Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07308
- Subject:
- NR_132310.1
- Aligned Length:
- 5328
- Identities:
- 686
- Gaps:
- 4552
Alignment
Query 1 --------------------------ATGGCCTCCTTGGAGGTCAGTCGTGGTCCTCGCAG-GTCTCGGCGGGA 47
|||||.|||..||.||..|||||..|| ||.||.| |||||.||||..
Sbjct 1 CTTCCGGCGCCTCTCGCAGAGCCGTCATGGCTTCCACGGGGGCGAGTCGCAGT-CTTGCTGCGTCTCCGCGGCC 73
Query 48 GCTGGAAGTGCGCAGTC--CACGACAGAACAAATATTCGGTGCTTTTACCTACCTACAACGAGCGCGAGAACCT 119
||.|.|.|..||| || |.||||||.||||.||.||||||||.||.||.|||||||||||.||.||||||||
Sbjct 74 GCCGCAGGGCCGC--TCCTCGCGACAGGACAAGTACTCGGTGCTGTTGCCCACCTACAACGAACGGGAGAACCT 145
Query 120 GCCGCTCATCGTGTGGCTGCTGGTGAAAAGCTTCTCCGAGAGTGGAATCAACTATGAAATTATAATCATAGATG 193
|||||||||||||||||||||||||||.||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 146 GCCGCTCATCGTGTGGCTGCTGGTGAAGAGCTTCTCCGAGAGTGCAATCAACTATGAAATTATAATCATAGATG 219
Query 194 ATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGG-AGAAGATCTATGGGTCAGACAGAATTCTTCT 266
|||||||||||||.||.|||||.||.|||||||||||..||| || |||||||||||.|.|||||||||||.||
Sbjct 220 ATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAACAACTGGCAG-AGATCTATGGGCCCGACAGAATTCTCCT 292
Query 267 AAGACCACGAGAGAAAAAGTTGGGACTAGGAACTGCATATATTCATGGAATGAAACATGCCACAGGAAACTACA 340
|||||||||||||||||||.||||.||.||||||||.||.|||||||||||.|||||.|||||.||.|||||..
Sbjct 293 AAGACCACGAGAGAAAAAGCTGGGTCTCGGAACTGCCTACATTCATGGAATCAAACACGCCACGGGGAACTATG 366
Query 341 TCATTATTATGGATGCTGATCTCTCACACCATCCAAAATTTATTCCTGAATTTATTAGGAAGCAAAAGGAGGGT 414
|.||.||.|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.||||||||||||
Sbjct 367 TGATCATCATGGATGCTGACCTCTCCCACCATCCCAAATTTATTCCTGAATTTATCAGGAAACAAAAGGAGGGT 440
Query 415 AATTTTGATATTGTCTCTGGAACTCGCTACAAAGGAAATGGAGGTGTATATGGCTGGGATTTGAAAAGAAAAAT 488
||||||||||||||||||||||||||.|||||.||.|||||.|||||.|||||.|||||||||||||||||.||
Sbjct 441 AATTTTGATATTGTCTCTGGAACTCGATACAAGGGGAATGGGGGTGTTTATGGATGGGATTTGAAAAGAAAGAT 514
Query 489 AATCAGCCGTGGGGCCAATTTTTTAACTCAGATCTTGCTGAGACCAGGAGCATCTGATTTAACAGGAAGTTTCA 562
||||||||||||||||||||||.|||||||.||..||||||||||.|||||.||.||.|||||||||||.||||
Sbjct 515 AATCAGCCGTGGGGCCAATTTTATAACTCAAATTCTGCTGAGACCTGGAGCGTCAGACTTAACAGGAAGCTTCA 588
Query 563 GATTATACCGAAAAGAAGTTCTAGAGAAATTAATAGAAAAATGTGTTTCTAAAGGCTACGTCTTCCAGATGGAG 636
|||||||||||||||||||||||.||||||||||||||||||||||.||.||||||||.|||||.||||||||.
Sbjct 589 GATTATACCGAAAAGAAGTTCTACAGAAATTAATAGAAAAATGTGTCTCCAAAGGCTATGTCTTTCAGATGGAA 662
Query 637 ATGATTGTTCGGGCAAGACAGATGAATTATACTATTGGCGAGGTTCCAATATCATTTGTGGATCGTGTTTATGG 710
|||||||||||.|||||||||||||||||.||||||||.|||||||||||.||||||||||||||.||||||||
Sbjct 663 ATGATTGTTCGAGCAAGACAGATGAATTACACTATTGGTGAGGTTCCAATTTCATTTGTGGATCGAGTTTATGG 736
Query 711 TGAATCCAAGTTGGGAGGAAATGAAATAGTATCTTTCTTGAAAGGATTATTGACTCTTTTTGCTACTACA---- 780
||||||||||||||||||||||||||||||.||.|||.|||||||.|||||||||||.||||||||.|||
Sbjct 737 TGAATCCAAGTTGGGAGGAAATGAAATAGTCTCGTTCCTGAAAGGGTTATTGACTCTCTTTGCTACCACATAAA 810
Query 781 -------------------------------------------------------------------------- 780
Sbjct 811 AGAAATGATTCACTTATGCTTCCCGTGTTCATTTCAATTAAAAGTAGAGAAGCCCGGGTCACTGATTTTTATCA 884
Query 781 -------------------------------------------------------------------------- 780
Sbjct 885 ATGTTGTCTTAACACATGAGCCAAAGAAACTATGTTCCAACTTCCTGTCAACAATCTTGGCAGTTTAAGAAAAG 958
Query 781 -------------------------------------------------------------------------- 780
Sbjct 959 CCCGGAAAACTGTGAAAAAAATACTTAGTGACATTGGGTTGGAATACTGTAAAGAACATATAGAAGATTTTAAA 1032
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1033 CAGTTTGAACCTAATGACTTTTATTTGAAAAACACTACATGGGAGGATGTAGGACTGTGGGACCCTTCTCTTAC 1106
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1107 GAAAAATCAGGACTATCGGACAAAACCTTTTTGCTGCAGTGCTTGTCCGTTTTCCTCAAAATTCTTCTCTGCCT 1180
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1181 ACAAAAGTCATTTCCGGAATGTCCATAGTGAAGACTTTGAAAATAGGATTCTCCTTAACTGCCCTTACTGTACC 1254
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1255 TTCAATGCAGATAAAAAGACTTTGGAAACACACATTAAAATATTTCATGCTCCAAACTCCAGCGCACCAAGTAG 1328
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1329 CAGCCTCAGCACTTTCAAAGATAAAAACAAAAACGATGGCCTTAAACCTAAGCAGGCTGACAATGTAGAGCAAG 1402
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1403 CCGTGTATTACTGCAAGAAGTGCACTTACCGAGACCCTCTCTACGAGATCGTCAGGAAGCACATCTACAGGGAA 1476
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1477 CATTTTCAACACGTGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCCTGGG 1550
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1551 CACAAATGCCCGAGAGGAGTGTAACATCCACTGCAAGCGATGCCTTTTCATGCCCAAGTCCTATGAAGCTTTGG 1624
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1625 TACAGCATGTCATTGAGGACCATGAACGGATAGGCTATCAGGTCACTGCCATGATCGGACACACAAATGTTGTA 1698
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1699 GTTCCCCGAGCCAAGCCCTTGATGCTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACG 1772
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1773 AATCAGCTCCCTTGCTTCTGGAAATGTCCGGTCGTTGCCATCACAGCAGATGGTAAACCGATTGTCAATACCAA 1846
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1847 AGCCCAACTTAAATTCAACGGGAGTCAACATGATGTCCAATGTTCACCTGCAGCAAAACAACTATGGAGTCAAA 1920
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1921 TCTGTGGGCCAGAGCTATGGTGTTGGCCAGTCAGTGAGGCTGGGACTAGGTGGCAATGCTCCAGTTTCCATCCC 1994
Query 781 -------------------------------------------------------------------------- 780
Sbjct 1995 TCAACAGTCTCAGTCCGTGAAACAGTTACTTCCAAGTGGGAATGGGAGGTCTTTTGGGCTAGGTGCTGAGCAGA 2068
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2069 GGCCCCCAGCAGCAGCCAGGTACTCCCTGCAGACTGCCAACACCTCTCTACCCCCAGGCCAAGTGAAGTCTCCC 2142
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2143 TCTGTGTCTCAGTCACAGGCATCTAGAGTATTAGGTCAGTCCAGTTCTAAACCTCCACCAGCCGCCACAGGCCC 2216
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2217 TCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTTTCCCTGAGAATG 2290
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2291 TCTATAGCGTTCACTTCGAAAAGGAGCATAAAGCTGAGAAAGTCCCAGCCGTAGCTAACTACATTATGAAAATA 2364
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2365 CACAATTTTACTAGCAAATGCCTCTACTGTAATCGCTATTTGCCTACAGATACCCTACTCAACCATATGTTAAT 2438
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2439 TCATGGTCTGTCTTGTCCGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGG 2512
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2513 TTCATATTGATGAAGAGATGGGGCCTAAAACGGATTCTACTTTGAGCTTTGATTTGACATTGCAACAGGGCAGT 2586
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2587 CACACCAACATTCATCTCCTGGTGACCACATACAACCTGAGGGATGCCCCGGCTGAATCAGTTGCTTACCATGC 2660
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2661 CCAAAATAATGCCCCAGTTCCTCCAAAGCCACAACCAAAAGTTCAGGAAAAAGCAGATGTCCCGGTTAAAAGTT 2734
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2735 CACCTCAAGCTGCAGTGCCCTATAAAAAAGATGTTGGGAAGACCCTTTGCCCTCTTTGCTTTTCAATACTAAAA 2808
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2809 GGACCCATATCTGATGCACTTGCACATCATTTACGAGAAAGACACCAAGTTATTCAGACAGTTCATCCGGTTGA 2882
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2883 GAAAAAGCTAACTTACAAATGTATCCATTGCCTTGGTGTGTATACTAGCAACATGACAGCCTCAACCATCACTC 2956
Query 781 -------------------------------------------------------------------------- 780
Sbjct 2957 TGCATCTAGTCCACTGCAGGGGTGTTGGAAAAACCCAGAATGGCCAGGACAAGACAAACGCACCTTCTCGGCTC 3030
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3031 AATCAGTCTCCAGGCCTGGCCCCTGTGAAGCGCACGTATGAGCAGATGGAGTTTCCACTGCTAAAAAAGCGGAA 3104
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3105 GCTGGAGGAGGATGCTGATTCCCCTAGCTGCTTTGAAGAGAAGCCAGAAGAGCCTGTTGTTTTAGCTTTAGACC 3178
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3179 CCAAGGGTCATGAAGATGATTCTTATGAGGCTAGGAAAAGCTTTCTCACAAAGTACTTCAACAAACAGCCCTAT 3252
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3253 CCCACCAGGAGAGAAATTGAGAAGTTAGCTGCCAGTCTATGGCTATGGAAGAGTGACATTGCCTCCCATTTCAG 3326
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3327 TAACAAGAGGAAGAAGTGTGTCCGCGACTGTGAAAAGTACAAGCCTGGTGTGCTGCTAGGTTTTAACATGAAAG 3400
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3401 AATTAAATAAAGTCAAACACGAGATGGATTTTGATGCTGAGTGGCTGTTTGAAAATCACGATGAGAAAGACTCA 3474
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3475 AGAGTCAATGCTAGCAAGACTGTTGACAAAAAGCATAACCTTGGGAAAGAAGATGATAGCTTCTCAGATAGTTT 3548
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3549 TGAACATTTGGAAGAAGAATCCAATGGAAGCGGGAGTCCTTTTGACCCTGTCTTTGAAGTTGAGCCTAAAATTC 3622
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3623 CCAGTGATAATTTAGAGGAGCCTGTACCGAAGGTTATTCCGGAAGGTGCTTTGGAATCTGAGAAGCTAGACCAA 3696
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3697 AAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGGTTCAAAATATGAAACTATCCATTTGACTGAGGAACCAGC 3770
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3771 CAAATTAATGCATGATGCCTCTGATAGTGAGGTAGACCAAGATGATGTAGTTGAGTGGAAAGATGGTGCTTCAC 3844
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3845 CATCTGAGAGTGGGCCTGGTTCCCAACAAATCTCAGACTTTGAGGATAATACATGTGAAATGAAACCAGGAACC 3918
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3919 TGGTCTGATGAGTCTTCCCAGAGTGAAGATGCAAGGAGCAGTAAGCCAGCTGCCAAAAAAAAGGCTACAGTGCA 3992
Query 781 -------------------------------------------------------------------------- 780
Sbjct 3993 AGATGACACAGAGCAGTTAAAATGGAAGAATAGTTCCTATGGAAAAGTTGAAGGGTTTTGGTCCAAGGACCAGT 4066
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4067 CACAGTGGGAAAATGCATCTGAGAATGCAGAGCGCTTACCAAACCCACAGATTGAGTGGCAGAATAGCACAATT 4140
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4141 GACAGTGAGGACGGGGAGCAGTTTGACAGCATGACTGACGGAGTTGCTGATCCCATGCATGGCAGCTTAACTGG 4214
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4215 AGTGAAGCTGAGCAGCCAGCAAGCCTGAGGCCCTGGCGTGCCATAGCATATGCATATGGGCCGTGTTGCATCCT 4288
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4289 GGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTCTAACTGGCACTACCTTGCAAGGACTGGTCAGT 4362
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4363 CAGCAGGCTGTGGGGATGTGTGACCACTGTAGTCTCAGTGGTTATTTCCAAGTCTATGATAGATGACTGGTTGA 4436
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4437 TCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATG 4510
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4511 CACACAGGGAGAAGTAGTTCCTTACCTACCTGCCTTCTCAGCATTTCTTCCCCTCAGATGTTTGGTTGGATGTC 4584
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4585 CTGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTACCAGTCAAATGTGTCTAGTA 4658
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4659 GACTTGGGAACATGGACCGTTTTTTCATGTATCTTCTGAATAGTTGAAATGTATATTTGTACAGTCTTTTAGAC 4732
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4733 CTAAAGTGATGCTTATGACACTGTTACTGTGTGCCCGTCATAGATTGGTTTTTAGTGTTGCCCTTGCTGTGTGA 4806
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4807 TAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTT 4880
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4881 TGCACATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCTCCTGTATTATA 4954
Query 781 -------------------------------------------------------------------------- 780
Sbjct 4955 GAATTTTTTTCTTGTTCTGAGTATCCTTGACATTACAATTGTCAAAAATGGTATTTCAGATCTCTTTCTGAGAC 5028
Query 781 -------------------------------------------------------------------------- 780
Sbjct 5029 CTTTTAAGCTAAAATAACATGCAAGAATTGATTTTACAGCTACTAATTTTGACACCTTTTAGACCTGTAAGAGT 5102
Query 781 -------------------------------------------------------------------------- 780
Sbjct 5103 GTTGTATCAGAGCAACAAGCACAGTTGAGTGCTGCGTTTGGGATATTTAGTTTCCTCTTTAGTTGAGCACCACT 5176
Query 781 -------------------------------------------------------------------------- 780
Sbjct 5177 GGGTGTATTCATTTATACCATCTAATATATGACACACTGTTGTAGTCTGTATGATTTTGTGGTCTTTATTTCTC 5250
Query 781 -------------------------------------------------------------------------- 780
Sbjct 5251 TTTGTATTCATTTTAAGCATCTAAATAAATTGCTGTATTGTGCTTAATGTAAATATTTGCTTTTATTACACACG 5324
