Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07460
- Subject:
- XM_006522247.3
- Aligned Length:
- 1796
- Identities:
- 1239
- Gaps:
- 403
Alignment
Query 1 ATGAAGCCAACAGGTACAGACCCAAGGATCTTATCTATAGCTGCTGAAGTTGCAAAAAGCCCTGAGCAGAATGT 74
|||||||||.|.||||||||||||||||||||.|||.||||||||||||||||||||||.|||||.||.|||||
Sbjct 1 ATGAAGCCAGCCGGTACAGACCCAAGGATCTTGTCTTTAGCTGCTGAAGTTGCAAAAAGTCCTGAACAAAATGT 74
Query 75 CCCTGTTATACTGTTGAAGTTAAAAGAAATAATAAACATCACACCTTTAGGAAGCTCAGAGTTGAAGAAAATCA 148
.|||||||||.|.|||||||||||||||||||||||||.|||.|||||.||||||||||||||.||||||.|.|
Sbjct 75 TCCTGTTATATTATTGAAGTTAAAAGAAATAATAAACAACACCCCTTTGGGAAGCTCAGAGTTAAAGAAAGTTA 148
Query 149 AACAAGATATATATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTATTCTCGAATCCAG 222
||||||||||||||||||||||.||||||||.|||||.||.|||||||||||||||||||.|||||||||||||
Sbjct 149 AACAAGATATATATTGTTATGACCTCATTCAGTATTGTCTATTGGTCCTCAGTCAAGATTCTTCTCGAATCCAG 222
Query 223 GGTGGTTGGACTACAATTTCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGGCTTGGAGCCAGGAGAAGA 296
|||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||.||||||||||||||
Sbjct 223 GGTGGTTGGTCTACAATTTCCCAGCTTACACAGATACTAAGCCATTGCTGTGTGGGCTTAGAGCCAGGAGAAGA 296
Query 297 TGCAGAGGAATTTTACAATGAATTACTTCCATCAGCTGCAGAAAATTTTCTAGTTTTGGGGAGACAATTACAAA 370
||.|||.|||||||||||.||.|||||||||||||||||.|||||||||||..|..||||||||...|||||||
Sbjct 297 TGGAGAAGAATTTTACAAGGAGTTACTTCCATCAGCTGCTGAAAATTTTCTTATCCTGGGGAGAAGGTTACAAA 370
Query 371 CATGTTTTATCAATGCAGCTAAGGCTGAAGAAAAAGATGAATTACTACACTTTTTCCAAATTGTGACTGATTCT 444
|||||||.|||||||||.||||||.||||||..|||||.||||||||||.||||||||||||||||||||||||
Sbjct 371 CATGTTTCATCAATGCAACTAAGGGTGAAGAGCAAGATAAATTACTACATTTTTTCCAAATTGTGACTGATTCT 444
Query 445 CTCTTCTGGCTTTTGGGAGGCCATGTTGAACTTATTCAGAATGTACTACAAAGTGATCATTTCTTACATTTACT 518
|||||||||.|.||||||||.||||||.||||.||.|||||||||||.||.|||||||||||||||||.||.||
Sbjct 445 CTCTTCTGGTTATTGGGAGGTCATGTTCAACTGATACAGAATGTACTGCAGAGTGATCATTTCTTACACTTGCT 518
Query 519 GCAAGCTGACAATGTCCAAATAGGATCTGCAGTCATGATGATGCTACAGAATATATTACAGATCAA-------- 584
||||.||||||||||.||.||||||.||.|||||||||...||||||||||||||.||||||||||
Sbjct 519 GCAAACTGACAATGTTCAGATAGGAGCTTCAGTCATGACTCTGCTACAGAATATACTACAGATCAACAGTGGTA 592
Query 585 -------------------------------------------------------------------------- 584
Sbjct 593 ATTTACTCAAAATAGAAGGAAAAGCCCTGCATTCTATTTTAGATGAAATTCTTTTCAAGCTTTTGTCAACTCCT 666
Query 585 -------------------------------------------------------------------------- 584
Sbjct 667 AGTCCAGTCATAAGAAGTACTGCTACAAAGCTCCTGCTAGTACTGGCTGAATCCCATCAGGAAATTTTGATTTT 740
Query 585 -------------------------------------------------------------------------- 584
Sbjct 741 ACTGAGACTAAGTGCCTGCTATAAAGGACTTAGAAGTCTGCTAAATAAACAGGAAACTCTTACAGAATTTAGTC 814
Query 585 -------------------------------------------------------------------------- 584
Sbjct 815 GAGAACTTAGACAGCTCGTTGATCTTTTAACCCCTAAGATCCATCAGGAAGTAGAAGAACAGAAACTACATAAA 888
Query 585 -------------------------------------------------------------------------- 584
Sbjct 889 GCAGCTTGCTTGATTCAAGCCTATTGGAAAGGTTTCCAGACCAGAAAGAGATTAAAGAAGCTTCCGTCTGCTGT 962
Query 585 ---------------------CAGATCCAAACGATCAAAGATGTTGCTGGAGATAAATAGGCAGAAGGAAGAAG 637
||||||.||||||.||||||||.||.|||||.|||||||||||||||||||||
Sbjct 963 GATTGCCTTGCAGAGGAGTTTCAGATCTAAACGAACAAAGATGATGTTGGAGCTAAATAGGCAGAAGGAAGAAG 1036
Query 638 AGGACCTCAAATTACAATTGCAACTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGCA-GC-TGAGTA 709
|.|||||||.||||.|||||||||||||||||||||||||.|||||.|||||.|||||.| || || |||..|
Sbjct 1037 AAGACCTCAGATTAAAATTGCAACTTCAAAGACAGAGAGCAATGAGGCTTTCACGAGAGT--CACGCTTGAACA 1108
Query 710 TGCTCGAAATAGTTCATCCAGGTCAGGTGGAGAAACACTATCGGGAAATGGAAGAGAAATCAGCACTGATTATC 783
||||.||||||.|||||||||||||.||||||||..||.||.|||||||||||||||||||||||.|||.|||.
Sbjct 1109 TGCTTGAAATAATTCATCCAGGTCAAGTGGAGAAGTACAATAGGGAAATGGAAGAGAAATCAGCATTGACTATT 1182
Query 784 CAGAAACATTGGAGAGGGTACAGGGAAAGGAAAAATTTTCACCAACAGAGGCAGTCTCTCATAGAGTATAAAGC 857
||||||||||||||.|||||||||||||||||.|||||||.|||||||||||..|||||||.||||||||||||
Sbjct 1183 CAGAAACATTGGAGGGGGTACAGGGAAAGGAAGAATTTTCGCCAACAGAGGCCATCTCTCACAGAGTATAAAGC 1256
Query 858 AGCTGTCACACTTCAAAGAGCAGCGCTTAAATTCCTAGCGAAGTACCGTAAGAAAAAGAAACTATTTGCTCCTT 931
|||||||||||||||||||||||..||||||||||||||.||||.||||||||||||||||||.|||||..|||
Sbjct 1257 AGCTGTCACACTTCAAAGAGCAGTTCTTAAATTCCTAGCAAAGTGCCGTAAGAAAAAGAAACTCTTTGCCTCTT 1330
Query 932 GGCGAGGACTCCAAGAACTCACTGATGCACGCCGAGTTGAACTGAAGAAACGAGTGGATGACTATGTCAGAAGA 1005
|||..|||||.|||||||||||||||||||||.||||||||||||||.|||.||||||.||.|||||||.||||
Sbjct 1331 GGCATGGACTTCAAGAACTCACTGATGCACGCAGAGTTGAACTGAAGCAACAAGTGGACGATTATGTCAAAAGA 1404
Query 1006 CATTTGGGCTCTCCAATGTCAGATGTGGTCAGTAGGGAGCTCCATGCCCAAGCTCAAGAACGACTGCAACACTA 1079
||...|.||||||..||||||||.|.||.|||.||.|||||||||||.|||||.|||||||||||.||.|||||
Sbjct 1405 CACCCGTGCTCTCAGATGTCAGAGGCGGCCAGCAGAGAGCTCCATGCACAAGCACAAGAACGACTTCAGCACTA 1478
Query 1080 CTTTATGGGCAGGGCCCTAGAAGAGCGAGCCCAGCAGCACAGAGAAGCTCTGATAGCACAGATCAGCACCAACG 1153
.||||||||.||.|||.|||||||||||||||||||.||||||||||||.||||.||.||||||||||||||..
Sbjct 1479 TTTTATGGGAAGAGCCATAGAAGAGCGAGCCCAGCAACACAGAGAAGCTTTGATGGCTCAGATCAGCACCAATA 1552
Query 1154 TTGAACAGCTAATGAAGGCACCAAGTCTGAAGGAGGCAGAAGGGAAAGAACCTGAGCTCTTCCTAAGTAGATCC 1227
||||||||||.||||||||||||||||||||||||||||||||.||.|||||.||||..||||||||||||||.
Sbjct 1553 TTGAACAGCTGATGAAGGCACCAAGTCTGAAGGAGGCAGAAGGAAAGGAACCCGAGCAATTCCTAAGTAGATCT 1626
Query 1228 AGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCATCTCACAACCCTGAAGCACATACAAGCACCCTGGTGGAAGAA 1301
|||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||
Sbjct 1627 AGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCATCTTACCACCCTGAAGCACATACAAGCACCCTGGTGGAAGAA 1700
Query 1302 GCTTGGAGAAGAATCTGGAGATGAGATTGATGTTCCAAAGGATGAGCTTAGTATAGAATTAGAAAATTTATTCA 1375
|||||||||||||.|.||.||||||.|||||||||||||||||||||||||||||||.||||.||..|||||.|
Sbjct 1701 GCTTGGAGAAGAACCAGGGGATGAGGTTGATGTTCCAAAGGATGAGCTTAGTATAGATTTAGGAATGTTATTTA 1774
Query 1376 TTGGTGGAACCAAACCACCT 1395
|.||||||||||||||.||.
Sbjct 1775 TCGGTGGAACCAAACCTCCC 1794
