Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07127
Subject:
NM_009506.2
Aligned Length:
1257
Identities:
1091
Gaps:
12

Alignment

Query    1  ATGCACTTGCTGGGCTTCTTCTCTGTGGCGTGTTCTCTGCTCGCCGCTGCGCTGCTCCCGGGTCCTCGCGAGGC  74
            ||||||||||||.|||||||.|||.||||||||||.||||||||||||||||||.||||..||||.||||||||
Sbjct    1  ATGCACTTGCTGTGCTTCTTGTCTCTGGCGTGTTCCCTGCTCGCCGCTGCGCTGATCCCCAGTCCGCGCGAGGC  74

Query   75  GCCCGCCGCCGCCGCCGCCTTCGAGTCCGGACTCGACCTCTCGGACGCGGAGCCCGACGCGGGCGAGGCCACGG  148
            |||||||.|||.|||||||||||||||.|||||.|.|.|||||||.|||||||||||||.||||||||.||.||
Sbjct   75  GCCCGCCACCGTCGCCGCCTTCGAGTCGGGACTGGGCTTCTCGGAAGCGGAGCCCGACGGGGGCGAGGTCAAGG  148

Query  149  CTTATGCAAGCAAAGATCTGGAGGAGCAGTTACGGTCTGTGTCCAGTGTAGATGAACTCATGACTGTACTCTAC  222
            |||.||.|.|||||||.||||||||||||||.||||||||||||||.||||||||.||.|||.||||.||.|||
Sbjct  149  CTTTTGAAGGCAAAGACCTGGAGGAGCAGTTGCGGTCTGTGTCCAGCGTAGATGAGCTGATGTCTGTCCTGTAC  222

Query  223  CCAGAATATTGGAAAATGTACAAGTGTCAGCTAAGGAAAGGAGGCTGGCAACATAACAGAGAACAGGCCAACCT  296
            |||||.||.|||||||||||||||||.|||||..|||||||.|||||||            |.|||.|||.|||
Sbjct  223  CCAGACTACTGGAAAATGTACAAGTGCCAGCTGCGGAAAGGCGGCTGGC------------AGCAGCCCACCCT  284

Query  297  CAACTCAAGGACAGAAGAGACTATAAAATTTGCTGCAGCACATTATAATACAGAGATCTTGAAAAGTATTGATA  370
            |||..|.|||||||..||.|.|.|||||||||||||.|||||||||||.|||||||||.|||||||||||||||
Sbjct  285  CAATACCAGGACAGGGGACAGTGTAAAATTTGCTGCTGCACATTATAACACAGAGATCCTGAAAAGTATTGATA  358

Query  371  ATGAGTGGAGAAAGACTCAATGCATGCCACGGGAGGTGTGTATAGATGTGGGGAAGGAGTTTGGAGTCGCGACA  444
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||..||.|||
Sbjct  359  ATGAGTGGAGAAAGACTCAATGCATGCCACGTGAGGTGTGTATAGATGTGGGGAAGGAGTTTGGAGCAGCCACA  432

Query  445  AACACCTTCTTTAAACCTCCATGTGTGTCCGTCTACAGATGTGGGGGTTGCTGCAATAGTGAGGGGCTGCAGTG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  433  AACACCTTCTTTAAACCTCCATGTGTGTCCGTCTACAGATGTGGGGGTTGCTGCAACAGCGAGGGGCTGCAGTG  506

Query  519  CATGAACACCAGCACGAGCTACCTCAGCAAGACGTTATTTGAAATTACAGTGCCTCTCTCTCAAGGCCCCAAAC  592
            |||||||||||||||..|.|||||||||||||||||.|||||||||||||||||||||||.|||||||||||||
Sbjct  507  CATGAACACCAGCACAGGTTACCTCAGCAAGACGTTGTTTGAAATTACAGTGCCTCTCTCACAAGGCCCCAAAC  580

Query  593  CAGTAACAATCAGTTTTGCCAATCACACTTCCTGCCGATGCATGTCTAAACTGGATGTTTACAGACAAGTTCAT  666
            ||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  581  CAGTCACAATCAGTTTTGCCAATCACACTTCCTGCCGGTGCATGTCTAAACTGGATGTTTACAGACAAGTTCAT  654

Query  667  TCCATTATTAGACGTTCCCTGCCAGCAACACTACCACAGTGTCAGGCAGCGAACAAGACCTGCCCCACCAATTA  740
            ||.||||||||||||||.||||||||||||.|||||||||||||||||||.||||||||.||.||.||.||.||
Sbjct  655  TCAATTATTAGACGTTCTCTGCCAGCAACATTACCACAGTGTCAGGCAGCTAACAAGACATGTCCAACAAACTA  728

Query  741  CATGTGGAATAATCACATCTGCAGATGCCTGGCTCAGGAAGATTTTATGTTTTCCTCGGATGCTGGAGATGACT  814
            ..||||||||||..||||.|||.||||||||||||||.|.||||||||.||||..||..|||.||.||||||||
Sbjct  729  TGTGTGGAATAACTACATGTGCCGATGCCTGGCTCAGCAGGATTTTATCTTTTATTCAAATGTTGAAGATGACT  802

Query  815  CAACAGATGGATTCCATGACATCTGTGGACCAAACAAGGAGCTGGATGAAGAGACCTGTCAGTGTGTCTGCAGA  888
            ||||..|||||||||||||..||||||||||.||||||||||||||||||||.|||||||||||||||||||..
Sbjct  803  CAACCAATGGATTCCATGATGTCTGTGGACCCAACAAGGAGCTGGATGAAGACACCTGTCAGTGTGTCTGCAAG  876

Query  889  GCGGGGCTTCGGCCTGCCAGCTGTGGACCCCACAAAGAACTAGACAGAAACTCATGCCAGTGTGTCTGTAAAAA  962
            |.||||||||||||..|.||.|||||||||||||||||||||||.|||.|||||||.|||||||||||||||||
Sbjct  877  GGGGGGCTTCGGCCATCTAGTTGTGGACCCCACAAAGAACTAGATAGAGACTCATGTCAGTGTGTCTGTAAAAA  950

Query  963  CAAACTCTTCCCCAGCCAATGTGGGGCCAACCGAGAATTTGATGAAAACACATGCCAGTGTGTATGTAAAAGAA  1036
            ||||||.|||||.|....||||||.||||||.|.|||||||||||.||.|||||.|||||||||||||||||||
Sbjct  951  CAAACTTTTCCCTAATTCATGTGGAGCCAACAGGGAATTTGATGAGAATACATGTCAGTGTGTATGTAAAAGAA  1024

Query 1037  CCTGCCCCAGAAATCAACCCCTAAATCCTGGAAAATGTGCCTGTGAATGTACAGAAAGTCCACAGAAATGCTTG  1110
            |.||.||.||||||||.|||||.||||||||.|||||||||||||||||||||||||...|||||||.|||||.
Sbjct 1025  CGTGTCCAAGAAATCAGCCCCTGAATCCTGGGAAATGTGCCTGTGAATGTACAGAAAACACACAGAAGTGCTTC  1098

Query 1111  TTAAAAGGAAAGAAGTTCCACCACCAAACATGCAGCTGTTACAGACGGCCATGTACGAACCGCCAGAAGGCTTG  1184
            .|.|||||.||||||||||||||.|||||||||||.|||||||||.|.||.|||.||||.||.|.||||..|||
Sbjct 1099  CTTAAAGGGAAGAAGTTCCACCATCAAACATGCAGTTGTTACAGAAGACCGTGTGCGAATCGACTGAAGCATTG  1172

Query 1185  TGAGCCAGGATTTTCATATAGTGAAGAAGTGTGTCGTTGTGTCCCTTCATATTGGCAAAGACCACAAATGAGC  1257
            |||.||||||.|.||.|.||||||||||||.||.||.||||||||.||.||||||.||||.|||||..|||.|
Sbjct 1173  TGATCCAGGACTGTCCTTTAGTGAAGAAGTATGCCGCTGTGTCCCATCGTATTGGAAAAGGCCACATCTGAAC  1245

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