Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06863
Subject:
XM_017320465.2
Aligned Length:
1461
Identities:
1227
Gaps:
105

Alignment

Query    1  ATGGCCCAGGGGAATAATTATGGGCAGACCAGCAACGGGGTGGCCGATGAATCACCCAACATGCTGGTGTACAG  74
            |||||.|||||.|||||||||||.||||||||||||||||||||.||.||||||||||||||||||||||||||
Sbjct    1  ATGGCTCAGGGAAATAATTATGGACAGACCAGCAACGGGGTGGCGGACGAATCACCCAACATGCTGGTGTACAG  74

Query   75  AAAGATGGAAGACGTCATAGCACGGATGCAAGATGAAAAAAATGGAATTCCTATTCGTACGGTCAAAAGCTTTC  148
            ||||||||||||.|||||||||||.||||||||.||.|||||.||||||||.||.|||||.|||||||||||.|
Sbjct   75  AAAGATGGAAGATGTCATAGCACGTATGCAAGACGAGAAAAACGGAATTCCCATCCGTACCGTCAAAAGCTTCC  148

Query  149  TTTCCAAGATACCTAGCGTCTTCTCTGGTTCAGACATTGTTCAATGGTTGATAAAGAACTTAACTATAGAAGAT  222
            ||||||||||.||.||.||.||||                                                  
Sbjct  149  TTTCCAAGATCCCCAGTGTGTTCT--------------------------------------------------  172

Query  223  CCAGTGGAGGCGCTCCATTTGGGAACATTAATGGCTGCCCACGGCTACTTCTTTCCAATCTCAGATCATGTCCT  296
             |.||||||||.||||||||||||||..|||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct  173  -CCGTGGAGGCTCTCCATTTGGGAACGCTAATGGCTGCCCATGGCTACTTCTTTCCCATCTCAGATCATGTCCT  245

Query  297  CACACTCAAGGATGATGGCACCTTTTACCGGTTTCAAACCCCCTATTTTTGGCCATCAAATTGTTGGGAGCCGG  370
            |||||||||||||||.||||||||.||||||||||||||.||||||||||||||.|||||||||||||||||.|
Sbjct  246  CACACTCAAGGATGACGGCACCTTCTACCGGTTTCAAACACCCTATTTTTGGCCGTCAAATTGTTGGGAGCCAG  319

Query  371  AAAACACAGATTATGCCGTTTACCTCTGCAAGAGAACAATGCAAAACAAGGCACGACTGGAGCTCGCAGACTAT  444
            ||||||||||.|||||.||||||||||||||||||||||||||||||||||||.|.||.|||||.|||||.|||
Sbjct  320  AAAACACAGACTATGCTGTTTACCTCTGCAAGAGAACAATGCAAAACAAGGCAAGGCTAGAGCTAGCAGATTAT  393

Query  445  GAGGCTGAGAGCCTGGCCAGGCTGCAGAGAGCATTTGCCCGGAAGTGGGAGTTCATTTTCATGCAAGCAGAAGC  518
            ||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  394  GAAGCCGAGAGCCTGGCCAGGCTGCAGAGAGCATTTGCCCGGAAGTGGGAGTTCATTTTTATGCAAGCAGAAGC  467

Query  519  ACAAGCAAAAGTGGACAAGAAGAGAGACAAGATTGAAAGGAAGATCCTTGACAGCCAAGAGAGAGCGTTCTGGG  592
            ||||||.|||||||||||||||||||||||.|||||||||||||||||.||.||.|||||||||||.|||||||
Sbjct  468  ACAAGCTAAAGTGGACAAGAAGAGAGACAAAATTGAAAGGAAGATCCTCGATAGTCAAGAGAGAGCATTCTGGG  541

Query  593  ACGTGCACAGGCCCGTGCCTGGATGTGTAAATACAACTGAAGTGGACATTAAGAAGTCATCCAGAATGAGAAAC  666
            |.||.||||||||.||||||||||||||||||||.||.||||||||||||||||||||||||.|.|||||||||
Sbjct  542  ATGTCCACAGGCCTGTGCCTGGATGTGTAAATACTACAGAAGTGGACATTAAGAAGTCATCCCGGATGAGAAAC  615

Query  667  CCCCACAAAACACGGAAGTCTGTCTATGGTTTACAAAATGATATTAGAAGTCACAGTCCTACCCACACACCCAC  740
            ||.|||||||||||.||||||||||||||||||||||||||.||..|||||||||||||.|||||||||||.||
Sbjct  616  CCACACAAAACACGAAAGTCTGTCTATGGTTTACAAAATGACATCCGAAGTCACAGTCCCACCCACACACCTAC  689

Query  741  ACCAGAAACTAAACCTCCAACAGAAGATGAGTTACAACAACAGATAAAATATTGGCAAATACAGTTAGATAGAC  814
            |||||||||.||.|||||.||||||||||||.|.||.||||||||||||||.||||||||||||||||||||||
Sbjct  690  ACCAGAAACCAAGCCTCCTACAGAAGATGAGCTGCACCAACAGATAAAATACTGGCAAATACAGTTAGATAGAC  763

Query  815  ATCGGTTAAAAATGTCAAAAGTCGCTGACAGTCTACTAAGTTACACGGAACAGTATTTAGAATACGACCCGTTT  888
            ||||||||||||||||||||||.|||||.|||||||||||.||.||||||||||||.|||||||.|||||||||
Sbjct  764  ATCGGTTAAAAATGTCAAAAGTTGCTGATAGTCTACTAAGCTATACGGAACAGTATGTAGAATATGACCCGTTT  837

Query  889  CTTTTGCCACCTGACCCTTCTAACCCATGGCTGTCCGATGACACCACTTTCTGGGAACTTGAGGCAAGCAAAGA  962
            |||.||||.|||||||||||.||.||||||||.||.|||||.||.|||||||||||||||||.|||||||||||
Sbjct  838  CTTGTGCCGCCTGACCCTTCCAATCCATGGCTCTCAGATGATACGACTTTCTGGGAACTTGAAGCAAGCAAAGA  911

Query  963  ACCGAGCCAGCAGAGGGTAAAACGATGGGGTTTTGGCATGGACGAGGCATTGAAAGACCCAGTTGGGAGAGAAC  1036
            |||.||.||.||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||.||||.|
Sbjct  912  ACCAAGTCAACAGAGGGTAAAACGATGGGGTTTTGGTATGGATGAGGCATTGAAAGACCCAGTTGGGCGAGAGC  985

Query 1037  AGTTCCTTAAATTTCTAGAGTCAGAATTCAGCTCGGAAAATTTAAGATTCTGGCTGGCAGTGGAGGACCTGAAA  1110
            ||||||||||.||||||||.||||||||||||||.||.||.|||||.||||||.|||||||||||||||||||.
Sbjct  986  AGTTCCTTAAGTTTCTAGAATCAGAATTCAGCTCAGAGAACTTAAGGTTCTGGTTGGCAGTGGAGGACCTGAAG  1059

Query 1111  AAGAGGCCTATTAAAGAAGTACCCTCAAGAGTTCAGGAAATATGGCAAGAGTTTCTGGCTCCCGGAGCCCCCAG  1184
            |..||||||||...|||.||.|||||.|||||.|||||||||||||||||.|||||||||||.||.||||||||
Sbjct 1060  AGAAGGCCTATCCGAGAGGTCCCCTCGAGAGTGCAGGAAATATGGCAAGAATTTCTGGCTCCTGGGGCCCCCAG  1133

Query 1185  TGCTATTAACTTGGATTCCAAGAGTTATGACAAAACCACACATAACGTGAAGGAACCTGGACGATACACATTTG  1258
            |||.||||||||||||||.||||||||||||||.||||||||.||.|||||||||||.||||||||||||||||
Sbjct 1134  TGCCATTAACTTGGATTCTAAGAGTTATGACAAGACCACACAGAATGTGAAGGAACCAGGACGATACACATTTG  1207

Query 1259  AAGATGCTCAGGAGCACATTTACAAACTGATGAAAAGTGATTCATACCCACGTTTTATAAGATCCAGTGCCTAT  1332
            ||||||||||||||||.||||||||.||||||||.||.||.||||||||.||.|||||||||||.||||||||.
Sbjct 1208  AAGATGCTCAGGAGCATATTTACAAGCTGATGAAGAGCGACTCATACCCCCGCTTTATAAGATCTAGTGCCTAC  1281

Query 1333  CAGGAGCTTCTACAGGCAAAGAAAAAGTCTGGAAACTCAATGGATCGCAGAACATCTTTTGAAAAATTTGCACA  1406
            |||||.||||||||||||||||.|||                                                
Sbjct 1282  CAGGAACTTCTACAGGCAAAGAGAAA------------------------------------------------  1307

Query 1407  GAATGTGGGGAAATCTCTCACGTCCAAGAGGTTAACAAGCCTTGCTCAGTCTTAC  1461
                  |||.|||.|||||||.||||||||||||||||||||||.||||||||||
Sbjct 1308  ------GGGAAAAACTCTCACATCCAAGAGGTTAACAAGCCTTGTTCAGTCTTAC  1356

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