Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07361
Subject:
XM_017312902.1
Aligned Length:
1980
Identities:
1401
Gaps:
414

Alignment

Query    1  ATGGAGCACATCCGCACGCCCAAGGTTGAAAATGTCCGCTTGGTAGATCGAGTGTCTCCTAAAAAAGCAGCTCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTACTTTGTATTTGACGGCTACCCATGTCATATTCGTGGAAAATTCACCTGACGCAAGAAAAGAAACATGGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTCTTCACAGTCAGATTTCCACCATTGAGAAACAGGCAACAACCGCTACCGGATGCCCTCTGCTGATTCGCTGC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AAGAACTTTCAGATAATACAGCTCATCATACCTCAGGAAAGAGATTGCCACGACGTGTACATCTCCCTGATACG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCTTGCAAGGCCAGTGAAATATGAGGAGTTATACTGCTTTTCATTCAACCCCATGCTGGATAAAGAAGAAAGAG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGCAAGGCTGGGTGCTGATCGATCTTAGTGAAGAATACACGCGGATGGGCCTCCCTAATCATTACTGGCAGCTC  444
                                                        ||||||||||||.||.||||.|||||||||
Sbjct    1  --------------------------------------------ATGGGCCTCCCTGATAATTATTGGCAGCTC  30

Query  445  AGCGATGTGAATAGAGACTATAGAGTCTGTGACTCTTATCCTACTGAACTGTACGTTCCCAAATCGGCCACGGC  518
            ||||||||||||||||||||.|||||.|||||||||||.||.||.|||||||||||.||||.||||||||||||
Sbjct   31  AGCGATGTGAATAGAGACTACAGAGTTTGTGACTCTTACCCCACGGAACTGTACGTCCCCAGATCGGCCACGGC  104

Query  519  ACACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTTCCTGTCCTTTCTTACTATTATAAAGATA  592
            |||||||||.|||||.||.|||||.||||||||.||||||||||||||||.||||||.|||||.|.||||||.|
Sbjct  105  ACACATCATCGTGGGCAGCTCCAAGTTCCGGAGCAGACGGCGATTTCCTGCCCTTTCCTACTACTGTAAAGACA  178

Query  593  ACCACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTCAGTGCCCGGTGCCTGGAGGACGAGCAGATG  666
            .|||.||||||||||||.||||||||||||||||.|||||||||||.||.||||||||||||||.|||||||||
Sbjct  179  GCCATGCCTCCATCTGCAGGAGCAGCCAGCCCCTTTCCGGCTTCAGCGCTCGGTGCCTGGAGGATGAGCAGATG  252

Query  667  CTCCAGGCCATTAGGAAAGCCAATCCAGGAAGTGACTTCGTTTATGTCGTTGACACCCGGCCTAAACTTAATGC  740
            |||||.|||||.||||||||||||||.||||||||||||.||||||||||.|||||..||||||||||||||||
Sbjct  253  CTCCAAGCCATCAGGAAAGCCAATCCTGGAAGTGACTTCATTTATGTCGTGGACACAAGGCCTAAACTTAATGC  326

Query  741  AATGGCAAATCGTGCTGCAGGGAAAGGCTATGAGAATGAAGACAATTATTCCAATATCAAGTTTCAGTTTATCG  814
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  327  GATGGCAAATCGTGCTGCAGGGAAAGGCTATGAGAATGAAGACAATTATTCCAATATCAAGTTTCAGTTTATCG  400

Query  815  GGATAGAGAACATCCATGTCATGAGGAACAGTCTGCAGAAAATGCTGGAAGTGTGTGAACTTAAATCTCCCTCC  888
            |.||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.
Sbjct  401  GCATAGAGAACATCCACGTCATGAGGAACAGTCTTCAGAAAATGCTGGAAGTGTGTGAACTTAAATCTCCCTCT  474

Query  889  ATGAGTGATTTCCTGTGGGGTCTGGAGAACTCTGGCTGGTTAAGGCACATTAAAGCCATAATGGATGCAGGAAT  962
            ||||||||||||||||||||.|||||||||||.||||||.|.||||||||.||||||||.|||||||||||.||
Sbjct  475  ATGAGTGATTTCCTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCACATCAAAGCCATCATGGATGCAGGGAT  548

Query  963  CTTCATTGCAAAGGCAGTGTCAGAGGAAGGGGCAAGTGTGCTTGTTCACTGTTCTGATGGCTGGGACAGGACCG  1036
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||.||.|
Sbjct  549  CTTCATTGCAAAGGCAGTTTCAGAGGAAGGGGCAAGTGTGCTTGTTCACTGTTCTGACGGCTGGGACAGAACGG  622

Query 1037  CTCAGGTGTGCTCGGTGGCAAGCCTGCTGCTGGACCCTCACTACCGGACTCTGAAGGGCTTCATGGTATTAATT  1110
            |.|||||||||||||||||.||||||||||||||||||.||||||||||||||||.||.|||||||||||||||
Sbjct  623  CCCAGGTGTGCTCGGTGGCTAGCCTGCTGCTGGACCCTTACTACCGGACTCTGAAAGGATTCATGGTATTAATT  696

Query 1111  GAAAAGGACTGGATTTCCTTTGGTCATAAGTTTAATCACCGATATGGCAATCTAGATGGTGACCCAAAAGAAAT  1184
            ||||||||||||||||||||.||.|||||.||||||||..||||||||||..||||||||||||||||||||||
Sbjct  697  GAAAAGGACTGGATTTCCTTCGGACATAAATTTAATCATAGATATGGCAACTTAGATGGTGACCCAAAAGAAAT  770

Query 1185  CTCTCCAGTTATTGACCAGTTCATTGAGTGTGTTTGGCAGTTAATGGAACAATTTCCCTGTGCCTTTGAGTTCA  1258
            |||||||||.||.||||||||||||||||||||.||||||.|||.||||||.||.||.||.|||||||||||||
Sbjct  771  CTCTCCAGTAATCGACCAGTTCATTGAGTGTGTCTGGCAGCTAACGGAACAGTTCCCTTGCGCCTTTGAGTTCA  844

Query 1259  ATGAGAGGTTTTTGATTCACATTCAACATCACATTTATTCCTGCCAGTTTGGAAACTTCCTATGTAACAGCCAA  1332
            |.|||||||||.|||.|||||||||.|||||..|||||||||||||||||||.||||||||.|||||.|||||.
Sbjct  845  ACGAGAGGTTTCTGACTCACATTCAGCATCATGTTTATTCCTGCCAGTTTGGGAACTTCCTGTGTAATAGCCAG  918

Query 1333  AAGGAGAGACGAGAACTCAAGATTCAAGAAAGAACATACTCATTATGGGCTCACCTGTGGAAGAATCGGGCCGA  1406
            ||||||||.||||||||||||||||||||||||||.|||||.||.|||.|..||||||||||||||||.||.||
Sbjct  919  AAGGAGAGGCGAGAACTCAAGATTCAAGAAAGAACCTACTCTTTGTGGTCCAACCTGTGGAAGAATCGAGCTGA  992

Query 1407  CTACCTGAATCCTCTGTTTAGAGCTGATCACAGCCAGACTCAGGGAACCCTTCATCTCCCTACAACACCATGTA  1480
            ||||||.||||||||||||||||||||.|||||.|||||.|||||.|.|||||||||.||||||.|.|||||.|
Sbjct  993  CTACCTCAATCCTCTGTTTAGAGCTGACCACAGTCAGACCCAGGGGAGCCTTCATCTGCCTACAGCTCCATGCA  1066

Query 1481  ACTTCATGTACAAGTTTTGGAGTGGAATGTATAACCGCTTTGAAAAGGGGATGCAGCCCCGACAGTCAGTTACA  1554
            ||||||..||.||||||||||.|||.||||||||||||||||||||||||.|||||||.||||||||.||||||
Sbjct 1067  ACTTCACCTATAAGTTTTGGAATGGGATGTATAACCGCTTTGAAAAGGGGTTGCAGCCTCGACAGTCTGTTACA  1140

Query 1555  GATTACCTAATGGCAGTGAAGGAAGAAACTCAGCAGCTAGAGGAAGAACTAGAGGCCCTGGAAGAAAGGCTGGA  1628
            ||||||||.|||||.||||||||.||..|.||||||||.|||||||||||.|||.||||.||||||||||||||
Sbjct 1141  GATTACCTCATGGCTGTGAAGGAGGAGTCCCAGCAGCTGGAGGAAGAACTGGAGTCCCTAGAAGAAAGGCTGGA  1214

Query 1629  AAAAATTCAAAAGGTCCAGTTAAATTGCACTAAGGTGAAGAGTAAGCAAAGTGAGCCCAGCAAGCACTCAGGGT  1702
            |||||||||.||.|||||.|||.||.|.||.||.|||||||||||||||||||||||||||||.|||||.||||
Sbjct 1215  AAAAATTCAGAAAGTCCACTTACATGGTACCAAAGTGAAGAGTAAGCAAAGTGAGCCCAGCAAACACTCGGGGT  1288

Query 1703  TTTCTACCTCAGACAACAGCATAGCCAACACTCCCCAGGATTACAGTGGGAATATGAAATCATTTCCATCCCGG  1776
            |.||||||||||||.||||||.|||||||||.||.|||||||||||||||||.|..||.||.||.||||||.||
Sbjct 1289  TCTCTACCTCAGACCACAGCACAGCCAACACCCCTCAGGATTACAGTGGGAACAGCAAGTCCTTCCCATCCAGG  1362

Query 1777  AGCCCTTCACAAGGCGATGAAGATTCTGCTCTGATTCTAACCCAAGACAATCTGAAAAGTTCAGATCCAGATCT  1850
            |||||.||.||.||.||||||||||||||||||||||||||||||||||||.|.|||||.|||||.||.||.||
Sbjct 1363  AGCCCGTCCCAGGGTGATGAAGATTCTGCTCTGATTCTAACCCAAGACAATTTAAAAAGCTCAGACCCCGACCT  1436

Query 1851  GTCAGCCAACAGTGACCAAGAGTCCGGGGTGGAGGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCAC  1924
            .||||..||.|||||.||||||||.|||||||||||||||||||||||.|||||.|||||||||||||||||||
Sbjct 1437  CTCAGTGAATAGTGATCAAGAGTCTGGGGTGGAGGATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCAC  1510

Query 1925  CGAGTGAAGATAGTGGCAAGGACCGGGATTCTGATGAAGCCGTGTTTCTCACTGCC  1980
            |.||.|||||.|||||||||||||||||.||.||.|||||.|||||||||||||||
Sbjct 1511  CCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTTCTCACTGCC  1566

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