Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07185
Subject:
NM_001289450.1
Aligned Length:
1203
Identities:
803
Gaps:
318

Alignment

Query    1  ATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAGCTCCACCGCCCCCAATGTGGTAAACGCAGCCCGGGCCAAATTCCGCACGGTCGCTATCATCGCGCGCAGCC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGGGGACGTTCACGCCTCAGCATCACATTTCTCTCAAAGAGTCCACCGCAAAGCAGACTGGCATGAAATATAGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATTTGGAGGTCAAATTTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGATGAGGTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGATACTGCCGAAGTCT  370
                                  |||||.||.|||||.||||||||.|||||.|||||.||.||.||.||.||||
Sbjct    1  ----------------------ATGACAATTGCCTACGAAAGTGGAGTTAATCTCTTCGACACAGCTGAGGTCT  52

Query  371  ATGCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGTCTGGTC  444
            ||||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||..|||||
Sbjct   53  ATGCTGCTGGGAAGGCTGAGGTGATTCTGGGAAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGCTTGGTC  126

Query  445  ATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATTGAAGG  518
            ||.||||||||||||||||||||||||||||||||.||||||||.||.||||||||||||||.||.||||||||
Sbjct  127  ATCACAACCAAACTCTACTGGGGTGGAAAAGCTGAGACAGAAAGGGGACTGTCAAGAAAGCACATCATTGAAGG  200

Query  519  ATTGAAGGGCTCCCTCCAGAGGCTGCAGCTCGAGTATGTGGATGTGGTCTTTGCAAATCGACCGGACAGTAACA  592
            |.||||.||||||||||||||||||||.||.||.||.|||||||||||||||||||||||.||.|||||.||||
Sbjct  201  ACTGAAAGGCTCCCTCCAGAGGCTGCAACTGGAATACGTGGATGTGGTCTTTGCAAATCGCCCAGACAGCAACA  274

Query  593  CTCCCATGGAAGAAATTGTCCGAGCCATGACACATGTGATAAACCAAGGCATGGCGATGTACTGGGGCACCTCG  666
            ||||||||||||||||.||.|||||||||||.||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  275  CTCCCATGGAAGAAATCGTTCGAGCCATGACGCACGTGATCAACCAAGGCATGGCCATGTACTGGGGCACCTCG  348

Query  667  AGATGGAGTGCTATGGAGATCATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATGATCCCACCGGTCTGTGA  740
            ||.|||||.||.||||||||||||||||||||.|||||.|||.|.||||||||.||||||||.||.||||||||
Sbjct  349  AGGTGGAGCGCGATGGAGATCATGGAAGCCTACTCTGTCGCACGGCAGTTCAACATGATCCCGCCTGTCTGTGA  422

Query  741  ACAAGCTGAGTACCATCTTTTCCAGAGAGAGAAAGTGGAGGTCCAGCTGCCAGAGCTCTACCACAAAATAGGTG  814
            .||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||.||||||||.|
Sbjct  423  GCAAGCTGAGTACCATCTTTTCCAGAGAGAGAAGGTGGAGGTCCAGCTGCCGGAGCTCTACCATAAAATAGGAG  496

Query  815  TTGGCGCAATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAACGGGGTGCCTGAAAGT  888
            ||||.|||||||||||||||||||||||.||||||||.||.|||||||||||.|||||.||||||||.||||||
Sbjct  497  TTGGTGCAATGACATGGTCTCCACTTGCTTGTGGAATTATTTCAGGAAAATATGGAAATGGGGTGCCAGAAAGT  570

Query  889  TCCAGGGCTTCACTGAAGTGCTACCAGTGGTTGAAAGAAAGAATTGTAAGTGAAGAAGGGAGAAAACAGCAAAA  962
            ||.||.|||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||
Sbjct  571  TCTAGAGCTTCACTGAAGTGCTACCAGTGGTTGAAGGAAAGAATCGTAAGTGAAGAAGGGAGAAAACAGCAAAA  644

Query  963  CAAGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTGGTGCC  1036
            ||||||.||||||||.||.|||||.||.|||||.|||||.|||||.|||||||||||.|||||.||||||||||
Sbjct  645  CAAGCTGAAAGACCTCTCTCCAATCGCTGAGCGCCTGGGGTGCACGCTACCTCAGCTGGCTGTGGCGTGGTGCC  718

Query 1037  TGAGAAACGAAGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAACTCATTGAAAACCTTGGTGCC  1110
            |||||||.||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  719  TGAGAAATGAGGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCGGAACAACTCATTGAAAACCTTGGTGCC  792

Query 1111  ATTCAGGTTCTCCCAAAGATGACATCACATGTGGTAAATGAGATTGATAACATACTGCGCAACAAGCCCTACAG  1184
            ||||||||.|||||.|||||||||||.||.|||||.||.|||||||||||||||||||||||||||||||||||
Sbjct  793  ATTCAGGTCCTCCCTAAGATGACATCTCACGTGGTGAACGAGATTGATAACATACTGCGCAACAAGCCCTACAG  866

Query 1185  CAAGAAGGACTATAGATCA  1203
            |||.|||||||||||||||
Sbjct  867  CAAAAAGGACTATAGATCA  885