Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07140
• Subject: NR_148950.2
• Aligned Length: 3650
• Identities: 2657
• Gaps: 991

Alignment

Query    1  ---------------------------------ATGGCTCGGAAACGCGCGGCCGGCGGGGAGCCGCGGGGACG  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ACTCGCGAAGTGGAATTTGCCCAGACAAGCAACATGGCTCGGAAACGCGCGGCCGGCGGGGAGCCGCGGGGACG  74

Query   42  CGAACTGCGCAGCCAGAAATCCAAGGCCAAGAGCAAGGCCCGGCGTGAGGAGGAGGAGGAGGATGCCTTTGAAG  115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGAACTGCGCAGCCAGAAATCCAAGGCCAAGAGCAAGGCCCGGCGTGAGGAGGAGGAGGAGGATGCCTTTGAAG  148

Query  116  ATGAGAAACCCCCAAAGAAGAGCCTTCTCTCCAAAGTTTCACAAGGAAAGAGGAAAAGAGGCTGCAGTCATCCT  189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATGAGAAACCCCCAAAGAAGAGCCTTCTCTCCAAAGTTTCACAAGGAAAGAGGAAAAGAGGCTGCAGTCATCCT  222

Query  190  GGGGGTTCAGCAGATGGTCCAGCAAAAAAGAAAGTGGCCAAGGTGACTGTTAAATCTGAAAACCTCAAGGTTAT  263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGGGTTCAGCAGATGGTCCAGCAAAAAAGAAAGTGGCCAAGGTGACTGTTAAATCTGAAAACCTCAAGGTTAT  296

Query  264  AAAGGATGAAGCCCTCAGCGATGGGGATGACCTCAGGGACTTTCCAAGTGACCTCAAGAAGGCACACCATCTGA  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAAGGATGAAGCCCTCAGCGATGGGGATGACCTCAGGGACTTTCCAAGTGACCTCAAGAAGGCACACCATCTGA  370

Query  338  AGAGAGGGGCTACCATGAATGAAGACAGCAATGAAGAAGAGGAAGAAAGTGAAAATGATTGGGAAGAGGTTGAA  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGAGAGGGGCTACCATGAATGAAGACAGCAATGAAGAAGAGGAAGAAAGTGAAAATGATTGGGAAGAGGTTGAA  444

Query  412  GAACTTAGTGAGCCTGTGCTGGGTGACGTGAGAGAAAGTACAGCCTTCTCTCGATCTCTTCTGCCTGTGAAGCC  485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAACTTAGTGAGCCTGTGCTGGGTGACGTGAGAGAAAGTACAGCCTTCTCTCGATCTCTTCTGCCTGTGAAGCC  518

Query  486  AGTGGAGATAGAGATTGAAACGCCAGAGCAGGCGAAGACAAGAGAAAGAAGTGAAAAGATAAAACTGGAGTTTG  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGTGGAGATAGAGATTGAAACGCCAGAGCAGGCGAAGACAAGAGAAAGAAGTGAAAAGATAAAACTGGAGTTTG  592

Query  560  AGACATATCTTCGGAGGGCGATGAAACGTTTCAATAAAGGGGTCCATGAGGACACACACAAGGTTCACCTTCTC  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGACATATCTTCGGAGGGCGATGAAACGTTTCAATAAAGGGGTCCATGAGGACACACACAAGGTTCACCTTCTC  666

Query  634  TGCCTGCTAGCAAATGGCTTCTATCGAAATAACATCTGCAGCCAGCCAGATCTGCATGCTATTGGCCTGTCCAT  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGCCTGCTAGCAAATGGCTTCTATCGAAATAACATCTGCAGCCAGCCAGATCTGCATGCTATTGGCCTGTCCAT  740

Query  708  CATCCCAGCCCGCTTTACCAGAGTGCTGCCTCGAGATGTGGACACCTACTACCTCTCAAACCTGGTGAAGTGGT  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CATCCCAGCCCGCTTTACCAGAGTGCTGCCTCGAGATGTGGACACCTACTACCTCTCAAACCTGGTGAAGTGGT  814

Query  782  TCATTGGAACATTTACAGTTAATGCAGAACTTTCAGCCAGTGAACAAGATAACCTGCAGACTACATTGGAAAGG  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCATTGGAACATTTACAGTTAATGCAGAACTTTCAGCCAGTGAACAAGATAACCTGCAGACTACATTGGAAAGG  888

Query  856  AGATTTGCTATTTACTCTGCTCGAGATGATGAGGAATTGGTCCATATATTCTTACTGATTCTCCGGGCTCTGCA  929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGATTTGCTATTTACTCTGCTCGAGATGATGAGGAATTGGTCCATATATTCTTACTGATTCTCCGGGCTCTGCA  962

Query  930  GCTCTTGACCCGGCTGGTATTGTCTCTACAGCCAATTCCTCTGAAGTCAGCAACAGCAAAGGGAAAGAAACCTT  1003
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCTCTTGACCCGGCTGGTATTGTCTCTACAGCCAATTCCTCTGAAGTCAGCAACAGCAAAGGGAAAGAAACCTT  1036

Query 1004  CCAAGGAAAGATTGACTGCGGATCCAGGAGGCTCCTCAGAAACTTCCAGCCAAGTTCTAGAAAACCACACCAAA  1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCAAGGAAAGATTGACTGCGGATCCAGGAGGCTCCTCAGAAACTTCCAGCCAAGTTCTAGAAAACCACACCAAA  1110

Query 1078  CCAAAGACCAGCAAAGGAACCAAACAAGAGGAAACCTTTGCTAAGGGCACCTGCAGGCCAAGTGCCAAAGGGAA  1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCAAAGACCAGCAAAGGAACCAAACAAGAGGAAACCTTTGCTAAGGGCACCTGCAGGCCAAGTGCCAAAGGGAA  1184

Query 1152  GAGGAACAAGGGAGGCAGAAAGAAACGGAGCAAGCCCTCCTCCAGCGAGGAAGATGAGGGCCCAGGAGACAAGC  1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAGGAACAAGGGAGGCAGAAAGAAACGGAGCAAGCCCTCCTCCAGCGAGGAAGATGAGGGCCCAGGAGACAAGC  1258

Query 1226  AGGAGAAGGCAACCCAGCGACGTCCGCATGGCCGGGAGCGGCGGGTGGCCTCCAGGGTGTCTTATAAAGAGGAG  1299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGGAGAAGGCAACCCAGCGACGTCCGCATGGCCGGGAGCGGCGGGTGGCCTCCAGGGTGTCTTATAAAGAGGAG  1332

Query 1300  AGTGGGAGTGATGAGGCTGGCAGCGGCTCTGATTTTGAGCTCTCCAGTGGAGAAGCCTCTGATCCCTCTGATGA  1373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGTGGGAGTGATGAGGCTGGCAGCGGCTCTGATTTTGAGCTCTCCAGTGGAGAAGCCTCTGATCCCTCTGATGA  1406

Query 1374  GGATTCCGAACCTGGCCCTCCAAAGCAGAGGAAAGCCCCCGCTCCTCAGAGGACAAAGGCTGGGTCCAAGAGTG  1447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGATTCCGAACCTGGCCCTCCAAAGCAGAGGAAAGCCCCCGCTCCTCAGAGGACAAAGGCTGGGTCCAAGAGTG  1480

Query 1448  CCTCCAGGACCCATCGTGGGAGCCATCGTAAGGACCCAAGCTTGCCAGCGGCATCCTCAAGCTCTTCAAGCAGT  1521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCTCCAGGACCCATCGTGGGAGCCATCGTAAGGACCCAAGCTTGCCAGCGGCATCCTCAAGCTCTTCAAGCAGT  1554

Query 1522  AAAAGAGGCAAGAAAATGTGCAGCGATGGTGAGAAGGCAGAAAAAAGAAGCATAGCTGGTATAGACCAGTGGCT  1595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AAAAGAGGCAAGAAAATGTGCAGCGATGGTGAGAAGGCAGAAAAAAGAAGCATAGCTGGTATAGACCAGTGGCT  1628

Query 1596  AGAGGTGTTCTGTGAGCAGGAGGAAAAGTGGGTATGTGTAGACTGTGTGCACGGTGTGGTGGGCCAGCCTCTGA  1669
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGAGGTGTTCTGTGAGCAGGAGGAAAAGTGGGTATGTGTAGACTGTGTGCACGGTGTGGTGGGCCAGCCTCTGA  1702

Query 1670  CCTGTTACAAGTACGCCACCAAGCCCATGACCTATGTGGTGGGCATTGACAGTGACGGCTGGGTCCGAGATGTC  1743
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CCTGTTACAAGTACGCCACCAAGCCCATGACCTATGTGGTGGGCATTGACAGTGACGGCTGGGTCCGAGATGTC  1776

Query 1744  ACACAGAGGTACGACCCAGTCTGGATGACAGTGACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCCGAGAC  1817
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACACAGAGGTACGACCCAGTCTGGATGACAGTGACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCCGAGAC  1850

Query 1818  CTTGAGACCATACCAGAGCCCATTTATGGACAGGGAGAAGAAAGAAGACTTGGAGTTTCAGGCAAAACACATGG  1891
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                     
Sbjct 1851  CTTGAGACCATACCAGAGCCCATTTATGGACAGGGAGAAGAAAGAAGACTTGG---------------------  1903

Query 1892  ACCAGCCTTTGCCCACTGCCATTGGCTTATATAAGAACCACCCTCTGTATGCCCTGAAGCGGCATCTCCTGAAA  1965
                                                                                      
Sbjct 1904  --------------------------------------------------------------------------  1903

Query 1966  TATGAGGCCATCTATCCCGAGACAGCTGCCATCCTTGGGTATTGTCGTGGAGAAGCGGTCTACTCCAGGGATTG  2039
                                                                              ||||||||
Sbjct 1904  ------------------------------------------------------------------AGGGATTG  1911

Query 2040  TGTGCACACTCTGCATTCCAGAGACACGTGGCTGAAGAAAGCAAGAGTGGTGAGGCTTGGAGAAGTACCCTACA  2113
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1912  TGTGCACACTCTGCATTCCAGGGACACGTGGCTGAAGAAAGCAAGAGTGGTGAGGCTTGGAGAAGTACCCTACA  1985

Query 2114  AGATGGTGAAAGGCTTTTCTAACCGTGCTCGGAAAGCCCGACTTGCTGAGCCCCAGCTGCGGGAAGAAAATGAC  2187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1986  AGATGGTGAAAGGCTTTTCTAACCGTGCTCGGAAAGCCCGACTTGCTGAGCCCCAGCTGCGGGAAGAAAATGAC  2059

Query 2188  CTGGGCCTGTTTGGCTACTGGCAGACAGAGGAGTATCAGCCCCCAGTGGCCGTGGACGGGAAGGTGCCCCGGAA  2261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2060  CTGGGCCTGTTTGGCTACTGGCAGACAGAGGAGTATCAGCCCCCAGTGGCCGTGGACGGGAAGGTGCCCCGGAA  2133

Query 2262  CGAGTTTGGGAATGTGTACCTCTTCCTGCCCAGCATGATGCCTATTGGCTGTGTCCAGCTGAACCTGCCCAATC  2335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2134  CGAGTTTGGGAATGTGTACCTCTTCCTGCCCAGCATGATGCCTATTGGCTGTGTCCAGCTGAACCTGCCCAATC  2207

Query 2336  TACACCGCGTGGCCCGCAAGCTGGACATCGACTGTGTCCAGGCCATCACTGGCTTTGATTTCCATGGCGGCTAC  2409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2208  TACACCGCGTGGCCCGCAAGCTGGACATCGACTGTGTCCAGGCCATCACTGGCTTTGATTTCCATGGCGGCTAC  2281

Query 2410  TCCCATCCCGTGACTGATGGATACATCGTCTGCGAGGAATTCAAAGACGTGCTCCTGACTGCCTGGGAAAATGA  2483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2282  TCCCATCCCGTGACTGATGGATACATCGTCTGCGAGGAATTCAAAGACGTGCTCCTGACTGCCTGGGAAAATGA  2355

Query 2484  GCAGGCAGTCATTGAAAGGAAGGAGAAGGAGAAAAAGGAGAAGCGGGCTCTAGGGAACTGGAAGTTGCTGGCCA  2557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2356  GCAGGCAGTCATTGAAAGGAAGGAGAAGGAGAAAAAGGAGAAGCGGGCTCTAGGGAACTGGAAGTTGCTGGCCA  2429

Query 2558  AAGGTCTGCTCATCAGGGAGAGGCTGAAGCGTCGCTACGGGCCCAAGAGTGAGGCAGCAGCTCCCCACACAGAT  2631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2430  AAGGTCTGCTCATCAGGGAGAGGCTGAAGCGTCGCTACGGGCCCAAGAGTGAGGCAGCAGCTCCCCACACAGAT  2503

Query 2632  GCAGGAGGTGGACTCTCTTCTGATGAAGAGGAGGGGACCAGCTCTCAAGCAGAAGCGGCCAGGATACTGGCTGC  2705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2504  GCAGGAGGTGGACTCTCTTCTGATGAAGAGGAGGGGACCAGCTCTCAAGCAGAAGCGGCCAGGATACTGGCTGC  2577

Query 2706  CTCCTGGCCTCAAAACCGAGAAGATGAAGAAAAGCAGAAGCTGAAGGGTGGGCCCAAGAAGACCAAAAGGGAAA  2779
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2578  CTCCTGGCCTCAAAACCGAGAAGATGAAGAAAAGCAGAAGCTGAAGGGTGGGCCCAAGAAGACCAAAAGGGAAA  2651

Query 2780  AGAAAGCAGCAGCTTCCCACCTGTTCCCATTTGAGAAGCTG---------------------------------  2820
            |||||||||||||||||||||||||||||||||||.|||||                                 
Sbjct 2652  AGAAAGCAGCAGCTTCCCACCTGTTCCCATTTGAGCAGCTGTGAGCTGAGCGCCCACTAGAGGGGCACCCACCA  2725

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 2726  GTTGCTGCTGCCCCACTACAGGCCCCACACCTGCCCTGGGCATGCCCAGCCCCTGGTGGTGGGGGCTTCTCTGC  2799

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 2800  TGAGAAGGCAAACTGAGGCAGCATGCACGGAGGCGGGGTCAGGGGAGACGAGGCCAAGCTGAGGAGGTGCTGCA  2873

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 2874  GGTCCCGTCTGGCTCCAGCCCTTGTCAGATTCACCCAGGGTGAAGCCTTCAAAGCTTTTTGCTACCAAAGCCCA  2947

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 2948  CTCACCCTTTGAGCTACAGAACACTTTGCTAGGAGATACTCTTCTGCCTCCTAGACCTGTTCTTTCCATCTTTA  3021

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3022  GAAACATCAGTTTTTGTATGGAAGCCACCGGGAGATTTCTGGATGGTGGTGCATCCGTGAATGCGCTGATCGTT  3095

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3096  TCTTCCAGTTAGAGTCTTCATCTGTCCGACAAGTTCACTCGCCTCGGTTGCGGACCTAGGACCATTTCTCTGCA  3169

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3170  GGCCACTTACCTTCCCCTGAGTCAGGCTTACTAATGCTGCCCTCACTGCCTCTTTGCAGTAGGGGAGAGAGCAG  3243

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3244  AGAAGTACAGGTCATCTGCTGGGATCTAGTTTTCCAAGTAACATTTTGTGGTGACAGAAGCCTAAAAAAAGCTA  3317

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3318  AAATCAGGAAAGAAAAGGAAAAATACGAATTGAAAATTAAGGAAATGTTAGTAAAATAGATGAGTGTTAAACTA  3391

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3392  GATTGTATTCATTACTAGATAAAATGTATAAAGCTCTCTGTACTAAGGAGAAATGACTTTTATAACATTTTGAG  3465

Query 2821  ------------------------  2820
                                    
Sbjct 3466  AAAATAATAAAGCATTTATCTAAA  3489