Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07155
Subject:
NM_001256279.2
Aligned Length:
1698
Identities:
1597
Gaps:
99

Alignment

Query    1  ATGGCCACCAGTTTCCGGACAGCTTCGTGCTG------------------------------------------  32
            ||||||||||||||||||||||||||||||||                                          
Sbjct    1  ATGGCCACCAGTTTCCGGACAGCTTCGTGCTGGGTAGTGCTGCTGAGGAGGAGCCTGCTAATGAGCTCAAGTGT  74

Query   33  ---------------------------------------------------------GGGATTATTGTCATTCA  49
                                                                     |||||||||||||||||
Sbjct   75  CAAGTTCGGGAATCTTCTGGGTGTTCCTTGGGCCCAGGGAAACAGTGCCCTGCCTGAGGGATTATTGTCATTCA  148

Query   50  AGGATATATCTATGGAGTTCACCTGGGATGAATGGCAGCTACTGGATTCTACACAGAAGTACCTGTACAGAGAT  123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGATATATCTATGGAGTTCACCTGGGATGAATGGCAGCTACTGGATTCTACACAGAAGTACCTGTACAGAGAT  222

Query  124  GTGATATTGGAAAACTATCATAACCTGATATCAGTGGGGTATCATGGTACCAAGCCTGACTTAATCTTCAAGTT  197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTGATATTGGAAAACTATCATAACCTGATATCAGTGGGGTATCATGGTACCAAGCCTGACTTAATCTTCAAGTT  296

Query  198  GGAACAAGGAGAAGATCCATGGATAATAAATGCCAAAATTTCCAGGCAGAGCTGTCCAGATGGCTGGGAAGAAT  271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAACAAGGAGAAGATCCATGGATAATAAATGCCAAAATTTCCAGGCAGAGCTGTCCAGATGGCTGGGAAGAAT  370

Query  272  GGTACCAGAACAATCAAGATGAGCTTGAGAGTATTGAAAGAAGCTATGCTTGTAGTGTGTTGGGAAGACTTAAT  345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGTACCAGAACAATCAAGATGAGCTTGAGAGTATTGAAAGAAGCTATGCTTGTAGTGTGTTGGGAAGACTTAAT  444

Query  346  CTGAGCAAAACCCATGATTCTTCAAGACAGAGACTCTATAACACACGTGGAAAAAGTTTGACACAAAACTCAGC  419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGAGCAAAACCCATGATTCTTCAAGACAGAGACTCTATAACACACGTGGAAAAAGTTTGACACAAAACTCAGC  518

Query  420  TCCAAGCAGAAGTTATTTAAGAAAGAATCCTGATAAGTTTCATGGTTATGAAGAACCATATTTTCTTAAGCATC  493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCCAAGCAGAAGTTATTTAAGAAAGAATCCTGATAAGTTTCATGGTTATGAAGAACCATATTTTCTTAAGCATC  592

Query  494  AAAGAGCTCATAGCATAGAAAAAAACTGTGTGTGTAGTGAATGTGGGAAAGCTTTTCGTTGTAAGTCACAGCTC  567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAAGAGCTCATAGCATAGAAAAAAACTGTGTGTGTAGTGAATGTGGGAAAGCTTTTCGTTGTAAGTCACAGCTC  666

Query  568  ATTGTACATCTCAGAATTCATACAGGAGAGAGACCTTATGAATGCAGTAAATGTGAAAGAGCCTTCAGTGCCAA  641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATTGTACATCTCAGAATTCATACAGGAGAGAGACCTTATGAATGCAGTAAATGTGAAAGAGCCTTCAGTGCCAA  740

Query  642  GTCAAACCTTAATGCTCATCAGAGAGTTCATACAGGAGAAAAACCCTACTCATGTAGTGAGTGCGAGAAGGTCT  715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTCAAACCTTAATGCTCATCAGAGAGTTCATACAGGAGAAAAACCCTACTCATGTAGTGAGTGCGAGAAGGTCT  814

Query  716  TCTCTTTCAGGTCACAGCTCATTGTCCATCAGGAAATTCACACAGGAGGGAAACCCTATGGCTGCAGTGAATGT  789
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCTCTTTCAGGTCACAGCTCATTGTCCATCAGGAAATTCACACAGGAGGGAAACCCTATGGCTGCAGTGAATGT  888

Query  790  GGGAAAGCCTACAGTTGGAAATCACAGCTTCTTTTACACCAGAGAAGTCACACAGGAGTGAAACCGTATGAATG  863
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGGAAAGCCTACAGTTGGAAATCACAGCTTCTTTTACACCAGAGAAGTCACACAGGAGTGAAACCGTATGAATG  962

Query  864  CAGCGAATGTGGGAAAGCCTTTAGTTTGAAGTCTCCATTCGTTGTACACCAGAGAACTCATACAGGAGTGAAAC  937
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAGCGAATGTGGGAAAGCCTTTAGTTTGAAGTCTCCATTCGTTGTACACCAGAGAACTCATACAGGAGTGAAAC  1036

Query  938  CCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTCCTATCTCCTTGTTCACATCCGAATGCATACA  1011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTCCTATCTCCTTGTTCACATCCGAATGCATACA  1110

Query 1012  GGAGAAAAACCCTATCAATGCAGTGATTGTGGGAAAGCCTTCAATATGAAGACACAACTCATTGTACATCAGGG  1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGAGAAAAACCCTATCAATGCAGTGATTGTGGGAAAGCCTTCAATATGAAGACACAACTCATTGTACATCAGGG  1184

Query 1086  AGTTCACACAGGAAATAATCCTTATCAATGCGGCGAATGTGGGAAAGCCTTTGGTAGGAAGGAACAGCTCACTG  1159
            |||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGTTCACACAGGAAATAATCCTTATCAATGCGGTGAATGTGGGAAAGCCTTTGGTAGGAAGGAACAGCTCACTG  1258

Query 1160  CACATCTGAGAGCTCATGCAGGAGAGAAGCCCTATGGATGCAGTGAATGTGGGAAGGCTTTCAGCAGCAAGTCA  1233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CACATCTGAGAGCTCATGCAGGAGAGAAGCCCTATGGATGCAGTGAATGTGGGAAGGCTTTCAGCAGCAAGTCA  1332

Query 1234  TACCTTGTTATACATAGGAGAACACACACCGGAGAGAGACCCTATGAATGTAGTTTGTGTGAGAGAGCCTTTTG  1307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TACCTTGTTATACATAGGAGAACACACACCGGAGAGAGACCCTATGAATGTAGTTTGTGTGAGAGAGCCTTTTG  1406

Query 1308  TGGAAAATCACAGCTGATTATACATCAGAGAACTCATTCAACTGAGAAGCCCTATGAATGCAATGAATGTGAAA  1381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGGAAAATCACAGCTGATTATACATCAGAGAACTCATTCAACTGAGAAGCCCTATGAATGCAATGAATGTGAAA  1480

Query 1382  AAGCCTACCCTAGGAAGGCATCACTTCAGATACACCAGAAAACTCATTCGGGAGAGAAACCTTTTAAATGCAGT  1455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AAGCCTACCCTAGGAAGGCATCACTTCAGATACACCAGAAAACTCATTCGGGAGAGAAACCTTTTAAATGCAGT  1554

Query 1456  GAATGTGGAAAAGCCTTCACTCAGAAGTCATCTCTCAGTGAACATCAGAGAGTTCACACTGGAGAGAAACCATG  1529
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1555  GAATGTGGAAAAGCCTTCACTCAGAAGTCATCTCTCAGTGAACATCAGAGAGTTCACACCGGAGAGAAACCATG  1628

Query 1530  GAAATGCTCTGAATGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGGAAGACTCATAAA  1599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GAAATGCTCTGAATGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGGAAGACTCATAAA  1698

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