Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07166
• Subject: XM_011526897.2
• Aligned Length: 1246
• Identities: 746
• Gaps: 380

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATAGGCATGTTGGAAAGTCTTCAGCATGAATCAGATCTCCTTCAGCATGATCAAATTCATACTGGAGAGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCTTATGAATGTAATGAATGTAGAAAAACTTTTAGCCTGAAGCAAAACCTTGTAGAGCATAAGAAAATGCATA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGGAGAGAAATCTCATGAATGCACTGAATGTGGTAAAGTGTGCTCTCGAGTCTCATCTCTTACTCTACACCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAAGTCACACAGGAAAGAAGGCATATAAATGTAATAAATGTGGAAAAGCCTTCAGCCAGAAGGAAAACTTCCT  296

Query    1  -------------------------------------------------------------ATGTCACACC---  10
                                                                         |||.|| |||   
Sbjct  297  TTCTCATCAGAAACATCACACTGGAGAGAAACCTTATGAATGTGAAAAAGTTTCTATTCAGATGCCA-ACCATC  369

Query   11  -TCAGCCAGCAGAAAATT--TACAGTGGGGAA--AACCCCTTTGCCTGTAAGGTATGTGGAAAAGTCTTCAGCC  79
             ||||.||.|||||||.|  ||||    ||||  ||.||||.|||.|||||||.||||||.||||.|||.|.|.
Sbjct  370  ATCAGACACCAGAAAAATCATACA----GGAACCAAACCCTATGCATGTAAGGAATGTGGCAAAGCCTTTAACG  439

Query   80  ACAAATCAAACCTCACTGAGCATGAGCATTTTCACACGAGAGAGAAACCTTTTGAATGTAACGAGTGTGGAAAA  153
            .||||.||.|.|||||||||||||||.|..||||.||..||||.|||||.|||||||||||..|||||||||.|
Sbjct  440  GCAAAGCATATCTCACTGAGCATGAGAAAATTCATACTGGAGAAAAACCATTTGAATGTAATCAGTGTGGAAGA  513

Query  154  GCCTTTAGCCAAAAGCAGTATGTCATTAAACATCAGAACACCCATACTGGCGAGAAGCTTTTCGAATGTAATGA  227
            |||||.|||||.|||||.||..||||||||||||||||||.|||||||||..||||||..||..||||||.|||
Sbjct  514  GCCTTCAGCCAGAAGCAATACCTCATTAAACATCAGAACATCCATACTGGAAAGAAGCCCTTTAAATGTAGTGA  587

Query  228  ATGTGGAAAATCATTTAGCCAGAAGGAAAACCTCCTTACGCACCAGAAAATTCACACTGGAGAAAAACCTTTTG  301
            .|||||||||.|.|||||||||||||||||||||.|||..||.||||.|||.||.||||||||.|||||||.||
Sbjct  588  GTGTGGAAAAGCTTTTAGCCAGAAGGAAAACCTCATTATACATCAGAGAATCCATACTGGAGAGAAACCTTATG  661

Query  302  AGTGTAAAGATTGCGGGAAAGCTTTCATTCAGAAGTCAAACCTCATCAGACACCAGAGAACTCACACAGGAGAG  375
            |.|||||||..||.|||||||||||||||||||||||||.||||||.|||||||||||||.|||||||||||||
Sbjct  662  AATGTAAAGGGTGTGGGAAAGCTTTCATTCAGAAGTCAAGCCTCATTAGACACCAGAGAAGTCACACAGGAGAG  735

Query  376  AAGCCCTTTGTA--TGTAAGGAGTGTGGAAAAACCTTCAGTGGCAAATCCAACCTTACTGAGCATGAGAAAATC  447
            ||.||  ||.||  ||||||||.|||||.|||.|||||||||||||.||.||.||.||.||||||||||||||.
Sbjct  736  AAACC--TTATACGTGTAAGGAATGTGGGAAAGCCTTCAGTGGCAAGTCAAATCTCACAGAGCATGAGAAAATT  807

Query  448  CATATTGGAGAGAAGCCTTTTAAATGTAGTGAATGTGGAACAGCCTTTGGCCAGAAGAAGTACCTCATAAAACA  521
            ||||||||||||||.||.|..|||||||.|||||||||||||..|||..|.||||||.|.||||||||.|||||
Sbjct  808  CATATTGGAGAGAAACCCTACAAATGTAATGAATGTGGAACAATCTTCAGGCAGAAGCAATACCTCATTAAACA  881

Query  522  TCAGAACATTCACACTGGAGAGAAACCCTATGAATGTAACGAATGTGGAAAAGCCTTCTCTCAGCGA---ACAT  592
            |||.||.|||||.||.|||||||||||||||||||||||..||||||||||||||||||||   |||   ||||
Sbjct  882  TCACAATATTCATACAGGAGAGAAACCCTATGAATGTAATAAATGTGGAAAAGCCTTCTCT---CGAATCACAT  952

Query  593  CACTTATTGTACATGTGAGGATTCATTCAGGTGATAAACCTTACGAATGCAATGTTTGTGGAAAAGCCTTCTCT  666
            |||||||||||||||||||.||||||.||||||||||.|||||.||.||.||.||.|||||.||||||||||.|
Sbjct  953  CACTTATTGTACATGTGAGAATTCATACAGGTGATAAGCCTTATGAGTGTAAGGTCTGTGGGAAAGCCTTCTGT  1026

Query  667  CAGAGCTCATCTCTCACTGTGCATGTGAGAAGCCATACAGGGGAGAAGCCCTATGGTTGTAATGAATGTGGGAA  740
            ||.|||||||||||.|||||||||.||||||||||||||||.|||||.||||||||||||||||||||||||||
Sbjct 1027  CAAAGCTCATCTCTTACTGTGCATATGAGAAGCCATACAGGTGAGAAACCCTATGGTTGTAATGAATGTGGGAA  1100

Query  741  AGCTTTCTCTCAGTTCTCAACCCTTGCTCTGCATTTGAGAATACACACAGGTAAGAAGCCTTATCAGTGCAGTG  814
            |||.||.||||||||||||||||||||||||||..|||||||.||.||.|||.|.||.|||||||||||.||||
Sbjct 1101  AGCCTTTTCTCAGTTCTCAACCCTTGCTCTGCACATGAGAATCCATACTGGTGAAAAACCTTATCAGTGTAGTG  1174

Query  815  AATGTGGGAAAGCTTTCAGCCAGAAGTCACACCACATTAGACACCAGAAAATTCATACTCAC  876
            ||||||||||||||||||||||.||||||||.||||||||||||||||.||||||||||||.
Sbjct 1175  AATGTGGGAAAGCTTTCAGCCAAAAGTCACATCACATTAGACACCAGAGAATTCATACTCAT  1236