Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06984
Subject:
NM_148955.4
Aligned Length:
1566
Identities:
1370
Gaps:
195

Alignment

Query    1  ATGGCGTCGGGTGGTGGTGGCTGTAGCGCTTCGGAGAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGTCGGGTGGTGGTGGCTGTAGCGCTTCGGAGAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTC  74

Query   75  CGAGGGGGCGGCCGGGGGATCAGAACCCGAGGCTGGGGACAGCGACACCGAGGGGGAGGACATTTTCACCGGCG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGAGGGGGCGGCCGGGGGATCAGAACCCGAGGCTGGGGACAGCGACACCGAGGGGGAGGACATTTTCACCGGCG  148

Query  149  CCGCGGTGGTCAGTAAACATCAGTCTCCAAAGATAACTACATCCCTTCTTCCCATCAACAATGGCTCCAAAGAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCGCGGTGGTCAGTAAACATCAGTCTCCAAAGATAACTACATCCCTTCTTCCCATCAACAATGGCTCCAAAGAA  222

Query  223  AATGGGATCCATGAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCTTGGA  296
            |||||||||||||||||||||||||||||||||||||||||||||||                           
Sbjct  223  AATGGGATCCATGAAGAACAAGACCAAGAGCCACAGGATCTCTTTGC---------------------------  269

Query  297  CAGCACACAAAATAATCAGAAGAAGGTGCTAGCCAAAACACTCATTTCTCTTCCTCCTCAGGAAGCCACAAATT  370
                                                                                      
Sbjct  270  --------------------------------------------------------------------------  269

Query  371  CTTCGAAGCCCCAGCCAACCTATGAGGAGCTAGAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGT  444
                                                                                      
Sbjct  270  --------------------------------------------------------------------------  269

Query  445  ATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCATATGTAGCCTACAAAGTTACAACACAGACAAGCTT  518
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  270  --------------------AGGGGATGGTATGAATGCATATGTAGCCTACAAAGTTACAACACAGACAAGCTT  323

Query  519  ACCATTGTTCAGAAGCAAACAGTTTGCAGTAAAAAGAAGATTTAGTGACTTTCTGGGTCTTTATGAGAAGCTTT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  324  ACCATTGTTCAGAAGCAAACAGTTTGCAGTAAAAAGAAGATTTAGTGACTTTCTGGGTCTTTATGAGAAGCTTT  397

Query  593  CCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCACCCCCGGAGAAGAGCCTCATAGGGATGACAAAAGTG  666
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  398  CCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAGTG  471

Query  667  AAAGTTGGGAAGGAAGATTCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCCGCTTTAGAAAGGTACCTTCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  472  AAAGTTGGGAAGGAAGATTCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCCGCTTTAGAAAGGTACCTTCA  545

Query  741  GAGGATTGTAAATCATCCTACCATGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAAAAGAAGAGCTGCCAC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  546  GAGGATTGTAAATCATCCTACCATGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAAAAGAAGAGCTGCCAC  619

Query  815  GTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGTCAGC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  620  GTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGTCAGC  693

Query  889  AAAATGACCATCAAGATGAATGAATCAGACATTTGGTTTGAGGAGAAGCTCCAGGAGGTAGAGTGTGAGGAGCA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  694  AAAATGACCATCAAGATGAATGAATCAGACATTTGGTTTGAGGAGAAGCTCCAGGAGGTAGAGTGTGAGGAGCA  767

Query  963  GCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAACACAGCCC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  768  GCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAACACAGCCC  841

Query 1037  AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  842  AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTG  915

Query 1111  GCTGAGGTGGAAGAAAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCTGAGCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  916  GCTGAGGTGGAAGAAAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCTGAGCT  989

Query 1185  CCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  990  CCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCT  1063

Query 1259  GGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGAT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1064  GGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGAT  1137

Query 1333  AAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTCGAGAG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138  AAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTCGAGAG  1211

Query 1407  GATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCACGTGA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1212  GATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCACGTGA  1285

Query 1481  TCAAGTACCTTGAGACACTCCTTTACTCACAGCAGCAGCTGGCAAAGTACTGGGAAGCCTTCCTTCCTGAGGCA  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1286  TCAAGTACCTTGAGACACTCCTTTACTCACAGCAGCAGCTGGCAAAGTACTGGGAAGCCTTCCTTCCTGAGGCA  1359

Query 1555  AAGGCCATCTCC  1566
            ||||||||||||
Sbjct 1360  AAGGCCATCTCC  1371

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