Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07185
Subject:
XM_017007174.2
Aligned Length:
1282
Identities:
559
Gaps:
662

Alignment

Query    1  ATGCAAGTCTCCATAGCCTGCACAG----AGCACAATTTGAAGAGTCGGA-----------------ATGGTGA  53
            ||||..|      .||||.|.||||    |||       |..|||||.||                 |.|.|.|
Sbjct    1  ATGCTGG------CAGCCCGGACAGGGGCAGC-------GGGGAGTCAGATCTCAGAGGAGAACACCAAGTTAA  61

Query   54  GGACCGAC----------TTCTG-AGCAAG------CAGAGCTCC----ACCGCC-CCCAATGTGGTAAA---C  102
            |||  |||          ||||| ||||.|      ||.|.||||    |..||| |..||...|.||||   .
Sbjct   62  GGA--GACAGTCTGGGTTTTCTGTAGCAGGGAAAGACAAATCTCCCAAGAAAGCCTCAGAAAACGCTAAAGACA  133

Query  103  GCAGCC---------CGGGCCAAATTCCGCAC-GGTCGCTATCATC----------GCGCGCAGCCTGGGGACG  156
            ||||||         |.||..|||..|.||.| ||.||| .|||.|          |||||.||  |||.||.|
Sbjct  134  GCAGCCTTAGTCCCTCAGGGGAAAGCCAGCTCAGGGCGC-GTCAACTGGCTCTGCTGCGCGAAG--TGGAGATG  204

Query  157  TTCACG--CCT-CAGCATC----ACATTTCTCTCAAAGAG---TCCACCG-CAAAGCA-GACTGGCATGAAATA  218
            ..|..|  ||| .||| ||    ||.|.||   ||..|||   .|||||| |  .||| .||.||||||....|
Sbjct  205  AACTGGTACCTAAAGC-TCTGCGACCTGTC---CAGCGAGCACACCACCGTC--TGCACCACAGGCATGCCGCA  272

Query  219  TAGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATTTGGAGGTCAAA  292
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  273  CAGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATTTGGAGGTCAAA  346

Query  293  TTTCAGATGAGGTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGATACTGCCGAA  366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  347  TTTCAGATGAGGTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGATACTGCCGAA  420

Query  367  GTCTATGCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGTCT  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  GTCTATGCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGTCT  494

Query  441  GGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATTG  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  495  GGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATTG  568

Query  515  AAGGATTGAAGGGCTCCCTCCAGAGGCTGCAGCTCGAGTATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  569  AAGGATTGAAGGGCTCCCTCCAGAGGCTGCAGCTCGAGTATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT  642

Query  589  AACACTCCCATGGAAGAAATTGTCCGAGCCATGACACATGTGATAAACCAAGGCATGGCGATGTACTGGGGCAC  662
            ||||||||||||||||||.|||  |.||                               ||||| .||.|.|| 
Sbjct  643  AACACTCCCATGGAAGAACTTG--CTAG-------------------------------GATGT-TTGAGACA-  681

Query  663  CTCG-AGATGGAGTGCTATGGAGATCATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATGATCCCACCGGTC  735
               | ||||  |||    |.||||    ||.                                           
Sbjct  682  ---GAAGAT--AGT----TTGAGA----GGC-------------------------------------------  699

Query  736  TGTGAACAAGCTGAGTACCATCTTTTCCAGAGAGAGAAAGTGGAGGTCCAGCTGCCAGAGCTCTACCACAAAAT  809
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  810  AGGTGTTGGCGCAATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAACGGGGTGCCTG  883
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  884  AAAGTTCCAGGGCTTCACTGAAGTGCTACCAGTGGTTGAAAGAAAGAATTGTAAGTGAAGAAGGGAGAAAACAG  957
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  958  CAAAACAAGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTG  1031
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1032  GTGCCTGAGAAACGAAGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAACTCATTGAAAACCTTG  1105
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1106  GTGCCATTCAGGTTCTCCCAAAGATGACATCACATGTGGTAAATGAGATTGATAACATACTGCGCAACAAGCCC  1179
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1180  TACAGCAAGAAGGACTATAGATCA  1203
                                    
Sbjct  700  ------------------------  699

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