Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07005
- Subject:
- XM_011520329.1
- Aligned Length:
- 3413
- Identities:
- 2128
- Gaps:
- 1264
Alignment
Query 1 ATGGCCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAGCAGGTCTCAGTCAGTCTCTCCACCTCCAGTTCTCTCCCCACCAAGGAGTCCCATCTACCCGCTCAGTGATA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCCAGCTCCCGGGTGCTCCTCAAGGACCGGCACCCCCCAGCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCTTCACCCCAGAATCCTCAAGATCCCTCCCCAGATACTTCCCCACCCACCTGTCCCTTCAAGACCGCCAGCTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGGTTATTTGGACAGAAGCCCTTCGGCGTGCAAGAGAGACGCCCAAAAGGAAAGTGTCCAAGGCGCAGCCCAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATGTAGCAGGGGTCGCTGCCTGCCTCCCCCTTGCCCAGAGCACGCCATTCCCGGGGCCAGCAGCTGGCCCCCGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCGTCTTGCTGACCCGTACCGGTACCCGCGCCCACAGCCTGGGCATCCGGGAGAAGATATCAGCATGGGAAGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCGCCGAGAGGCGTCGCCCAGGATGAGCATGTGTGGAGAGAAGCGGGAGGGCTCTGGGAGCGAGTGGGCGGCCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTGAGGGCTGCCCCAGCCTGGGCTGTCCCAGCGTGGTGCCGTCCCCCTGCAGCTCTGAAAAGACCTTTGATTTC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AAGGGCCTCCGGAGGATGAGCAGGACCTTCTCCGAGTGTTCCTACCCAGAGACTGAGGAGGAGGGAGAGGCGCT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CCCTGTCCGGGACTCTTTCTACCGGCTGGAGAAACGGCTGGGCCGGAGTGAGCCCAGCGCCTTCCTCAGGGGGC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 ATGGCAGCAGGAAGGAGAGCTCAGCAGTGCTGAGCCGGATCCAGAAAATTGAACAGGTCCTGAAGGAGCAGCCG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GGCCGGGGGCTCCCCCAGCTCCCCAGCAGCTGCTACAGCGTGGACCGGGGGAAAAGGAACACTGGAACCTTGGG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CTCCTTGGAGGAGCCGGCAGGGGGCGCGAGTGTGAGCGCTGGCAGCCGGGCAGTCGGAGTGGCTGGTGTTGCGG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 GGGAGGCGGGCCCACCCCCAGAGAGGGAAGGCAGTGGTTCCACTAAGCCCGGGACCCCTGGAAATAGCCCTAGC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 TCCCAGCGGCTGCCATCGAAGAGTTCCCTCGATCCCGCTGTGAACCCTGTCCCCAAACCCAAGCGCACCTTTGA 1184
.|||
Sbjct 1 ----------------------------------------------------------------------ATGA 4
Query 1185 ATACGAGGCTGACAAGAACCCCAAGAGTAAGCCCAGTAATGGTCTACCTCCTTCACCCAC--ACCTGCTGCTCC 1256
..|.|| |||.||| |||| ||..|||| |.|||||||| |.|||.||
Sbjct 5 CCATGA--CTGCCAA------CAAG---AATTCCAG--------------CATCACCCACGGAGCTGGTG---- 49
Query 1257 ACCTCCCTTGCCCTCCACCCCAGCCCCGCCAGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGCAAGT 1330
||.||..|.||| |.|||.| |.
Sbjct 50 ---------GCACTAAAGCCC--------------CTCGGGG------------------------------GA 70
Query 1331 CCCAGAGCAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCCACTGAG 1404
|.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 71 CTCTGAGCAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCCACTGAG 144
Query 1405 AATGGTACTGAGAACCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAAAATGCCTATGAAGATATTGTGGG 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 AATGGTACTGAGAACCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAAAATGCCTATGAAGATATTGTGGG 218
Query 1479 AGATCTGCCCAAGGAGAATCCATATGAGGATGTGGACTTAAAGAGCCGAAGAGCAGGACGAAAATCCCAGCAAC 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 219 AGATCTGCCCAAGGAGAATCCATATGAGGATGTGGACTTAAAGAGCCGAAGAGCAGGACGAAAATCCCAGCAAC 292
Query 1553 TGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCTCAGGACAGGAAGTACAACAGCCCGCCCACA 1626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 TGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCTCAGGACAGGAAGTACAACAGCCCGCCCACA 366
Query 1627 CAGCTTTCCCTGAAACCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCACCGGCTGCC 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 CAGCTTTCCCTGAAACCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCACCGGCTGCC 440
Query 1701 ACGATTACCCAAGAGGCACAGCCATGACGACATGCTGCTGCTGGCTCAGCTGAGTCTGCCGTCCTCACCCTCCA 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441 ACGATTACCCAAGAGGCACAGCCATGACGACATGCTGCTGCTGGCTCAGCTGAGTCTGCCGTCCTCACCCTCCA 514
Query 1775 GCCTCAATGAAGACAGCCTCAGCACCACCAGCGAGCTGCTGTCCAGCCGCCGGGCCCGCCGCATTCCCAAGCTT 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 515 GCCTCAATGAAGACAGCCTCAGCACCACCAGCGAGCTGCTGTCCAGCCGCCGGGCCCGCCGCATTCCCAAGCTT 588
Query 1849 GTCCAAAGAACTAACTCCATCTACAATGCCAAGAGAGGAAAGAAGAGATTAAAAAAGTTGTCTATGTCCAGCAT 1922
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 589 GTCCAAAGAATTAACTCCATCTACAATGCCAAGAGAGGAAAGAAGAGATTAAAAAAGTTGTCTATGTCCAGCAT 662
Query 1923 TGAAACAGCATCACTGAGAGATGAAAACAGTGAGAGCGAGAGCGACTCTGATGACAGGTTCAAAGCCCACACAC 1996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 TGAAACAGCATCACTGAGAGATGAAAACAGTGAGAGCGAGAGCGACTCTGATGACAGGTTCAAAGCCCACACAC 736
Query 1997 AGCGCCTGGTCCACATCCAGTCGATGCTGAAGCGCGCCCCCAGCTATCGCACGCTGGAGCTGGAGCTGCTGGAG 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 AGCGCCTGGTCCACATCCAGTCGATGCTGAAGCGCGCCCCCAGCTATCGCACGCTGGAGCTGGAGCTGCTGGAG 810
Query 2071 TGGCAGGAGCGGGAGCTTTTTGAGTACTTTGTGGTGGTGTCCCTCAAGAAGAAGCCATCGCGAAACACCTACCT 2144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 TGGCAGGAGCGGGAGCTTTTTGAGTACTTTGTGGTGGTGTCCCTCAAGAAGAAGCCATCGCGAAACACCTACCT 884
Query 2145 CCCCGAAGTCTCCTACCAGTTTCCCAAGCTGGACCGACCCACCAAGCAGATGCGAGAGGCAGAGGAAAGGCTCA 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 CCCCGAAGTCTCCTACCAGTTTCCCAAGCTGGACCGACCCACCAAGCAGATGCGAGAGGCAGAGGAAAGGCTCA 958
Query 2219 AAGCCATTCCCCAGTTTTGCTTCCCTGATGCCAAGGACTGGCTTCCTGTGTCAGAGTATAGCAGTGAGACCTTT 2292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 AAGCCATTCCCCAGTTTTGCTTCCCTGATGCCAAGGACTGGCTTCCTGTGTCAGAGTATAGCAGTGAGACCTTT 1032
Query 2293 TCTTTCATGCTGACTGGGGAAGATGGCGGCAGACGCTTTGGCTACTGCAGGCGCTTACTGCCAAGTGGGAAAGG 2366
|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 TCTTTCATGCTGACTGGGGAAGATGGCAGCAGACGCTTTGGCTACTGCAGGCGCTTACTGCCAAGTGGGAAAGG 1106
Query 2367 GCCCCGGTTGCCAGAGGTGTACTGTGTCATCAGCCGCCTTGGCTGCTTCGGCTTGTTTTCCAAGGTCCTAGATG 2440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 GCCCCGGTTGCCAGAGGTGTACTGTGTCATCAGCCGCCTTGGCTGCTTCGGCTTGTTTTCCAAGGTCCTAGATG 1180
Query 2441 AGGTGGAGCGCCGGCGTGGGATCTCCGCTGCATTGGTCTATCCTTTCATGAGAAGTCTCATGGAGTCGCCCTTC 2514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 AGGTGGAGCGCCGGCGTGGGATCTCCGCTGCATTGGTCTATCCTTTCATGAGAAGTCTCATGGAGTCGCCCTTC 1254
Query 2515 CCAGCCCCAGGGAAGACCATCAAAGTGAAGACATTCCTGCCAGGTGCTGGCAATGAGGTGTTAGAGCTGCGGCG 2588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 CCAGCCCCAGGGAAGACCATCAAAGTGAAGACATTCCTGCCAGGTGCTGGCAATGAGGTGTTAGAGCTGCGGCG 1328
Query 2589 GCCCATGGACTCAAGGCTGGAGCACGTGGACTTTGAGTGCCTTTTTACCTGCCTCAGTGTGCGCCAGCTCATCC 2662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 GCCCATGGACTCAAGGCTGGAGCACGTGGACTTTGAGTGCCTTTTTACCTGCCTCAGTGTGCGCCAGCTCATCC 1402
Query 2663 GAATCTTTGCCTCACTGCTGCTGGAGCGCCGGGTCATTTTTGTGGCAGATAAGCTCAGTACCCTCTCCAGCTGC 2736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1403 GAATCTTTGCCTCACTGCTGCTGGAGCGCCGGGTCATTTTTGTGGCAGATAAGCTCAGTACCCTCTCCAGCTGC 1476
Query 2737 TCCCACGCGGTGGTGGCCTTGCTCTACCCCTTCTCCTGGCAGCACACCTTCATTCCTGTCCTCCCGGCCTCCAT 2810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1477 TCCCACGCGGTGGTGGCCTTGCTCTACCCCTTCTCCTGGCAGCACACCTTCATTCCTGTCCTCCCGGCCTCCAT 1550
Query 2811 GATTGACATCGTCTGCTGTCCCACCCCCTTCCTGGTTGGCCTGCTCTCCAGCTCCCTCCCCAAACTGAAGGAGC 2884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 GATTGACATCGTCTGCTGTCCCACCCCCTTCCTGGTTGGCCTGCTCTCCAGCTCCCTCCCCAAACTGAAGGAGC 1624
Query 2885 TGCCTGTGGAGGAGGCGCTGATGGTGAATCTGGGATCTGACCGATTCATCCGACAGATGGACGACGAAGACACG 2958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1625 TGCCTGTGGAGGAGGCGCTGATGGTGAATCTGGGATCTGACCGATTCATCCGACAGATGGACGACGAAGACACG 1698
Query 2959 TTGTTACCTAGGAAGTTACAGGCAGCTCTGGAGCAGGCTCTGGAGAGGAAGAATGAGCTGATCTCCCAGGACTC 3032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1699 TTGTTACCTAGGAAGTTACAGGCAGCTCTGGAGCAGGCTCTGGAGAGGAAGAATGAGCTGATCTCCCAGGACTC 1772
Query 3033 TGACAGCGACTCCGACGATGAATGTAATACCCTCAATGGGCTGGTGTCGGAGGTGTTTATCCGGTTCTTTGTGG 3106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1773 TGACAGCGACTCCGACGATGAATGTAATACCCTCAATGGGCTGGTGTCGGAGGTGTTTATCCGGTTCTTTGTGG 1846
Query 3107 AGACCGTTGGGCACTACTCCCTCTTTCTGACACAGAGTGAGAAGGGAGAGAGGGCCTTTCAGCGAGAGGCCTTC 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1847 AGACCGTTGGGCACTACTCCCTCTTTCTGACACAGAGTGAGAAGGGAGAGAGGGCCTTTCAGCGAGAGGCCTTC 1920
Query 3181 CGCAAATCTGTGGCCTCCAAAAGCATCCGCCGCTTTCTTGAGGTTTTTATGGAGTCTCAGATGTTTGCTGGCTT 3254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 CGCAAATCTGTGGCCTCCAAAAGCATCCGCCGCTTTCTTGAGGTTTTTATGGAGTCTCAGATGTTTGCTGGCTT 1994
Query 3255 CATCCAAGACAGGGAGCTAAGAAAGTGTCGGGCAAAGGGCCTTTTTGAGCAGCGAGTGGAGCAGTACTTAGAAG 3328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1995 CATCCAAGACAGGGAGCTAAGAAAGTGTCGGGCAAAGGGCCTTTTTGAGCAGCGAGTGGAGCAGTACTTAGAAG 2068
Query 3329 AACTCCCAGACACTGAGCAGAGTGGAATGAATAAGTTTCTCCGAGGTTTGGGCAACAAAATGAAGTTTCTCCAC 3402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2069 AACTCCCAGACACTGAGCAGAGTGGAATGAATAAGTTTCTCCGAGGTTTGGGCAACAAAATGAAGTTTCTCCAC 2142
Query 3403 AAGAAGAAT 3411
|||||||||
Sbjct 2143 AAGAAGAAT 2151
