Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07309
Subject:
NR_133648.1
Aligned Length:
1126
Identities:
779
Gaps:
346

Alignment

Query    1  -----------------------------------------ATGGCCTCCTTGGAAGTCAGTCGTAGTCCTCGC  33
                                                     |||||||||||||||||||||||||||||||||
Sbjct    1  CATTACGTAATTCCGCTTCCGGCATCTGGCTCAGTTCCGCCATGGCCTCCTTGGAAGTCAGTCGTAGTCCTCGC  74

Query   34  AGGTCTCGGCGGGAGCTGGAAGTGCGCAGTCCACGACAGAACAAATATTCGGTGCTTTTACCTACCTACAACGA  107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGGTCTCGGCGGGAGCTGGAAGTGCGCAGTCCACGACAGAACAAATATTCGGTGCTTTTACCTACCTACAACGA  148

Query  108  GCGCGAGAACCTGCCGCTCATCGTGTGGCTGCTGGTGAAAAGCTTCTCCGAGAGTGGAATCAACTATGAAATTA  181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCGCGAGAACCTGCCGCTCATCGTGTGGCTGCTGGTGAAAAGCTTCTCCGAGAGTGGAATCAACTATGAAATTA  222

Query  182  TAATCATAGATGATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGGAGAAGATCTATGGGTCAGAC  255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TAATCATAGATGATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGGAGAAGATCTATGGGTCAGAC  296

Query  256  AGAATTCTTCTAAGACCACGAGAGAAAAAGTTGGGACTAGGAACTGCATATATTCATGGAATGAAACATGCCAC  329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGAATTCTTCTAAGACCACGAGAGAAAAAGTTGGGACTAGGAACTGCATATATTCATGGAATGAAACATGCCAC  370

Query  330  AGGAAACTACATCATTATTATGGATGCTGATCTCTCACACCATCCAAAATTTATTCCTGAATTTATTAGGAAGC  403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGAAACTACATCATTATTATGGATGCTGATCTCTCACACCATCCAAAATTTATTCCTGAATTTATTAGGAAGC  444

Query  404  AAAAGGAGGGTAATTTTGATATTGTCTCTGGAACTCGCTACAAAGGAAATGGAGGTGTATATGGCTGGGATTTG  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAAGGAGGGTAATTTTGATATTGTCTCTGGAACTCGCTACAAAGGAAATGGAGGTGTATATGGCTGGGATTTG  518

Query  478  AAAAGAAAAATAAT----------------------CAGCCGTGGGGCCAATTTTTTAACTCAGATCTTGCTGA  529
            ||||||||||||||                      ||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAAAGAAAAATAATCAGATCTGATTGTTTTATTTGGCAGCCGTGGGGCCAATTTTTTAACTCAGATCTTGCTGA  592

Query  530  GACCAGGAGCATCTGATTTAACAGGAAGTTTCAGATTATACCGAAAAGAAGTTCTAGAGAAATTAATAGAAAAA  603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GACCAGGAGCATCTGATTTAACAGGAAGTTTCAGATTATACCGAAAAGAAGTTCTAGAGAAATTAATAGAAAAA  666

Query  604  TGTGTTTCTAAAGGCTACGTCTTCCAGATGGAGATGATTGTTCGGGCAAGACAGTTGAATTATACTATTGGCGA  677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGTGTTTCTAAAGGCTACGTCTTCCAGATGGAGATGATTGTTCGGGCAAGACAGTTGAATTATACTATTGGCGA  740

Query  678  GGTTCCAATATCATTTGTGGATCGTGTTTATGGTGAATCCAAGTTGGGAGGAAATGAAATAGTATCTTTCTTGA  751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGTTCCAATATCATTTGTGGATCGTGTTTATGGTGAATCCAAGTTGGGAGGAAATGAAATAGTATCTTTCTTGA  814

Query  752  AAGGATTATTGACTCTTTTTGCTACTATA---------------------------------------------  780
            |||||||||||||||||||||||||||.|                                             
Sbjct  815  AAGGATTATTGACTCTTTTTGCTACTACATAAAAGAAAGATACTCATTTATAGTTACGTTCATTTCAGGTTAAA  888

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct  889  CATGAAAGAAGCCTGGTTACTGATTTGTATAAAATGTACTCTTAAAGTATAAAATATAAGGTAAGGTAAATTTC  962

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct  963  ATGCATCTTTTTATGAAGACCACCTATTTTATATTTCAAATTAAATAATTTTAAAGTTGCTGGCCTAATGAGCA  1036

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1037  ATGTTCTCAATTTTCGTTTTCATTTTGCTGTATTGAGACCTATAAATAAATGTATATTTTTTTTTGCAAAAAAA  1110

Query  781  ----------------  780
                            
Sbjct 1111  AAAAAAAAAAAAAAAA  1126

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