Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07185
- Subject:
- XM_017007174.2
- Aligned Length:
- 1282
- Identities:
- 559
- Gaps:
- 662
Alignment
Query 1 ATGCAAGTCTCCATAGCCTGCACAG----AGCACAATTTGAAGAGTCGGA-----------------ATGGTGA 53
||||..| .||||.|.|||| ||| |..|||||.|| |.|.|.|
Sbjct 1 ATGCTGG------CAGCCCGGACAGGGGCAGC-------GGGGAGTCAGATCTCAGAGGAGAACACCAAGTTAA 61
Query 54 GGACCGAC----------TTCTG-AGCAAG------CAGAGCTCC----ACCGCC-CCCAATGTGGTAAA---C 102
||| ||| ||||| ||||.| ||.|.|||| |..||| |..||...|.|||| .
Sbjct 62 GGA--GACAGTCTGGGTTTTCTGTAGCAGGGAAAGACAAATCTCCCAAGAAAGCCTCAGAAAACGCTAAAGACA 133
Query 103 GCAGCC---------CGGGCCAAATTCCGCAC-GGTCGCTATCATC----------GCGCGCAGCCTGGGGACG 156
|||||| |.||..|||..|.||.| ||.||| .|||.| |||||.|| |||.||.|
Sbjct 134 GCAGCCTTAGTCCCTCAGGGGAAAGCCAGCTCAGGGCGC-GTCAACTGGCTCTGCTGCGCGAAG--TGGAGATG 204
Query 157 TTCACG--CCT-CAGCATC----ACATTTCTCTCAAAGAG---TCCACCG-CAAAGCA-GACTGGCATGAAATA 218
..|..| ||| .||| || ||.|.|| ||..||| .|||||| | .||| .||.||||||....|
Sbjct 205 AACTGGTACCTAAAGC-TCTGCGACCTGTC---CAGCGAGCACACCACCGTC--TGCACCACAGGCATGCCGCA 272
Query 219 TAGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATTTGGAGGTCAAA 292
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 273 CAGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATTTGGAGGTCAAA 346
Query 293 TTTCAGATGAGGTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGATACTGCCGAA 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 347 TTTCAGATGAGGTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGATACTGCCGAA 420
Query 367 GTCTATGCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGTCT 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GTCTATGCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGTCT 494
Query 441 GGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATTG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 495 GGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATTG 568
Query 515 AAGGATTGAAGGGCTCCCTCCAGAGGCTGCAGCTCGAGTATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 569 AAGGATTGAAGGGCTCCCTCCAGAGGCTGCAGCTCGAGTATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT 642
Query 589 AACACTCCCATGGAAGAAATTGTCCGAGCCATGACACATGTGATAAACCAAGGCATGGCGATGTACTGGGGCAC 662
||||||||||||||||||.||| |.|| ||||| .||.|.||
Sbjct 643 AACACTCCCATGGAAGAACTTG--CTAG-------------------------------GATGT-TTGAGACA- 681
Query 663 CTCG-AGATGGAGTGCTATGGAGATCATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATGATCCCACCGGTC 735
| |||| ||| |.|||| ||.
Sbjct 682 ---GAAGAT--AGT----TTGAGA----GGC------------------------------------------- 699
Query 736 TGTGAACAAGCTGAGTACCATCTTTTCCAGAGAGAGAAAGTGGAGGTCCAGCTGCCAGAGCTCTACCACAAAAT 809
Sbjct 700 -------------------------------------------------------------------------- 699
Query 810 AGGTGTTGGCGCAATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAACGGGGTGCCTG 883
Sbjct 700 -------------------------------------------------------------------------- 699
Query 884 AAAGTTCCAGGGCTTCACTGAAGTGCTACCAGTGGTTGAAAGAAAGAATTGTAAGTGAAGAAGGGAGAAAACAG 957
Sbjct 700 -------------------------------------------------------------------------- 699
Query 958 CAAAACAAGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTG 1031
Sbjct 700 -------------------------------------------------------------------------- 699
Query 1032 GTGCCTGAGAAACGAAGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAACTCATTGAAAACCTTG 1105
Sbjct 700 -------------------------------------------------------------------------- 699
Query 1106 GTGCCATTCAGGTTCTCCCAAAGATGACATCACATGTGGTAAATGAGATTGATAACATACTGCGCAACAAGCCC 1179
Sbjct 700 -------------------------------------------------------------------------- 699
Query 1180 TACAGCAAGAAGGACTATAGATCA 1203
Sbjct 700 ------------------------ 699
