Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07193
Subject:
NR_161422.1
Aligned Length:
2102
Identities:
1632
Gaps:
439

Alignment

Query    1  ----------------------------------------ATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGC  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct    1  AGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGC  74

Query   35  TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTAC  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTAC  148

Query  109  ATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACAGTGAGCATGTTTTTGAACACATTAACACCGAA  182
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct  149  ATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACA--------------------------------  190

Query  183  GTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTATTTTC  256
                                                               |||||||||||||||||||||||
Sbjct  191  ---------------------------------------------------GATATTTGAATGGTGGTATTTTC  213

Query  257  GCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  214  GCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC  287

Query  331  AACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGT  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  288  AACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGT  361

Query  405  ATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTC  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  362  ATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTC  435

Query  479  TTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGT  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  436  TTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGT  509

Query  553  CCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGC  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  510  CCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGC  583

Query  627  CTTGGAGATAAATGAAATTAGGTCCAGAGTTGAAGTTCCCCTAATTGCTTCCTCTACCATCTGGGAGATAAAAT  700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  584  CTTGGAGATAAATGAAATTAGGTCCAGAGTTGAAGTTCCCCTAATTGCTTCCTCTACCATCTGGGAGATAAAAT  657

Query  701  TGTTACCAAAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAGAAAAA  774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  658  TGTTACCAAAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAGAAAAA  731

Query  775  TTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCA  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  732  TTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCA  805

Query  849  GTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGCCAGAA  922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  806  GTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGCCAGAA  879

Query  923  GACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTATGTTC  996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  880  GACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTATGTTC  953

Query  997  AATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA  1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  954  AATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA  1027

Query 1071  GTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCT  1144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028  GTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCT  1101

Query 1145  CTGACAAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATT  1218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  CTGACAAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATT  1175

Query 1219  CATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGA  1292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176  CATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGA  1249

Query 1293  ACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGG  1366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  ACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGG  1323

Query 1367  AAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGG  1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324  AAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGG  1397

Query 1441  CACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTC  1514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398  CACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTC  1471

Query 1515  AGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGG  1588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472  AGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGG  1545

Query 1589  CCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTATGATT------GACATTTTCTGC  1656
            ||||||||||||||||||||||||||||||||||||||||||||||||||    ||      .||.||.|.|||
Sbjct 1546  CCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCT----TTCCTCAGCACTTTGTTTGC  1615

Query 1657  TCGGC---AGAGT---TCAGGGACTGGAATTGCAAGAGTAT--TTTCAT---GCGTGTTG--------AAGA-T  1710
            .|  |   |.|.|   |||.|||  |.||.|| .||||.||  |..|||   |..|||.|        ||.| .
Sbjct 1616  CC--CCTTAAACTTTGTCATGGA--GAAAGTG-GAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACG  1684

Query 1711  GAACTG-GA-AATCCCT------CCGGCACCTCA-------ATTTCAACATTTCC------AAAAC--------  1755
            ||.||| || ||.||||      |...|||||||       .|..||.|||.|||      ..|||        
Sbjct 1685  GATCTGAGAGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTG  1758

Query 1756  --------------------------------------------------------------------------  1755
                                                                                      
Sbjct 1759  GACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAAATGTTCATGGACTATTCCATAT  1832

Query 1756  --------------------------------------------------------------------------  1755
                                                                                      
Sbjct 1833  TAAAAGCTGTTTTTGTTGTACAAAATTCACTGATGTTCAGTTCTATTTTATTTTGCCTTCAGAAAAGAAGAAAG  1906

Query 1756  --------------------------------------------------------------------------  1755
                                                                                      
Sbjct 1907  TCAAAAATAAAACTTTTGTGTATTACAGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGAT  1980

Query 1756  ------------------------------  1755
                                          
Sbjct 1981  GTCCCAAATAAACCTTTGGATTTACCTTGA  2010

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