |||.|||| ||| ||||||
Sbjct 706 GGAGTGTGCGGCGATGGGGACCCCCTCA--TCATGGTCTTTGAATACATGAAGCATGGAGACCTGAATAAGTTC 777
Query 1683 ------------GGTCCAGA-------------GTGG--GG----------------AAGTGT---------CT 1704
||.||||| |||| || |||.|| ||
Sbjct 778 CTCAGGGCCCATGGGCCAGATGCAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT 851
Query 1705 TACCCAA--GGT-CACATGGTTTCAGAGAAAT---------TATGTTGAATCCAATAAGCCTTCCCGGACATT- 1765
..||||| |.| ||||| |..|||..|.|| ||||.||.|.| ..||||.||.|.||.||
Sbjct 852 CTCCCAAATGCTCCACAT--TGCCAGTCAGATCGCCTCGGGTATGGTGTACC----TGGCCTCCCAGCACTTTG 919
Query 1766 ----CCAAG-CCTCTTAACCATG-----------------GCATCT-------------------------ATG 1792
||.|| |||....||||.| |.|||| |||
Sbjct 920 TGCACCGAGACCTGGCCACCAGGAACTGCCTGGTTGGAGCGAATCTGCTAGTGAAGATTGGGGACTTCGGCATG 993
Query 1793 TTGAG-GATGT------CAATGTTTATTTCAGCAAAGG---------ACGTCATGGCT-----TT--------- 1836
|..|| ||||| ||..|.|||||.||| || ||..||| ||| ||
Sbjct 994 TCCAGAGATGTCTACAGCACGGATTATTACAG----GGTGGGAGGACACACCAT-GCTCCCCATTCGCTGGATG 1062
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1063 CCTCCTGAAAGCATCATGTACCGGAAGTTCACTACAGAGAGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGA 1136
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1137 GATCTTCACCTATGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGAGGTCATTGAGTGCATTACCCAAGGTC 1210
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1211 GTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATGCTGGGGTGCTGGCAGAGGGAACCA 1284
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1285 CAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGGA 1358
Query 1837 ---------- 1836
Sbjct 1359 CATTCTTGGC 1368
