Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06761
- Subject:
- XM_017315925.1
- Aligned Length:
- 1563
- Identities:
- 807
- Gaps:
- 636
Alignment
Query 1 ATGTCCGGGAGGCGCTTCCACCTCTCCACCACCGACCGCGTCATCAAAGCTGTCCCCTTTCCTCCAACCCAACG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTTACTTTCAAGGAAGTATTTGAGAATGGGAAACCTAAAGTTGATGTTTTAAAAAACCATTTGGTAAAGGAAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GACGACTGGAAGAGGAAGTAGCCTTAAAGATAATCAATGATGGGGCTGCCATCCTGAGGCAAGAGAAGACTATG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 ATAGAAGTAGATGCTCCAATCACAGTATGTGGTGATATTCATGGACAATTCTTTGACCTAATGAAGTTATTTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGTTGGAGGATCACCTAGTAACACACGCTACCTCTTTCTGGGTGACTATGTGGACAGAGGCTATTTCAGTATAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGTGTGTGCTGTATTTATGGAGTTTAAAGATTAATCATCCCAAAACATTGTTTCTGCTTCGGGGAAATCATGAA 444
|||||
Sbjct 1 ---------------------------------------------------------------------ATGAA 5
Query 445 TGCAGGCATCTTACAGACTATTTCACCTTCAAACAGGAATGTCGAATCAAATATTCGGAACAGGTGTATGATGC 518
|||||||||||||||||.||.|||||||||||||||||||
Sbjct 6 TGCAGGCATCTTACAGAGTACTTCACCTTCAAACAGGAAT---------------------------------- 45
Query 519 CTGTATGGAGACATTTGACTGTCTTCCTCTTGCTGCCCTCTTAAACCAGCAGTTTCTCTGTGTACATGGAGGAA 592
Sbjct 46 -------------------------------------------------------------------------- 45
Query 593 TGTCACCTGAAATTACTTCTTTAGATGACATTAGGAAATTAGACAGGTTTACGGAACCTCCCGCCTTTGGACCT 666
|||||.||||||.|.||.|||||.||.|||||.||.
Sbjct 46 --------------------------------------TTAGATAGGTTTTCTGAGCCTCCTGCTTTTGGGCCA 81
Query 667 GTGTGTGACCTGCTTTGGTCTGATCCCTCAGAGGATTATGGCAATGAGAAGACCTTGGAGCACTATACCCACAA 740
||||||||||||||.|||||||||||||.||||||.||.||||..|||||||||.|||||||||||||||||||
Sbjct 82 GTGTGTGACCTGCTGTGGTCTGATCCCTTAGAGGACTACGGCAGCGAGAAGACCCTGGAGCACTATACCCACAA 155
Query 741 CACTGTCCGAGGGTGCTCTTATTTCTACAGTTACCCTGCAGTTTGTGAATTTTTGCAGAACAATAATTTACTAT 814
||||||||||||.|||||.||.||||.|||||||||||||||||||||||||||.||||||||.|.||||.|||
Sbjct 156 CACTGTCCGAGGCTGCTCCTACTTCTTCAGTTACCCTGCAGTTTGTGAATTTTTACAGAACAACAGTTTATTAT 229
Query 815 CAATTATCAGAGCCCATGAAGCCCAAGATGCTGGGTATCGAATGTACAGGAAGAGCCAAGCCACAGGCTTTCCA 888
||||.||||||||||||||||||||.|||||.|||||.||||||||.|||||||.||||||.||.||||||||.
Sbjct 230 CAATAATCAGAGCCCATGAAGCCCAGGATGCGGGGTACCGAATGTATAGGAAGAACCAAGCAACTGGCTTTCCG 303
Query 889 TCACTTATTACAATTTTCTCTGCCCCCAATTACCTAGATGTCTATAACAATAAAGCTGCTGTGTTGAAATATGA 962
|||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||.||||||||.|||||
Sbjct 304 TCACTTATTACGATTTTCTCTGCCCCTAATTACCTAGATGTCTATAACAATAAAGCTGCAGTGTTGAAGTATGA 377
Query 963 AAACAATGTCATGAATATCAGGCAGTTTAACTGTTCTCCACACCCCTACTGGCTTCCAAACTTTATGGATGTTT 1036
|||||||||||||||.|||||||||||.||||||||.|||||||||||||||||.||||||||.||||||||||
Sbjct 378 AAACAATGTCATGAACATCAGGCAGTTCAACTGTTCCCCACACCCCTACTGGCTCCCAAACTTCATGGATGTTT 451
Query 1037 TCACATGGTCTTTGCCTTTTGTTGGGGAAAAAGTCACAGAGATGCTGGTAAATGTGCTCAACATATGCTCTGAT 1110
||||.||||||||||||||||||||.||.|||||.||||||||||||||.|||.|.||||||||||||||.|||
Sbjct 452 TCACGTGGTCTTTGCCTTTTGTTGGAGAGAAAGTGACAGAGATGCTGGTCAATATTCTCAACATATGCTCGGAT 525
Query 1111 GACGAACTGA---TTTCTGATGATGAAGCAGAAGGAAGC-ACTACAGTTCGTAAGGAGATCATCAGGAATAAGA 1180
||.|||.||| |..|.||||| |||||| ||| |||||||.|||.||.||..||||||.||||||.|
Sbjct 526 GAAGAAATGAACGTAACCGATGA------AGAAGG-AGCTACTACAGGTCGAAAAGAAGTCATCAAGAATAAAA 592
Query 1181 TCAGAGCCATTGGGAAGATGGCACGGGTCTTTTCAATTCTTCGGCAAGAAAGTGAGAGTGTGCTGACTCTCAAG 1254
||.|||||||||||||.|||||.|||||||||.|..||||||||.||||.|||||||.|||||||||.||||||
Sbjct 593 TCCGAGCCATTGGGAAAATGGCCCGGGTCTTTACGGTTCTTCGGGAAGAGAGTGAGAATGTGCTGACCCTCAAG 666
Query 1255 GGCCTGACTCCCACAGGCACACTCCCTCTGGGCGTCCTCTCAGGAGGCAAGCAGACTATCGAGACAGCCACAGT 1328
|||||.||||||||||||||||||||.|||||.||||||||.|||||.||||||||.||.|||||.||||.|..
Sbjct 667 GGCCTCACTCCCACAGGCACACTCCCACTGGGGGTCCTCTCTGGAGGAAAGCAGACCATTGAGACTGCCAAACA 740
Query 1329 AGAAGCGGTAGAGGCCCGGGAAGCCATCAGAGGGTTCTCGCTT-CAGCACAAGATCCGGAGTTTTGAAGAAGCG 1401
||||||.|.|||||..|||||||||||||||||.||..|..|| || ||||.||||||.||||||||||||||.
Sbjct 741 AGAAGCCGCAGAGGAGCGGGAAGCCATCAGAGGTTTTACAATTGCA-CACAGGATCCGAAGTTTTGAAGAAGCC 813
Query 1402 CGAGGTCTGGACCGAATTAATGAGCGAATGCCACCCCGAAAGG-------ATAGCATACACGCTGGTGGGCCAA 1468
||||||||.|||||||||||||||.||||||||||||||||.| |||.||| ||.|.||..|||...|
Sbjct 814 CGAGGTCTAGACCGAATTAATGAGAGAATGCCACCCCGAAAAGAGGCTTCATATCAT-CATGATGCAGGGAGGA 886
Query 1469 TGAAATCTGTAACCTCAGCACACTCACATGCTGCGCAC---------------AGGAGCGACCAAGGGAAAAAA 1527
||.|.| |||||||.|||.|..|.||| ||||.||||||.||.||.|||
Sbjct 887 TGCACT------------CACACTCGCATCCGCCACACCCACAGGCGTCAAGAAGGACCGACCATGGAAAGAAA 948
Query 1528 GCCCATTCA 1536
||||..
Sbjct 949 GCCCTG--- 954
