Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07106
• Subject: NM_001172073.1
• Aligned Length: 1164
• Identities: 873
• Gaps: 144

Alignment

Query    1  ATGGAACAACCTGGGCAGGATCCCACCTCAGACGACGTCATGGACTCGTTCCTGGAAAAGTTCCAGAGCCAGCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTACCGTGGCGGCTTTCATGAGGACCAGTGGGAGAAGGAATTTGAAAAGGTCCCCCTATTTATGACGAGAGCGC  148
                                                                         ||||..|.|||||
Sbjct    1  -------------------------------------------------------------ATGAAAAAAGCGC  13

Query  149  CATCAGAAATTGATCCCAGGGAGAATCCTGACTTGGCTTGTCTCCAGTCAATTATTTTTGATGAGGAGCGTTCT  222
            |||||||||||||.|||..||||..||||||||||||.||.||||||||.||.|||||||||||.||.||.|.|
Sbjct   14  CATCAGAAATTGACCCCGAGGAGTTTCCTGACTTGGCCTGCCTCCAGTCGATGATTTTTGATGATGATCGATAT  87

Query  223  CCAGAAGAACAGGCCAAGACCTATAAAGATGAGGGCAATGATTACTTTAAAGAAAAAGACTACAAGAAAGCTGT  296
            ||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||
Sbjct   88  CCAGAAGAGCAAGCCAAGACCTATAAAGATGAGGGCAATGACTACTTTAAAGAAAAAGACTATAAGAAAGCTGT  161

Query  297  AATTTCATACACTGAAGGCTTAAAGAAGAAATGTGCAGATCCTGATTTGAATGCTGTCCTTTATACCAACCGGG  370
            ..|||||||||.||||||.||.||||||||.||||||||.||||||||||||||||||||.|||||||||||||
Sbjct  162  GCTTTCATACAGTGAAGGGTTGAAGAAGAAGTGTGCAGACCCTGATTTGAATGCTGTCCTGTATACCAACCGGG  235

Query  371  CAGCAGCACAGTACTATCTGGGCAATTTTCGTTCTGCTCTCAATGATGTGACAGCTGCCAGAAAGCTAAAACCC  444
            |||||||||||||||||||.||||||.||||||||.|.||||||||||||...|||||||..||||||||.|||
Sbjct  236  CAGCAGCACAGTACTATCTCGGCAATGTTCGTTCTTCCCTCAATGATGTGCTGGCTGCCAAGAAGCTAAAGCCC  309

Query  445  TGCCACCTCAAAGCAATAATAAGAGGTGCCTTATGCCATCTGGAACTGAAACACTTTGCCGAGGCCGTGAACTG  518
            .|.|||||.|||||.||.||||||||||||.|.||||||||.|||||||||||||||||.|||||.||||||||
Sbjct  310  GGTCACCTGAAAGCCATCATAAGAGGTGCCCTGTGCCATCTTGAACTGAAACACTTTGCTGAGGCTGTGAACTG  383

Query  519  GTGTGATGAGGGACTGCAAATAGATGCCAAAGAGAAGAAGCTTCTGGAAATGAGGGCTAAAGCAGACAAGCTGA  592
            |||||||||||||||.|||||.|||||||||||||||||.|||||.|||||.|||||.||||||||||||||.|
Sbjct  384  GTGTGATGAGGGACTACAAATTGATGCCAAAGAGAAGAAACTTCTAGAAATAAGGGCAAAAGCAGACAAGCTAA  457

Query  593  AGCGAATTGAACAGAGGGATGTGAGGAAAGCCAACTTGAAAGAAAAGAAGGAGAGGAATCAGAATGAGGCTTTA  666
            ||.|.||.|||.||||||||.|||||||.||.||.|||||||||||||||||...|.||||||||||||||.|.
Sbjct  458  AGAGGATGGAAGAGAGGGATCTGAGGAAGGCAAAGTTGAAAGAAAAGAAGGAACAGCATCAGAATGAGGCTCTG  531

Query  667  CTCCAGGCCATCAAGGCTAGGAATATCAGGC---TCTCAGAAGCTGCCTGTGAGGATGAAGATTCAGCCTCAGA  737
            |||||||||||||||||||||||.|||||||   ||||.|||.|.|||.||||||||||||||||||||||..|
Sbjct  532  CTCCAGGCCATCAAGGCTAGGAACATCAGGCTTGTCTCTGAATCAGCCGGTGAGGATGAAGATTCAGCCTCCAA  605

Query  738  AGGTCTAGGTGAGCTTTTCCTGGATGGACTCAGCACTGAGAACCCCCATGGAGCCAGGCTGAGTCTAGATGGCC  811
            .||||.||.||||.|..||||||||||.||||||.|||||||||||.|||||||||||||.|||.||||||.||
Sbjct  606  TGGTCCAGCTGAGATACTCCTGGATGGGCTCAGCTCTGAGAACCCCTATGGAGCCAGGCTAAGTATAGATGACC  679

Query  812  AGGGCAGGCTGAGCTGGCCTGTGCTCTTTCTGTACCCAGAGTATGCCCAGTCGGACTTCATCTCTGCTTTTCAT  885
            |||||||||||||||||||||||||.||.||||||||.|||||.||.||.||.|||||||||||||||||||||
Sbjct  680  AGGGCAGGCTGAGCTGGCCTGTGCTGTTCCTGTACCCGGAGTACGCGCAATCAGACTTCATCTCTGCTTTTCAT  753

Query  886  GAGGACTCCAGGTTTATTGATCATCTAATGGTGATGTTTGGTGAAACACCCTCTTGGGACCTAGAGCAAAAATA  959
            ||||||.|||||||||||||.||||||||||.|||||||.|||||.|||||||.||||||..||||||.||.||
Sbjct  754  GAGGACACCAGGTTTATTGACCATCTAATGGCGATGTTTAGTGAAGCACCCTCCTGGGACTCAGAGCACAAGTA  827

Query  960  TTGCCCTGATAATTTGGAGGTCTACTTTGAGGATGAGGACAGGGCAGAACTATACCGGGTGCCTGCCAAGAGCA  1033
            ...|||.||.|||.|||||||||||||.|||||||||||||||||.||||||||||.||||.||.||.|.||||
Sbjct  828  CCACCCAGAGAATCTGGAGGTCTACTTCGAGGATGAGGACAGGGCGGAACTATACCAGGTGTCTCCCGATAGCA  901

Query 1034  CCTTGCTACAGGTTCTACAGCACCAGAGGTACTTTGTAAAAGCCCTGACACCAGCATTTTTGGTCTGTGTAGGA  1107
            ||.||.|.|||||.||.|||||||..||||.||..||.||.|||||.||.||.|||||..||||||||||||||
Sbjct  902  CCCTGTTGCAGGTGCTGCAGCACCCCAGGTGCTGCGTGAAGGCCCTTACCCCGGCATTCCTGGTCTGTGTAGGA  975

Query 1108  TCCTCTCCTTTTTGCAAGAATTTTCTCCGGGGGAGAAAGGTGTACCAGATACGA  1161
            |||||.|||||.||.|.|||||..||||.|||||..||||||.||..|      
Sbjct  976  TCCTCGCCTTTCTGTAGGAATTACCTCCAGGGGAAGAAGGTGCACAGG------  1023