Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07540
Subject:
XM_011250653.1
Aligned Length:
1050
Identities:
703
Gaps:
252

Alignment

Query    1  ATGGTGGAGAAGGAGGAGGCTGGCGGC------------GGCATTAGCGAGGAGGAGGCGGCACAGTATGACCG  62
            |||||.|||||||||||||||||||||            |||||.||||||||||||||.||.|||||||||||
Sbjct    1  ATGGTAGAGAAGGAGGAGGCTGGCGGCGGCGGCGGCGGTGGCATCAGCGAGGAGGAGGCAGCGCAGTATGACCG  74

Query   63  GCAGATCCGCCTGTGGGGACTGGAGGCCCAGAAACGGCTGCGGGCCTCTCGGGTGCTTCTTGTCGGCTTGAAAG  136
            .||||||||||||||||||||||||||||||||.|||||.||.||.||.||||||||..||||.|||.||||||
Sbjct   75  ACAGATCCGCCTGTGGGGACTGGAGGCCCAGAAGCGGCTTCGAGCTTCCCGGGTGCTGATTGTTGGCATGAAAG  148

Query  137  GACTTGGGGCTGAAATTGCCAAGAATCTCATCTTGGCAGGAGTGAAAGGACTGACCATGCTGGATCACGAACAG  210
            |||||||.||||||||||||||||||||.|||.||||||||||.|||||.||.|||||||||||.|||||||||
Sbjct  149  GACTTGGAGCTGAAATTGCCAAGAATCTTATCCTGGCAGGAGTCAAAGGGCTCACCATGCTGGACCACGAACAG  222

Query  211  GTAACTCCAGAAGATCCCGGAGCTCAGTTCTTGATTCGTACTGGGTCTGTTGGCCGAAATAGGGCTGAAGCCTC  284
            |||.||||||||||.||.|||||||||||||||||||..|||||||||||.|||||.||||||||.||.|||||
Sbjct  223  GTATCTCCAGAAGACCCTGGAGCTCAGTTCTTGATTCAGACTGGGTCTGTGGGCCGCAATAGGGCCGAGGCCTC  296

Query  285  TTTGGAGCGAGCTCAGAATCTCAACCCCATGGTGGATGTGAAGGTGGACACTGAGGATATAGAGAAGAAACCAG  358
            ||||||.|||||.|||||||||||.||||||||||||||.||||||||||||||||||.||||||||||.||||
Sbjct  297  TTTGGAACGAGCCCAGAATCTCAATCCCATGGTGGATGTAAAGGTGGACACTGAGGATGTAGAGAAGAAGCCAG  370

Query  359  AGTCATTTTTCACTCAATTCGATGCTGTGTGTCTGACTTGCTGCTCCAGGGATGTCATAGTTAAAGTTGACCAG  432
            ||||.||.|||||..|.||.|||||.|||||.|||||||||||||||||.||||||||..|||||||.||||||
Sbjct  371  AGTCCTTCTTCACGAAGTTTGATGCGGTGTGCCTGACTTGCTGCTCCAGAGATGTCATCATTAAAGTCGACCAG  444

Query  433  ATCTGTCACAAAAATAGCATCAAGTTCTTTACAGGAGATGTTTTTGGCTACCATGGATACACATTTGCCAATCT  506
            ||||||||||.|||.|||||.||||||||.|||||||||||.|||||.||||||||.|||||.|||||.|||||
Sbjct  445  ATCTGTCACAGAAACAGCATTAAGTTCTTCACAGGAGATGTCTTTGGGTACCATGGGTACACCTTTGCGAATCT  518

Query  507  AGGAGAGCATGAGTTTGTAGAGGAGAAAACTAAAGTTGCCAAAGTTAGCCAAGGAGTAGAAGATGGGCCCGACA  580
            .|||||||||||.||||||||.||||||||.||||||||||||||.|||||||||||.||||||||.||.||..
Sbjct  519  TGGAGAGCATGAATTTGTAGAAGAGAAAACCAAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGGACCTGAGG  592

Query  581  CCAAGAGAGCAAAACTTGATTCTTCTGAGACAACGATGGTCAAAAAGAAGGTGGTCTTCTGCCCTGTTAAAGAA  654
            |||||||||||||.||||||||.||.||||||||.||||||||||||||.|||.|.||.||||||||.|||||.
Sbjct  593  CCAAGAGAGCAAAGCTTGATTCATCAGAGACAACCATGGTCAAAAAGAAAGTGCTTTTTTGCCCTGTAAAAGAG  666

Query  655  GCCCTGGAGGTGGACTGGAGCAGTGAGAAAGCAAAGGCTGCTCTGAAGCGCACGACCTCCGACTACTTTCTCCT  728
            ||.||.||.|||||||||||..|.||||||||.||||||||.||||||||.||..||.|||||||||||||.||
Sbjct  667  GCGCTAGAAGTGGACTGGAGTGGAGAGAAAGCCAAGGCTGCCCTGAAGCGTACTGCCCCCGACTACTTTCTGCT  740

Query  729  TCAAGTGCTCTTAAAGTTCCGTACAGATAAAGGAAGAGATCCCAGTTCTGATACATATGAGGAAGATTCTGAGT  802
            .||                                                                       
Sbjct  741  GCA-----------------------------------------------------------------------  743

Query  803  TGTTGCTCCAGATACGAAATGATGTGCTTGACTCACTGGGTATTAGTCCTGACCTGCTTCCTGAGGACTTTGTC  876
                                                                                      
Sbjct  744  --------------------------------------------------------------------------  743

Query  877  AGGTACTGCTTCTCCGAGATGGCCCCAGTGTGTGCGGTGGTTGGAGGGATTTTGGCACAGGAAATTGTGAAGGC  950
            ||||||||||||||.||||||||||||||.|||||.||||||||||||||.||||||||||||||||       
Sbjct  744  AGGTACTGCTTCTCTGAGATGGCCCCAGTATGTGCTGTGGTTGGAGGGATCTTGGCACAGGAAATTG-------  810

Query  951  CCTGTCTCAGCGGGACCCTCCTCACAACAACTTCTTCTTCTTCGATGGCATGAAGGGGAATGGGATTGTGGAGT  1024
                                                                                      
Sbjct  811  --------------------------------------------------------------------------  810

Query 1025  GCCTTGACCCCAAG  1038
                          
Sbjct  811  --------------  810

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