Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07308
• Subject: XR_002958551.1
• Aligned Length: 1099
• Identities: 682
• Gaps: 414

Alignment

Query    1  ---------------------------------------ATGGCCTCCTTGGAGGTCAGTCGTGGTCCTCGCAG  35
                                                   ||||||||||||||.|||||||||.||||||||||
Sbjct    1  TTACGTAATTCCGCTTCCGGCATCTGGCTCAGTTCCGCCATGGCCTCCTTGGAAGTCAGTCGTAGTCCTCGCAG  74

Query   36  GTCTCGGCGGGAGCTGGAAGTGCGCAGTCCACGACAGAACAAATATTCGGTGCTTTTACCTACCTACAACGAGC  109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTCTCGGCGGGAGCTGGAAGTGCGCAGTCCACGACAGAACAAATATTCGGTGCTTTTACCTACCTACAACGAGC  148

Query  110  GCGAGAACCTGCCGCTCATCGTGTGGCTGCTGGTGAAAAGCTTCTCCGAGAGTGGAATCAACTATGAAATTATA  183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCGAGAACCTGCCGCTCATCGTGTGGCTGCTGGTGAAAAGCTTCTCCGAGAGTGGAATCAACTATGAAATTATA  222

Query  184  ATCATAGATGATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGGAGAAGATCTATGGGTCAGACAG  257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCATAGATGATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGGAGAAGATCTATGGGTCAGACAG  296

Query  258  AATTCTTCTAAGACCACGAGAGAAAAAGTTGGGACTAGGAACTGCATATATTCATGGAATGAAACATGCCACAG  331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AATTCTTCTAAGACCACGAGAGAAAAAGTTGGGACTAGGAACTGCATATATTCATGGAATGAAACATGCCACAG  370

Query  332  GAAACTACATCATTATTATGGATGCTGATCTCTCACACCATCCAAAATTTATTCCTGAATTTATTAGGAAGCAA  405
            |||||||||||||||||||||||||||||||||||||||||                          |||||||
Sbjct  371  GAAACTACATCATTATTATGGATGCTGATCTCTCACACCAT--------------------------GAAGCAA  418

Query  406  AAGGAGGGTAATTTTGATATTGTCTCTGGAACTCGCTACAAAGGAAATGGAGGTGTATATGGCTGGGATTTGAA  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  419  AAGGAGGGTAATTTTGATATTGTCTCTGGAACTCGCTACAAAGGAAATGGAGGTGTATATGGCTGGGATTTGAA  492

Query  480  AAGAAAAATAATCAGCCGTGGGGCCAATTTTTTAACTCAGATCTTGCTGAGACCAGGAGCATCTGATTTAACAG  553
            |||||||||||                                                               
Sbjct  493  AAGAAAAATAA---------------------------------------------------------------  503

Query  554  GAAGTTTCAGATTATACCGAAAAGAAGTTCTAGAGAAATTAATAGAAAAATGTGTTTCTAAAGGCTACGTCTTC  627
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  504  ------TCAGATTATACCGAAAAGAAGTTCTAGAGAAATTAATAGAAAAATGTGTTTCTAAAGGCTACGTCTTC  571

Query  628  CAGATGGAGATGATTGTTCGGGCAAGACAGATGAATTATACTATTGGCGAGGTTCCAATATCATTTGTGGATCG  701
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct  572  CAGATGGAGATGATTGTTCGGGCAAGACAGTTGAATTATACTATTGGCGAGGTTCCAATATCATTTGTGGATCG  645

Query  702  TGTTTATGGTGAATCCAAGTTGGGAGGAAATGAAATAGTATCTTTCTTGAAAGGATTATTGACTCTTTTTGCTA  775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  646  TGTTTATGGTGAATCCAAGTTGGGAGGAAATGAAATAGTATCTTTCTTGAAAGGATTATTGACTCTTTTTGCTA  719

Query  776  CTACA---------------------------------------------------------------------  780
            |||||                                                                     
Sbjct  720  CTACATAAAAGAAAGATACTCATTTATAGTTACGTTCATTTCAGGTTAAACATGAAAGAAGCCTGGTTACTGAT  793

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct  794  TTGTATAAAATGTACTCTTAAAGTATAAAATATAAGGTAAGGTAAATTTCATGCATCTTTTTATGAAGACCACC  867

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct  868  TATTTTATATTTCAAATTAAATAATTTTAAAGTTGCTGGCCTAATGAGCAATGTTCTCAATTTTCGTTTTCATT  941

Query  781  ---------------------------------------------------------------  780
                                                                           
Sbjct  942  TTGCTGTATTGAGACCTATAAATAAATGTATATTTTTTTTTGCATAAAGTATTGCTGCCTTCA  1004