Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07510
- Subject:
- XR_944849.3
- Aligned Length:
- 3849
- Identities:
- 2432
- Gaps:
- 1416
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATGCTGTTTGGCGACTCGTCGCCATTCCCGGAGCAGGTCGGCCTCGGCCCAGGGGCGAGTATCCGTTGCTGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGAGACACTAGTCCCCGACACCGAGACAGCCAGCCCTCTCCCCTGCCTCGCGGCGGGAGAGCGTGTCCGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCGGCCGGCGGGGCTCGCGCAACCTCCCTCGCCTCCCCTTCCCCCGCAGCCTCCGCCCCGCCAGGCCCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGACTCCCGAGCCCCGGCCTCCTCGTCCTCGGTCGCCGCTGCCGCCGGGCTTAACAGCCCCGTCCGCCGCTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTCCTAGTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACCGCTGCCGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGACCCCCGCCGGCCCTGAACGCCATGAGCCTGGGTCCCCGCCGCGCCCGCTCCGCTCCGACTGCCGTCGCCG 444
Query 1 ---------------ATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGG 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCGAGGCCCCCGTTGATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGG 518
Query 60 CTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAG 592
Query 134 CCGGCGAGTCTAAACCCAAGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTT 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCGGCGAGTCTAAACCCAAGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTT 666
Query 208 TCCTACCCCAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACTTTTAACAA 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCTACCCCAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACTTTTAACAA 740
Query 282 GATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGG 814
Query 356 TAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAAGAAGATCAACCTGAACCACTTG 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAAGAAGATCAACCTGAACCACTTG 888
Query 430 TTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGGACATGGTAGCTGGGGAAAGAG 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGGACATGGTAGCTGGGGAAAGAG 962
Query 504 GAACAAGTGGGGACATAAGCCTTTTAACAAGGAACTCTTTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAG 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAACAAGTGGGGACATAAGCCTTTTAACAAGGAACTCTTTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAG 1036
Query 578 ACCAAGACTACACAGCTCATTTTGCTGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATT 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCAAGACTACACAGCTCATTTTGCTGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATT 1110
Query 652 TGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACA 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACA 1184
Query 726 CATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTT 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTT 1258
Query 800 ACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAGTCACATCAGTATGTTGTTGGTGATACC 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAGTCACATCAGTATGTTGTTGGTGATACC 1332
Query 874 ATTACGATGCAGCTGATGAAGAGGGAGAAAGGGGTGTTGGTGGCTTTGCCCAAATCCAAATGGATGAATGTAGA 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATTACGATGCAGCTGATGAAGAGGGAGAAAGGGGTGTTGGTGGCTTTGCCCAAATCCAAATGGATGAATGTAGA 1406
Query 948 CCATCCCATTCATCTAGGAGATGAACAGCACAGCCAGTACTCCAAGTTTCTGCTGGCCTCTAAGGAGCAGGTGC 1021
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1407 CCATCCCATTCATCTAGGAGATGAACAGCACAGCCAGTACTCCAAGTTGCTGCTGGCCTCTAAGGAGCAGGTGC 1480
Query 1022 TGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCC 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCC 1554
Query 1096 TGCTTTATTGAGGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGCTCTGTCGGGATTGGCCGGAAGCAGAAG 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGCTTTATTGAGGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGCTCTGTCGGGATTGGCCGGAAGCAGAAG 1628
Query 1170 GGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGGCTCCCTTGGCGAAGGAGTCTGTTTTTC 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGGCTCCCTTGGCGAAGGAGTCTGTTTTTC 1702
Query 1244 AACCCAGGA---------------AGGGTGTGCTGGAGTATCTGTCTGCCTTCGATGAAGAAACCACGGAAGTT 1302
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AACCCAGGAAGAGTTTGCTGCAACAGGGTGTGCTGGAGTATCTGTCTGCCTTCGATGAAGAAACCACGGAAGTT 1776
Query 1303 TGTTCTCTGGACACTCCTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGTGTCTGAACCAGA 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TGTTCTCTGGACACTCCTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGTGTCTGAACCAGA 1850
Query 1377 GCCTGAGGGGTTGCCAGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGACCATTTGCA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCCTGAGGGGTTGCCAGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGACCATTTGCA 1924
Query 1451 CTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTT 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTT 1998
Query 1525 TACCAAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGGCAG 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TACCAAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGGCAG 2072
Query 1599 CCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGTCTGAGGATGTTC 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGTCTGAGGATGTTC 2146
Query 1673 GACAGCGTCACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTTTGCAACCT 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GACAGCGTCACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTTTGCAACCT 2220
Query 1747 CCTGTGGTCTCTAAGGAAACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCAGCGCCAAAAGAA 1820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCTGTGGTCTCTAAGGAAACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCAGCGCCAAAAGAA 2294
Query 1821 GGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTACCCAGAAG 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTACCCAGAAG 2368
Query 1895 TCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCTCCTCTGATTCTGCTTTG 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCTCCTCTGATTCTGCTTTG 2442
Query 1969 GGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGGTTCCCATG---- 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGGTTCCCATGCAGG 2516
Query 2039 ---------------CAGACTTTCTGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGC 2097
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TCTCTGGTTCCCTTTCAGACTTTCTGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGC 2590
Query 2098 GTTGGGAGTCTGGAAGAAGACTCTCCCTTCCCTTCCTTTGCCCAGATGCTGAGGGTTGGAAAAGCAAAAGCAGA 2171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GTTGGGAGTCTGGAAGAAGACTCTCCCTTCCCTTCCTTTGCCCAGATGCTGAGGGTTGGAAAAGCAAAAGCAGA 2664
Query 2172 TGTGTGGCCCAAAACTGCTCCAAAGAAAGATGAGAACAGCTTAGTTCCTCCTGCCCCTGTGGACAGCGACGGGG 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TGTGTGGCCCAAAACTGCTCCAAAGAAAGATGAGAACAGCTTAGTTCCTCCTGCCCCTGTGGACAGCGACGGGG 2738
Query 2246 AGAGTGATAATTCAGACCGTGTTCCTGTGCCCAGTTTTCAAAATTCCTTCAGCCAAGCTATTGAAGCAGCCTTC 2319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AGAGTGATAATTCAGACCGTGTTCCTGTGCCCAGTTTTCAAAATTCCTTCAGCCAAGCTATTGAAGCAGCCTTC 2812
Query 2320 ATGAAACTGGACACACCAGCTACTTCAGATCCCCTCTCTGAAGAGAAAGGAGGAAAGAAAAGAAAAAAACAGAA 2393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 ATGAAACTGGACACACCAGCTACTTCAGATCCCCTCTCTGAAGAGAAAGGAGGAAAGAAAAGAAAAAAACAGAA 2886
Query 2394 ACAGAAGCTCCTGTTCAGCACCTCAGTCGTCCACACCAAG---------------------------------- 2433
||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 ACAGAAGCTCCTGTTCAGCACCTCAGTCGTCCACACCAAGTGACACTACTGGCCCAGGCTACCTTCTCCATCTG 2960
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 2961 GTTTTTGTTTTTGTTTTTTTTTCCCCCATGCTTTTGTTTGGCTGCTGTAATTTTTAAGTATTTGAGTTTGAACA 3034
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3035 GATTAGCTCTGGGGGGAGGGGGTTTCCACAATGTGAGGGGGAACCAAGAAAATTTTAAATACAGTGTATTTTCC 3108
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3109 AGCTTCCTGTCTTTACACCAAAATAAAGTATTGACACAAGAGATCTCTTCCTGCCAAGGTTTTTAGTTCATTGC 3182
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3183 CAGTTTAGTCTTTTTGACCCATGTGTAATTAATTTTTCTCAACCCAAAGTAAGATTGAGTCCCCTTTGAGATGC 3256
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3257 ATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAGTA 3330
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3331 CACCTCTCAGTTTGTCTTTTAAAAAACAGCTGAATCTTTACTACCTATTTAGTTCTCCTTGTTAAAGAAACAGG 3404
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3405 GGTGGGAATAAAATGGATTTAGGACACCCAGTTTGAATTGCAGTTTTTTTTTTTCTGACACATGGCCAGGCTGT 3478
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3479 GGTGCCAGCTTAATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGAGCA 3552
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3553 TGGCTTGAGTTGGTAAGGAAAGCTGTAACTCACGAAGCCCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTT 3626
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3627 CAGTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCCATCTGAAGCGGTAGC 3700
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3701 ATTGCCACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATGTGAATTCTT 3774
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3775 TTGCTGCTTAATAAAGTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTGCACAA 3848
Query 2434 - 2433
Sbjct 3849 G 3849