Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06984
Subject:
XR_001751380.1
Aligned Length:
2133
Identities:
1565
Gaps:
567

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGGTCTCCGCCCCTCGGATCCCACGGGGTCCCTTGCGGCCCTCCCACTCCTCGCACCGTTGGATCGCTTTGCTC  74

Query    1  --------------------------------------------------------ATGGCGTCGGGTGGTGGT  18
                                                                    ||||||||||||||||||
Sbjct   75  ACGGCGCTATCTCTCGATAAAGTTGTTGTTGCGGCTTCCGCCGCGGGTGGAAGAAGATGGCGTCGGGTGGTGGT  148

Query   19  GGCTGTAGCGCTTCGGAGAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTCCGAGGGGGCGGCCGGGGG  92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGCTGTAGCGCTTCGGAGAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTCCGAGGGGGCGGCCGGGGG  222

Query   93  ATCAGAACCCGAGGCTGGGGACAGCGACACCGAGGGGGAGGACATTTTCACCGGCGCCGCGGTGGTCAGTAAAC  166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCAGAACCCGAGGCTGGGGACAGCGACACCGAGGGGGAGGACATTTTCACCGGCGCCGCGGTGGTCAGTAAAC  296

Query  167  ATCAGTCTCCAAAGATAACTACATCCCTTCTTCCCATCAACAATGGCTCCAAAGAAAATGGGATCCATGAAGAA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATCAGTCTCCAAAGATAACTACATCCCTTCTTCCCATCAACAATGGCTCCAAAGAAAATGGGATCCATGAAGAA  370

Query  241  CAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATAATCA  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATAATCA  444

Query  315  GAAGAAGGTGCTAGCCAAAACACTCATTTCTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCCAGCCAA  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAAGAAGGTGCTAGCCAAAACACTCATTTCTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCCAGCCAA  518

Query  389  CCTATGAGGAGCTAGAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAG  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTATGAGGAGCTAGAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAG  592

Query  463  ATAGGGGATGGTATGAATGCATATGTAGCCTACAAAGTTACAACACAGACAAGCTTACCATTGTTCAGAAGCAA  536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATAGGGGATGGTATGAATGCATATGTAGCCTACAAAGTTACAACACAGACAAGCTTACCATTGTTCAGAAGCAA  666

Query  537  ACAGTTTGCAGTAAAAAGAAGATTTAGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGA  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACAGTTTGCAGTAAAAAGAAGATTTAGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGA  740

Query  611  ATGGCTTCATTGTCCCTCCACCCCCGGAGAAGAGCCTCATAGGGATGACAAAAGTGAAAGTTGGGAAGGAAGAT  684
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAGTGAAAGTTGGGAAGGAAGAT  814

Query  685  TCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCCGCTTTAGAAAGGTACCTTCAGAGGATTGTAAATCATCC  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCCGCTTTAGAAAGGTACCTTCAGAGGATTGTAAATCATCC  888

Query  759  TACCATGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAAAAGAAG---------------------------  805
            |||||||||||||||||||||||||||||||||||||||||||||||                           
Sbjct  889  TACCATGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAAAAGAAGAGGGGCAGCAGATAACTTGCCATCCCT  962

Query  806  ----------------AGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTT  863
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTT  1036

Query  864  CAACAAAGCCACAGATGCCGTCAGCAAAATGACCATCAAGATGAATGAATCAGACATTTGGTTTGAGGAGAAGC  937
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CAACAAAGCCACAGATGCCGTCAGCAAAATGACCATCAAGATGAATGAATCAGACATTTGGTTTGAGGAGAAGC  1110

Query  938  TCCAGGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGG  1011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCCAGGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGG  1184

Query 1012  AAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGC  1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGC  1258

Query 1086  ATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGAAGAAAAAATTGAGCAGCTCCACCAGGAACAGGCCAACA  1159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGAAGAAAAAATTGAGCAGCTCCACCAGGAACAGGCCAACA  1332

Query 1160  ATGACTTCTTCCTCCTTGCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGAC  1233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATGACTTCTTCCTCCTTGCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGAC  1406

Query 1234  CAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCG  1307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCG  1480

Query 1308  GCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGAGTCTCGGGTGA  1381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGAGTCTCGGGTGA  1554

Query 1382  CTCAATATGAAAGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAA  1455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTCAATATGAAAGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAA  1628

Query 1456  TCCAAGGACTTCAAGAACCACGTGATCAAGTACCTTGAGACACTCCTTTACTCACAGCAGCAGCTGGCAAAGTA  1529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCCAAGGACTTCAAGAACCACGTGATCAAGTACCTTGAGACACTCCTTTACTCACAGCAGCAGCTGGCAAAGTA  1702

Query 1530  CTGGGAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCC-------------------------------------  1566
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct 1703  CTGGGAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTGACG  1776

Query 1567  --------------------------------------------------------------------------  1566
                                                                                      
Sbjct 1777  CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGACTTAAC  1850

Query 1567  --------------------------------------------------------------------------  1566
                                                                                      
Sbjct 1851  CCCTTCCTCCCTGTCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATAT  1924

Query 1567  --------------------------------------------------------------------------  1566
                                                                                      
Sbjct 1925  TTTCTTACCTAAGAGAATAGTTTCCTGCTTTAAGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGT  1998

Query 1567  --------------------------------------------------------------------------  1566
                                                                                      
Sbjct 1999  GGAGTATTGATATAAATATATAAATACAAATGTATATTTTTCAGGATGTGGTTTAGGAACTGGGAATAACGTTT  2072

Query 1567  -------------------------------------------------------------  1566
                                                                         
Sbjct 2073  TCTGTTACTCCTGATGGTGCCATGAAAAGGTTATGTAATAAAATATTTTAAAATCAGGTCA  2133

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