Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07193
- Subject:
- XR_868764.2
- Aligned Length:
- 2615
- Identities:
- 963
- Gaps:
- 1558
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGGAAAATGTTCATAATGTGGTTTTATTTTTATTCATTTTTCATTAGGTTCTGATGAAGTACGCCAAAGTTAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTAGGGAATTGCTTATATGTTAAAAACAAAAACAAAACGAGTAAAGACTTGTTTGAATGGCGATCACTTGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATAGGAAGAAAAAGAAATACGTATGTTGTCAGTTTCTCTGGAAAACCCTTCACCGTGCTGTTTGGGAAAAACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACAAATAGCAGAAGCTAGTACAAAGGGAACCAAAATTTCTCTTCAGGCCTAATGAGCAGGAGTGCATCTCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTAGCTCGTCTGGATTTCATTGATACCTTTAAGCCCCAGTCCTGGGAGACACAGCTTTAAGACTCCTGGAAACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGTTTACGTCCTGGAAATCTTGATTGCAACCGAATTCTGACTCCACTTTAAGGTAGACCTAGGAACGCTTTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCAGTTTCCCTCCGTCTATCACCCCAGGACCTGGCAACTGTTGCAGGCTCCCCCCCCAGACATTACAAAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGTGGAGCACGCCCGGCTCTCGGAAGCGCTCTACACCCGCGAGCTGTTACGTCAGTGGGTCCCTCGGCGGCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGGGCTGTCCTCCTAAAATACTAGTACAAGAAGTATAAATGGCCCGGGAGAGTGCAGGGACCGGGCCCACGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGCTCCACGAAGGCCACCGGCGGGGGCTCGGAGCGCAGGCCGCGCGCTTTCCCGCCGCATCCGGGCGCCGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGAGCTCCGGGGACGCCGGGCCCTGGCGGCGGCGGCGGCTCGAGCCGTGCCTCGGGCGGGTGAATCATCCCGGC 814
Query 1 ----------------------------------------ATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGC 34
|||||.||.||||.|.|||||||.||||||||||
Sbjct 815 CGACAGCGAGCGCCGCGGCGGCCCGTAGCAGCGCCGGAAGATGGCCGAGGCGGGCGCGGGCTTCCTGGAGCAGC 888
Query 35 TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTAC 108
|||||||||||||.||.|||||.|||||.||||||||||||||||||||||||.|||||||.||||||||||||
Sbjct 889 TCAAGTCCTGCATCGTGTGGTCGTGGACCTATCTGTGGACCGTGTGGTTCTTCCTCGTGCTCTTCCTGGTCTAC 962
Query 109 ATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACAGTGAGCATGTTTTTGAACACATTAACACCGAA 182
||||||.|||||||..|||..||||||||||||.||||||||||||||||||||||||||||.|||||.||.||
Sbjct 963 ATCCTGAGGGTGCCCCTGAGGATCAACGACAACCTGAGCACAGTGAGCATGTTTTTGAACACGTTAACCCCAAA 1036
Query 183 GTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTATTTTC 256
|||||||||||||||.||||||||||||||.||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 1037 GTTCTACGTGGCCCTGACAGGCACTTCCTCGCTAATATCGGGACTTATTTTGATATTTGAATGGTGGTATTTTC 1110
Query 257 GCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC 330
||||.||.|||||.||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCAAGTATGGAACATCTTTCATTGAACAAGTCTCCGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC 1184
Query 331 AACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGT 404
|||||||||||.|||||||||||||||||.||.||||||||||||||.||.|||||||||||||||||||||||
Sbjct 1185 AACTCTTCCAATAATTCTAATTCCAGTAATGGAGACTCAGATTCCAACAGACAAAGTGTCTCAGAATGCAAAGT 1258
Query 405 ATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTC 478
|||||||||||||||.|||.|.|||||||||||.|||||.||||||||.||||||||.||||||||||||||||
Sbjct 1259 ATGGCGAAATCCACTGAATCTGTTTAGGGGTGCGGAATATAATCGGTACACTTGGGTCACAGGACGAGAGCCTC 1332
Query 479 TTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGT 552
|.||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||.||.||.|||||.||.
Sbjct 1333 TGACCTACTATGACATGAACCTCTCTGCCCAGGACCACCAGACATTCTTTACTTGTGATTCAGATCATCTTCGC 1406
Query 553 CCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGC 626
||.|||||||||||||||||.|||||.||||||||.||.|||||.|||||.|||||||||||||||||||||||
Sbjct 1407 CCTGCAGATGCAATAATGCAAAAAGCTTGGAGAGAAAGGAACCCTCAAGCCAGGATTTCTGCAGCTCATGAAGC 1480
Query 627 CTTGGAGATAAATGAAATTAGGTCCAGAGTTGAAGTTCCCCTAATTGCTTCCTCTACCATCTGGGAGATAAAAT 700
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CTTGGAGATAAACGAAATTAGGTCCAGAGTTGAAGTTCCCCTAATTGCTTCCTCTACCATCTGGGAGATAAAAT 1554
Query 701 TGTTACCAAAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAGAAAAA 774
||||||||||||||||||||||.||.|||||||||||.|||||.|||||.|||||.||||||||||||||||||
Sbjct 1555 TGTTACCAAAGTGTGCAACTGCGTACATTCTCTTGGCGGAAGAAGAAGCGACAACTATTGCTGAAGCAGAAAAA 1628
Query 775 TTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCA 848
.|.|||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||||||||.|||||
Sbjct 1629 CTCTTTAAGCAGGCCCTGAAGGCTGGAGATGGTTGTTACCGGCGCTCTCAGCAGCTACAACATCATGGGTCCCA 1702
Query 849 GTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGCCAGAA 922
|||||||||.|||||.||||||||||||||||||||.||.||.||||||||||||||.||.|||||||||.|.|
Sbjct 1703 GTATGAAGCTCAACACAGACGAGACACCAATGTCTTAGTCTATATCAAAAGAAGGCTGGCGATGTGTGCCCGGA 1776
Query 923 GACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTATGTTC 996
||||.||.||||||||.|||||||||||.||||||||||||
Sbjct 1777 GACTTGGAAGGACCAGAGAAGCAGTGAAGATGATGAGAGAT--------------------------------- 1817
Query 997 AATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA 1070
Sbjct 1818 -------------------------------------------------------------------------- 1817
Query 1071 GTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCT 1144
|||||||||||||||||||.||.|||||||||||||||||.||..|||||||||||||||||||||
Sbjct 1818 --------ATATAAGCTTACCAAAGTCGGCGACAATATGCTACACAGCCGCCCTGCTCAAAGCAAGAGCTGTCT 1883
Query 1145 CTGACAAAT------TCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAG 1212
||||||||| |..||.|| ||..|||||..
Sbjct 1884 CTGACAAATCGCCAGTACCTACT---GCAACATCTTT------------------------------------- 1917
Query 1213 GCCATTCATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACC 1286
Sbjct 1918 -------------------------------------------------------------------------- 1917
Query 1287 CCCAGAACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGA 1360
Sbjct 1918 -------------------------------------------------------------------------- 1917
Query 1361 GAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAA 1434
Sbjct 1918 -------------------------------------------------------------------------- 1917
Query 1435 AAGGGGCACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGA 1508
Sbjct 1918 -------------------------------------------------------------------------- 1917
Query 1509 AGTCTCAGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCA 1582
Sbjct 1918 -------------------------------------------------------------------------- 1917
Query 1583 TGCTGGCCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTATGATTGACATTTTCTGC 1656
Sbjct 1918 -------------------------------------------------------------------------- 1917
Query 1657 TCGGCAGAGTTCAGGGACTGGAATTGCAAGAGTATTTTCATGCGTGTTGAAGATGAACTGGAAATCCCTCCGGC 1730
Sbjct 1918 -------------------------------------------------------------------------- 1917
Query 1731 ACCTCAATTTCAACATTTCCAAAAC 1755
Sbjct 1918 ------------------------- 1917
