Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06791
- Subject:
- NR_026824.1
- Aligned Length:
- 1742
- Identities:
- 945
- Gaps:
- 737
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGAAGGAGGAAGGACAGCACAGCCTACAGCCGTGCTCAGGAAGTTTCTGGAACCTAGGCTCATCTCCACAGA 74
Query 1 -------------------------ATGGGACCCCTCTCAGCCCCTCCCTGCACACAGCACATCACCTGGAAGG 49
|||||.||||||||||||||||||||||||||||||||||..|||||||
Sbjct 75 GGAGAACACACAAGCAGCAGAGACCATGGGGCCCCTCTCAGCCCCTCCCTGCACACAGCACATCAAATGGAAGG 148
Query 50 GGGTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCTGCCTATCACTGCTCAAGTCACGATTGAAGCCCTG 123
|||||||||||||||||||||||||||||||||||||||..||||.||.|||.||||||||||.||||||||.|
Sbjct 149 GGGTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCCACCTACCATTGCCCAAGTCACGACTGAAGCCCAG 222
Query 124 CCACCCAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCTCAGAATCTTGCTGGCTACAT 197
|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||.||||.|||||
Sbjct 223 CCACCCAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACTGGTTACAT 296
Query 198 CTGGTACAAAGGACAACTGATGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTCAAATAAATATAT 271
.|||||.|||||.|||.|.|.||||||||||||||||||||||||||||||||||||||||||||.||.||.||
Sbjct 297 GTGGTAGAAAGGGCAAATAAGGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTCAAAGAATTACAT 370
Query 272 ATGGGCCTGCATACACTGGACGAGAAACAGTATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAA 345
|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 371 ATGGGCCTGCATACAGTGGACGAGAAACAGTATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAG 444
Query 346 GACGCAGGATCCTATACCTTACACATCATAAAGCGAGGTGATAGGACTAGAGGAGTAACTGGATATTTCACCTT 419
||||.||.||||||.|||||||||||||||.|||||||||||.||||||||||||||||||||.||||||||||
Sbjct 445 GACGGAGTATCCTACACCTTACACATCATACAGCGAGGTGATGGGACTAGAGGAGTAACTGGAAATTTCACCTT 518
Query 420 CAACTTATACCTGAAGCTGCCCAAGCCCTACATCACCATCAACAACTCAAAACCCAGGGAGAATAAGGATGTCT 493
||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCTTATACCCGAAGCTGCCCAAGCCCTACATCACCATCAACAACTCAAAACCCAGGGAGAATAAGGATGTCT 592
Query 494 TAGCCTTCACCTGTGAACCTAAGAGTGAGAACTACACCTACATTTGGTGGCTAAATGGTCAGAGCCTCCCGGTC 567
||.|||||||||||||.|||||.|||||||||||||||||||..||||||||||||||||||||||||||.|||
Sbjct 593 TACCCTTCACCTGTGACCCTAAAAGTGAGAACTACACCTACACGTGGTGGCTAAATGGTCAGAGCCTCCCAGTC 666
Query 568 AGTCCCAGGGTAAAGCAACCCATTGAAAACAGGATCCTCATTCTACCCAGTGTCACGAGAAATGAAACAGGACC 641
|||||||||||||||..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTCCCAGGGTAAAGTGACCCATTGAAAACAGGATCCTCATTCTACCCAGTGTCACGAGAAATGAAACAGGACC 740
Query 642 CTATGAATGTGAAATACGGGACCGAGATGGTGGCATGCACAGTGACCCAGTCACCCTGAATGTCCTCTATGGTC 715
||||.||||||||||||||||||||.||||||||||.|.||||.||||||||||||||||||||||||||||||
Sbjct 741 CTATCAATGTGAAATACGGGACCGATATGGTGGCATCCGCAGTAACCCAGTCACCCTGAATGTCCTCTATGGTC 814
Query 716 CAGACCTCCCCAGCATTTACCCTTCATTCACCTATTACCGTTCAGGAGAAAACCTCTACTTGTCCTGCTTCGCG 789
|||||||||||||.|||||||||||||||||||||||||||||||||.|||||||.||||||||||||||||||
Sbjct 815 CAGACCTCCCCAGAATTTACCCTTCATTCACCTATTACCGTTCAGGACAAAACCTTTACTTGTCCTGCTTCGCG 888
Query 790 GAATCTAACCCACCGGCAGAGTATTTTTGGACAATTAATGGGAAGTTTCAGCAATCAGGACAAAAGCTCTCTAT 863
||||.|||||||||||||.||||.|.||||||||||||||||||||||||||||||||.|||||||||||.|||
Sbjct 889 GAATGTAACCCACCGGCATAGTACTCTTGGACAATTAATGGGAAGTTTCAGCAATCAGAACAAAAGCTCTTTAT 962
Query 864 CCCCCAAATTACTACAAAGCATAGAGGGCTCTATACTTGCTCTGTTCGTAACTCAGCCACTGGCAAGGAAAGCT 937
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCCCCAAATTACTACAAAGCATAGAGGGCTCTATGCTTGCTCTGTTCGTAACTCAGCCACTGGCAAGGAAAGCT 1036
Query 938 CCAAATCCATGACAGTCGAAGTCTC------------------------------------------------- 962
|||||||||||||||||||||||||
Sbjct 1037 CCAAATCCATGACAGTCGAAGTCTCTGGTGCCTGCCATGGAGACCTGGCAGGGTCTCATTCGTGACTGCCATAA 1110
Query 963 -------------------------------------------------------------------------- 962
Sbjct 1111 CAGAGACACTGAGAAAAAGATGCAACCATGGAAAGGTGCAAAGGTGGCAAGTTCTAATGACATAGAAAATAGCA 1184
Query 963 -------------------------------------------------------------------------- 962
Sbjct 1185 ATCAGCCTTTCTCACATCTGAAAGCCTTCCAAAATATCTGAGTGCAGTAGAGAATTGACAGAGGACTGATCACC 1258
Query 963 ------------TGCTCCTTCAGGAATAGGACGTCTACCTCTCATTAATCCAATA------------------- 1005
|||||||.||||||||||||||||.|||.||.|||.|||||||
Sbjct 1259 AACCTAGAAGTATGCTCCTCCAGGAATAGGACGTCTTCCTTTCTTTACTCCAATAGAGCAGCGGTGATGTCATT 1332
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1333 TCTGTATTTCAGGAAGACTGGCAGGAGATTTATGGAAAAGACTCTGACAAGGACTCTGGAATACAAGCTCCTGA 1406
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1407 TAACTTCAAGATCATACCACTGGACTAAGAACTTTCAAAATTTTAATGAACAGGCTGATACCTTCATGAAATTC 1480
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1481 AAGACAAAGAAGAAAAAAAACTCAATTTTATTGGAATAAATAATCAAAAGGATAATGTTTTCATAATTTTCTAT 1554
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1555 TTGAAAATGTGCTGAGTCTTTGAATGTTTTATTCTCCAGATTTATGAACTTTTTTCCTTGAACAATTGGTAAAG 1628
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1629 TATACTTTTGTAAACAAAAATTGAAACATTTGCTTTTGCTGAGTGCCCCAGAATTGGGAAACTATTCATGAGTA 1702
Query 1006 ---------------------------------------- 1005
Sbjct 1703 TTCATATGTTTATGGTAATAAAGTTATTTGCACAACTTCA 1742
