Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07176
Subject:
NM_001260487.1
Aligned Length:
1614
Identities:
1270
Gaps:
168

Alignment

Query    1  ATGACCATGTCCAAGGAGGCAGTGACCTTCAAGGATGTGGCAGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT  74
            |||||||..|.||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT  74

Query   75  GGACCTTGCCCAGAGGAAGCTGTATCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTGTCAGTGGGGCATC  148
            |||||.||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct   75  GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC  148

Query  149  AACCATTCCACCGAGATACTTTCCACTTTCTAAGGGAGGAAAAGTTTTGGATGATGGATATAGCAACCCAAAGA  222
            ||||.|||||||.||||||||.||||||.||||||||.|||||||||||||||||||..|.|||||||||||||
Sbjct  149  AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA  222

Query  223  GAAGGGAATTCAGGAGGCAAGATCCAACCTGAGATGAAGACTTTTCCAGAAGCAGGACCACATGAAGGGTGGTC  296
            |||||||||||||||||||||||||||.|||||.||.||.||.||||||||||||||.|||||||||.||||||
Sbjct  223  GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC  296

Query  297  CTGCCAGCAGATCTGGGAAGAAATTGCAAGTGATTTAACCAGGCCTCAAGACTCTACCATAAAGAGCTCTCAGT  370
            |||||||||.|||||||||.|||||||||..||.|||||||||.||||.|||||||.||||||.|.||||||||
Sbjct  297  CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT  370

Query  371  TCTTTGAACAGGGTGATGCCCACTCCCAGGTTGAGGAAGGAATATCTATAATGCACACAGGACAGAAACCTTCC  444
            ||||||||.|.|||||||.||.||||||||||||.|.||||.||.|.|.|||.||.||||||||||||||||||
Sbjct  371  TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC  444

Query  445  AATTGTGGGAAGTGTAAACAATCCTTCAGTGATATGTCCATCTTTGATCTTCCTCAGCAAATACGCTCAGCAGA  518
            .|..||||||||||||||||.||||||||||||.|..||||||||||||||||||||||..||..|||||.|||
Sbjct  445  CAGGGTGGGAAGTGTAAACAGTCCTTCAGTGATGTTCCCATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGA  518

Query  519  GAAGTCTCATTCCTGTGATGAGTGTGGAAAAAGCTTCTGTTACATCTCAGCACTTCATATTCATCAGAGAGTCC  592
            |||||||.||.|.|||||||||||||||||||||.||||||||||||||||.||||||.|||||||||||||||
Sbjct  519  GAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCC  592

Query  593  ACCTGGGAGAGAAACTCTTTAAGTGTGACGTGTGTGGTAAGGAATTCAGTCAGAGTTTACATCTGCAAACTCAT  666
            ||.||||||||||||||||||.||||||.||||||||.||||||||.|||||.||.|.||||||||||||||||
Sbjct  593  ACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAACTCAT  666

Query  667  CAGAGAGTCCATACTGGAGAGAAACCTTTCAAATGTGAACAATGTGGGAGAGGCTTCAGATGTAGATCAGCACT  740
            |||||||||||.||||||||||||||.|||||||||||.||||||||||.|||.|||||..|||||||||||||
Sbjct  667  CAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACT  740

Query  741  TACAGTTCATTGCAAATTACACATGGGAGAGAAACATTATAATTGTGAGGCATGTGGGAGGGCCTTCATTCATG  814
            ||..||||||.|.||||||||||..||||||||||.|||.|.|||||||||||||||||.||||||||||||||
Sbjct  741  TAATGTTCATCGTAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATG  814

Query  815  ATTTCCAGCTTCAGAAACATCAGAGAATTCACACAGGGGAGAAGCCATTCAAATGTGAGATATGTAGTGTGAGC  888
            |||.|||||||.||.|||||.|||||||.||.||.||||||||.||||||||||||||.||||||.||..||.|
Sbjct  815  ATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAAGACC  888

Query  889  TTCCGTCTTAGGTCAAG---------------------------------------------------------  905
            |||..|.||||||||||                                                         
Sbjct  889  TTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATACATG  962

Query  906  ---------------------------TCTTAATAGGCATTGTGTGGTCCACACAGGAAAGAAACCAAACAGCA  952
                                       .||||||||||||||..||||||||||||||.|||||||..||||..
Sbjct  963  TGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTACAGAT  1036

Query  953  CTGGGGAATATGGAAAAGGCTTCATTCGTAGGCTGGATTTGTGTAAGCATCAGACGATCCACACAGGAGAGAAA  1026
            .||.|.|.|.||||||||||||.|||.|||||||.|||||.|.||||||||||..|.|||||||||||||||||
Sbjct 1037  GTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGAGAAA  1110

Query 1027  CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGACGGTCCTCCTATCTTTTGATCCATCAGCGAGTCCACAC  1100
            ||||||||||||||||||||||||||||||||||||.|||||||.|..|||||||.|||||||||||||||||.
Sbjct 1111  CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAG  1184

Query 1101  TGGA----------------------------------------------------------------------  1104
            ||||                                                                      
Sbjct 1185  TGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAGGGATTTTATACAAATTCACAACTGTCTTCCCATCAGA  1258

Query 1105  --------------GAAAAGCCATACAAATGTGACAAGTGTGGGAAGAGCTACATTACTAAGTCAGGTCTTGAC  1164
                          |||||||||||.||||||||..|||||||||||.||||..|||||||||....|||||||
Sbjct 1259  GATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAAGTTTAATCTTGAC  1332

Query 1165  TTGCACCACAGAGCCCACACAGGAGAGAGACCTTATAACTGTGATGACTGTGGGAAGAGCTTTAGACAGGCCTC  1238
            ||||||||.||.|.||||||.|||||||||||||||||.|||.|.||.||||||||||.||||||.|.||||||
Sbjct 1333  TTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTC  1406

Query 1239  AAGTATTTTGAATCATAAGAGACTCCATTGCCGAAAAAAACCATTCAAATGTGAGGATTGTGGAAAGAAGCTTG  1312
            |||||||||||||||||||||||||||.||||..|||||||||||||||||||||||.||||||||||.|||||
Sbjct 1407  AAGTATTTTGAATCATAAGAGACTCCACTGCCAGAAAAAACCATTCAAATGTGAGGACTGTGGAAAGAGGCTTG  1480

Query 1313  TATACCGGTCATACCGTAAAGACCAACAAAAAAACCACAGTGGAGAAAATCCATCCAAATGTGAAGACTGTGGG  1386
            ||.||.||.||||||||||||||||.|..|.|.||.|.|||||.|||||.||||||||||||||.||.||||||
Sbjct 1481  TACACAGGACATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGG  1554

Query 1387  AAGCGCTACAAGAGGCGCTTGAATCTTGATATAATTTTATCATTATTTTTAAATGACACG  1446
            |..|||||||||||||||||||||||.||||||.||||||||||||||.||||||||||.
Sbjct 1555  AGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACACA  1614

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