Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07403
- Subject:
- NM_004796.6
- Aligned Length:
- 3208
- Identities:
- 1214
- Gaps:
- 1937
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGGCTCGGACGACTTCTTCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTGCCTGGCTCCCCTGTCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGAATAATGACATCCGTCTGGAGCTGTCTCGCCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGATTGCGGACACCAAGATGAAAATCTATGGCGAAGTTGTGTTTAAGTGTGAGAATGTGGCCACACTGGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACACTAAACGTATGGGCTCCATCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGACTTCCGCACCACAGAGCCCAATGGCCTGATCCTCTTCACTCATGGAAAGCCCCAAGAGAGGAAGGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTGCCGTGGAACTCCTCGATGGCAACCTGTACTTGCTGCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTCAGAAGAAAGCCAATGATGGGGAATGGTACCATGTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATTCAGCGAGATGGCAGATCAGGTACTATATCAGTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGAGATCCTGGACCTGGAAGGAGACATGTACCTGGGAGGGCTGCCGGAGAACCGTGCTGGCCTTATTCTCCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGAGCTGTGGACTGCCATGCTCAACTATGGCTACGTGGGCTGCATCCGCGACCTATTCATTGATGGGCGCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAGAACATTCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCAGTGTGACAGCTACCCCTGCAAGAATAATGCTGTGTGCAAGGACGGCTGGAACCGCTTCATCTGCGACTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCGGCACCGGATACTGGGGAAGAACCTGCGAAAGGGAGGCATCCATCCTGAGCTATGATGGTAGCATGTACAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGATCATCATGCCCATGGTCATGCATACTGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCCCAGCGAGCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGGGCTGCTGGTGGCTACGACCTCCAGGGACTCTGCCGACACCCTGCGTCTGGAGCTGGATGGGGGGCGTGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGCTCATGGTTAACTTAGACTGTATCAGGATAAACTGTAACTCCAGCAAAGGACCAGAGACCTTGTATGCAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGAAGCTCAATGACAACGAGTGGCACACCGTTCGGGTGGTGCGGAGAGGAAAAAGCCTTAAGTTAACCGTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGATGATGTGGCTGAGGGTACAATGGTGGGAGACCATACCCGTTTGGAGTTCCACAACATTGAAACGGGAATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGACTGAGAAACGCTACATCTCCGTTGTCCCCTCCAGCTTTATTGGCCATCTGCAGAGCCTCATGTTTAATGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTTCTCTACATTGACTTGTGCAAAAATGGTGACATTGATTATTGTGAGCTGAAGGCTCGTTTTGGACTGAGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACATCATCGCTGACCCTGTCACCTTTAAGACCAAGAGCAGCTACCTGAGCCTTGCCACTCTTCAGGCTTACACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCATGCACCTCTTCTTCCAGTTCAAGACCACCTCACCAGATGGCTTCATTCTCTTCAATAGTGGTGATGGCAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGACTTCATTGCAGTCGAGCTTGTCAAGGGGTATATACACTACGTTTTTGACCTCGGAAACGGTCCCAATGTGA 1702
Query 1 ---------------------------ATG--CACCTG----AGAAT-------CCACGCGAGAC----GGAGC 30
||| .|||.| |.||| .|||.||.||| |.|.|
Sbjct 1703 TCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAATGTCGTCATCACTCGGGACAATAGTAAC 1776
Query 31 CCTCCTCGCC-------GGCCGGCC----TGGACGCTTGGG------------------ATCTGG--------- 66
.|||.|.||| ||.| .|| |||.|.||..|| ||||||
Sbjct 1777 ACTCATAGCCTGAAAGTGGAC-ACCAAAGTGGTCACTCAGGTTATCAATGGTGCCAAAAATCTGGATTTGAAAG 1849
Query 67 ------------TTCCTGTTCTG------GGGATGTA-----------------TCGTCAGCTCT---GTATGG 102
|..|||.|||| ||.||||| ||||...|||| | ||||
Sbjct 1850 GTGATCTCTATATGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTCGAG-ATGG 1922
Query 103 AGTTC------TTCTA--AT--GTAG-CTT---------CCT------CCTCCTCCA----CCTCTTCCTCGCC 146
..||| .|||| || ||.| ||| ||| ||||.||.| .||||||.|||..
Sbjct 1923 CTTTCAGGGCTGTCTAGCATCAGTGGACTTGAATGGACGCCTGCCAGACCTCATCAATGATGCTCTTCATCGGA 1996
Query 147 GGGGTCTCACTCTCAGCACGAGC--------------ACCATTTCCA--TGGCAGCAAGCATCACTCA-GTGCC 203
|.|| .|||..||||| .|||.|.||| ||.|||.||| |.||| |||||
Sbjct 1997 GCGG--------ACAGATCGAGCGTGGCTGTGAAGGACCCAGTACCACCTGCCAGGAAG----ATTCATGTGCC 2058
Query 204 TA------TTTCT------ATCTATCG------TTCCCCTGT--TTCCCTTCGAGGA-----------GGACAC 246
.| ..||| |.|.||.| |||.||||| || .|||.|.|| |||.||
Sbjct 2059 AACCAGGGGGTCTGCATGCAACAATGGGAGGGCTTCACCTGTGATT--GTTCTATGACCTCTTATTCTGGAAAC 2130
Query 247 ------------GCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAA 308
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2131 CAGTGCAATGATCCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAA 2204
Query 309 TGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCC 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205 TGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCC 2278
Query 383 GCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTC 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279 GCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTC 2352
Query 457 AACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACG 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2353 AACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACG 2426
Query 531 CTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCC 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2427 CTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCC 2500
Query 605 GGCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGC 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2501 GGCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGC 2574
Query 679 CAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAAT 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2575 CAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAAT 2648
Query 753 CAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAG 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2649 CAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAG 2722
Query 827 AAATGTCTACTACTGTCATGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCC 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2723 AAATGTCTACTACTGTCATGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCC 2796
Query 901 AGCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATG 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2797 AGCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATG 2870
Query 975 TGAGCCGAGTACAGGTAGGTCAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGA 1048
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2871 TGAGCCGAGTA---------CAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGA 2935
Query 1049 TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTC 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2936 TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTC 3009
Query 1123 CTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAG 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3010 CTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAG 3083
Query 1197 CAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGA 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3084 CAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGA 3157
Query 1271 AAAACAAGGACAGGGAGCATTACGTG 1296
|||||||||||||||||.||||||||
Sbjct 3158 AAAACAAGGACAGGGAGTATTACGTG 3183
