Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06700
Subject:
XM_006505730.3
Aligned Length:
2607
Identities:
1650
Gaps:
729

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGTTCTGTCTCCTCCGTGCTGGCGCGGTCCCGCAACACCGTCGTGCAGCCGGGATCGTCGCCGCCGCATCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAAGTGCCGCTCGCTGCTCCCGCGTCTCTCAAAGACTCTAGAACCCAGCGTCGGGTACTCGGGCATCAAGGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTTCAGACCTTCCCCAGCCTGGGAACCGCCGCCGGCCAAGCACAGCCAGCAGGAGCTTCCAAAGTTGGAGAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGGAGCTGTCCCCCGTGCGGAGGCGTTTGCCAGCTATGTCCCAGTCCTCCCCCAGCGACAGCCCAGGAGAGAC  296

Query    1  ---------------------------------------------------------------ATGGAGTCGCC  11
                                                                           | ||||     
Sbjct  297  TGGCACTGGGAAGACAGAAGAGTTGAACACCCAGACAGACGCCACAGAAAAACAGCCAGCTGCA-GGAG-----  364

Query   12  AACAA--------------AGGAGATTGAAGAAT----------TTG------------------------AGA  37
            |||||              ||||||  .||||||          |||                        |||
Sbjct  365  AACAAGTTGCAAATGAAGCAGGAGA--CAAGAATGCCAGACCACTTGCTCGCTTCTCCCGGTCTAAGTCACAGA  436

Query   38  ---------GCAACTCTCT-----------------GAAATA-----------------CCTGCAA----CCGG  64
                     |.|||||.||                 |.||||                 ||..|||    ||.|
Sbjct  437  ACTGCCTGTGGAACTCCCTCATTGATGGGCTCACTGGGAATATTAAGGAGAAACCACGGCCAACAATTGTCCAG  510

Query   65  AACA---GATC-----GAGAAAATCTGGC-------TTCGGCTCCGCGGGCTGAG----GAAATAT-----AAG  114
            .|||   ||.|     .|||||.||||||       || |.|.|.||.||.| ||    |||...|     |||
Sbjct  511  GACACGCGACCCCCAGAAGAAATTCTGGCAGATGAGTT-GCCACAGCTGGAT-AGCCCAGAAGCTTTGGTGAAG  582

Query  115  AAAACGTCCCAGAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCTTAAGAA  188
            |.|.|.|.|   ||.|||||||||||||||||.||||||||..||||.||.||.||.||||||||.||||||||
Sbjct  583  ACATCTTTC---AGGTTACGGTCTTTGGTCAAGCAATTAGAACGAGGAGAGGCCTCTGTGGTAGACCTTAAGAA  653

Query  189  GAATTTGGAATATGCAGCCACAGTGCTTGAATCTGTGTATATTGATGAAACAAGGAGACTCCTGGATACAGAGG  262
            ||||.|||||||||||||||||||||||||||||||.||||||||||||||||||.||||.|||||||||||||
Sbjct  654  GAATCTGGAATATGCAGCCACAGTGCTTGAATCTGTATATATTGATGAAACAAGGCGACTGCTGGATACAGAGG  727

Query  263  ATGAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCTGAGGTCCGAGACTGGCTGGCCTCCACCTTCACGCGG  336
            |||||||.|||||||||||.|||||||||||||||||.||.||.||.||.||||||||||||||||||||.|||
Sbjct  728  ATGAGCTTAGTGACATTCAATCAGATGCTGTGCCTTCAGAAGTTCGGGATTGGCTGGCCTCCACCTTCACACGG  801

Query  337  CAGATGGGGATGATGCTCAGGAGGAGCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGG  410
            |||||||||||||||||.|||||.||.||.|||||||||.||||||||||||||||.||.||.|||||.|||||
Sbjct  802  CAGATGGGGATGATGCTTAGGAGAAGTGATGAGAAGCCCAGGTTCAAGAGCATCGTCCATGCGGTGCAAGCTGG  875

Query  411  GATATTTGTGGAGAGAATGTATAGACGGACATCAAACATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAGG  484
            ||||||||||||.||||||||.|||||||||||||||||||||||.||||||||||||||.|||||.||.||.|
Sbjct  876  GATATTTGTGGAAAGAATGTACAGACGGACATCAAACATGGTTGGGCTGAGCTATCCACCGGCTGTAATCGATG  949

Query  485  CATTAAAGGATGTGGACAAGTGGTCATTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGATCATGCACTGAAA  558
            ||||.|||||||||||.|.||||||.||.||.||||||||||||||||||||||||||.||||||||||||||.
Sbjct  950  CATTGAAGGATGTGGATACGTGGTCCTTCGATGTCTTTTCCCTCAATGAGGCCAGTGGAGATCATGCACTGAAG  1023

Query  559  TTTATTTTCTATGAACTACTCACACGTTATGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTC  632
            ||.||||||||||||.||||||||||||||||.||||||||||||||.|||||.||.|||||||||||||||||
Sbjct 1024  TTCATTTTCTATGAATTACTCACACGTTATGACCTGATCAGCCGTTTTAAGATACCGATTTCTGCACTTGTCTC  1097

Query  633  ATTTGTGGAGGCCCTGGAAGTGGGATACAGCAAGCACAAAAATCCTTACCATAACTTAATGCACGCTGCCGATG  706
            |||||||||||||||.||||||||.||||||||||||||||||||||||||||||.|.|||||.||.||.||.|
Sbjct 1098  ATTTGTGGAGGCCCTCGAAGTGGGTTACAGCAAGCACAAAAATCCTTACCATAACCTGATGCATGCAGCTGACG  1171

Query  707  TTACACAGACAGTGCATTACCTCCTCTATAAGACAGGAGTGGCGAACTGGCTGACGGAGCTGGAGATCTTTGCT  780
            |.||||||||.||||||||||||||.||||||||||||||.||.|||||||||||.|||||||||||||||||.
Sbjct 1172  TCACACAGACTGTGCATTACCTCCTTTATAAGACAGGAGTAGCAAACTGGCTGACAGAGCTGGAGATCTTTGCA  1245

Query  781  ATAATCTTCTCAGCTGCCATCCATGACTACGAGCATACCGGAACCACCAACAATTTCCACATTCAGACTCGGTC  854
            ||||||||.||.|||||||||||||||||.||.|||||.|||||.||.||||||||||||||||||||||||||
Sbjct 1246  ATAATCTTTTCGGCTGCCATCCATGACTATGAACATACTGGAACTACAAACAATTTCCACATTCAGACTCGGTC  1319

Query  855  TGATCCAGCTATTCTGTATAATGACAGATCTGTACTGGAGAATCACCATTTAAGTGCAGCTTATCGCCTTCTGC  928
            .|||||||||||.|||||.||||||||||||||.||||||||.|||||..|.||||||||.||.||||||||||
Sbjct 1320  AGATCCAGCTATCCTGTACAATGACAGATCTGTCCTGGAGAACCACCACCTGAGTGCAGCCTACCGCCTTCTGC  1393

Query  929  AAGATGACGAGGAAATGAATATTTTGATTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACCTTGGTAATT  1002
            |.||.|||||.||.|||||||||.||.|||||||||||||||||||||||||||||||||||||.|||||.|||
Sbjct 1394  AGGAAGACGAAGAGATGAATATTCTGGTTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACTTTGGTTATT  1467

Query 1003  GAAATGGTGATGGCCACAGATATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAGACTGCTCTGCAGCAGCC  1076
            ||.|||||.|||||||||||||||||.|||||.|||||.|||||||||||.||||||||.||.||||||||.||
Sbjct 1468  GAGATGGTAATGGCCACAGATATGTCCTGTCATTTCCAGCAAATCAAAGCCATGAAGACAGCCCTGCAGCAACC  1541

Query 1077  AGAAGCCATTGAAAAGCCAAAAGCCTTATCCCTTATGCTGCATACAGCAGATATTAGCCATCCAGCAAAAGCAT  1150
            ||||||.|||||.|||||.||||||||||||||.|||.|.||.||||||||.||.||.|||||.||.|||||||
Sbjct 1542  AGAAGCAATTGAGAAGCCGAAAGCCTTATCCCTCATGTTACACACAGCAGACATCAGTCATCCTGCGAAAGCAT  1615

Query 1151  GGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAGAAGCAGAGCTG  1224
            |||||||.||.||.||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1616  GGGACCTGCACCACCGCTGGACCATGTCTCTCCTGGAGGAGTTCTTTAGACAGGGTGACAGAGAAGCAGAGCTG  1689

Query 1225  GGGCTGCCTTTTTCTCCTCTGTGTGACCGAAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATTGATTT  1298
            ||||||||.|||||||||||.||||||.|||||||.||.||||||||||||||||||||.|||||.|||||.||
Sbjct 1690  GGGCTGCCATTTTCTCCTCTTTGTGACAGAAAGTCAACCATGGTTGCTCAGTCACAAGTGGGTTTTATTGACTT  1763

Query 1299  CATCGTGGAACCCACCTTCACTGTGCTTACGGACATGACCGAGAAGATTGTGAGTCCATTAATCGATGAAACCT  1372
            |||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||.||
Sbjct 1764  CATTGTGGAGCCCACCTTCACTGTGCTCACGGACATGACCGAGAAGATTGTGAGTCCATTAATTGACGAAAGCT  1837

Query 1373  CTCAAACTGGTGGGACAGGACAGAGGCGTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGT  1446
            |.||.||||||||||||||.||||||.|.||.||||||||.|||||||.|||.||||||||.||||||||.|||
Sbjct 1838  CCCAGACTGGTGGGACAGGGCAGAGGAGATCAAGTTTGAACAGCATCAACTCATCAGATGCAAAGCGATCCGGT  1911

Query 1447  GTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGATCAACAATTCTGTCATCTCC-GTTGACTATAAGAGCTTTA  1519
            |||||||..|||||.|||||.||||||||.||.||||||||||||||||| ||| ||||||||||||||.||||
Sbjct 1912  GTCAAGAGTTCTGGGTCAGATGGAAGTGCTCCCATCAACAATTCTGTCAT-TCCTGTTGACTATAAGAGTTTTA  1984

Query 1520  AAGCTACTTGGACGGAAGTGGTGCACATCAATCGGGAGAGATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCC  1593
            ||||.||||||||.||.||||||||.||||||||||||.|.|||.|.|||||||||||||||||.||.||.|||
Sbjct 1985  AAGCCACTTGGACTGAGGTGGTGCAGATCAATCGGGAGCGGTGGCGAGCCAAGGTACCCAAAGAAGAAAAAGCC  2058

Query 1594  AAGAAGGAAGCAGAGGAAAAGGCTCGCATGGCCGCAGAGGAGCAGCAAAAGGAAATGGAAGCCAAAAGCCAGGC  1667
            |||||||||||.||.||.|||||||||.||||.||.|||||..||||||||||||||||||||||||||||.||
Sbjct 2059  AAGAAGGAAGCTGAAGAGAAGGCTCGCCTGGCTGCTGAGGAAAAGCAAAAGGAAATGGAAGCCAAAAGCCAAGC  2132

Query 1668  TGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGACGTCTGGAGAAACTAAGAATCAAGTCAATGGAACACGGG  1741
            ||||.|||||.||.|..||||||..|||||||||||.||.||||||.|.||.|.||||||||||||||||||  
Sbjct 2133  TGAACAAGGCACAACCAGCAAAGGCGAGAAAAAGACATCAGGAGAAGCCAAAAGTCAAGTCAATGGAACACG--  2204

Query 1742  CAAACAAAAGTGACAACCCTCGTGGGAAAAATTCCAAAGCCGAGAAGTCATCAGGAGAACAGCAACAGAATGGT  1815
                |||..||||.||||||||||||||.||.|||||||..||.|||   .||||.|||.||||.|||||.|||
Sbjct 2205  ----CAAGGGTGATAACCCTCGTGGGAAGAACTCCAAAGGAGAAAAG---GCAGGCGAAAAGCAGCAGAACGGT  2271

Query 1816  GACTTCAAAGATGGTAAAAATAAGACAGACAAGAAGGATCACTCTAACATCGGAAATGATTCAAAGAAAACAGA  1889
            |||||.|||||.||||||||||||.|||||||||||||||||||.||||.|||||||||.||||||||||||||
Sbjct 2272  GACTTGAAAGACGGTAAAAATAAGGCAGACAAGAAGGATCACTCCAACACCGGAAATGAGTCAAAGAAAACAGA  2345

Query 1890  TGATTCACAAGAG-------------------------------------------------------------  1902
            ||.|.|| ||||.                                                             
Sbjct 2346  TGGTACA-AAGAAGCGTTCTCATGGCTCACCTGCTCCGAGCACTAGTTCCACAAGTCGCATTACCTTGCCAGTC  2418

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 2419  ATCAAGCCTCCTTTGCGTCACTTTAAGCGTCCTGCTTATGCATCTAGCTCCTATGCACCTTCCGTCCCGAAGAA  2492

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 2493  AACTGATGATCATCCTGTAAGATACAAGATGCTGGATCAGCGGATCAAGATGAAAAAGATCCAGAACATCTCTC  2566

Query 1903  -----------------  1902
                             
Sbjct 2567  ATCACTGGAACAAAAAA  2583

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