Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07561
- Subject:
- NR_028315.1
- Aligned Length:
- 2323
- Identities:
- 520
- Gaps:
- 1716
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGTGGGATCCGGCGGCGGCGGCGGCAGCGGCGGCGGCGACGGCGGCGGCGGCGGCTGCAGCTCGCGGCGCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTCCCCGCCCCCTCGCCTCCGCGCTTCCGCCGGCCCCTCACCCCGGCGCTGACAGACCGGCGCGCGTCGGCAG 148
Query 1 -----ATGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGG 69
|||||.|||||||||||||||||||||||||||||||||||||||||..|||||||||||||.||||||
Sbjct 149 CGAGCATGGGCGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGCCGAAGCCCGCCTCGGATGAGGGCTACTGG 222
Query 70 GACTGTAGCGTCTGCACCTTCCGGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGATGTGCGGAAGGGCAC 143
|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACTGCAGTGTCTGCACCTTCCGGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGATGTGCGGAAGGGCAC 296
Query 144 CTCCACCCGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTT 217
||||||||||||||||||.|.|||||.|||||.||.|||||.|||||||||||.|||||||..| |||..|.|
Sbjct 297 CTCCACCCGATCCACATTCTCTGAAGCTATTGCGAATGCCTTGAGGACCAAGGGACCGTTGTGA--TCCCCTCT 368
Query 218 CAGGAAGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG 291
||||||||||.||.||.||||||||||||.||||.|||||||||||.||.||||||||.|||||.|||||.|||
Sbjct 369 CAGGAAGGAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAG 442
Query 292 TCAAAGAAAGAGAAAAAAGATAAAGTAGAAAAAGAAAAAAGTGAAAAGGAAACAACTAGCAAAAAGAATAGCCA 365
||.|||||||||||.|||||...||||||.||.||.||.|||||.||||||.|..|||||||||||||..|.||
Sbjct 443 TCGAAGAAAGAGAAGAAAGACCGAGTAGAGAAGGACAAGAGTGAGAAGGAAGCTGCTAGCAAAAAGAACTGTCA 516
Query 366 TAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGGAGATC 439
.|||||||||||.||||||||.||||||||||||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 517 CAAGAAAACCAGACCAAGATTAAAAAATGTGGATCGGAGTAGCGCTCAGCATTTGGAAGTCACTGTTGGAGATC 590
Query 440 TGACAGTCATTATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCCTCTGCAGATCAA 513
|.|||||||||||.||||||||||||||||||.|.||||||.|||||||.||.||.|||| |||..|||||.
Sbjct 591 TAACAGTCATTATCACAGACTTTAAGGAGAAAGCCAAGTCAGCGCCTGCGTCCAGCGCTG---CTGGCGATCAG 661
Query 514 CACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGGTCATCTTCACCCAGAGGAGAAGC 587
|||||.||..||.|||..|||||.||.|.|||.|||.|.||..||||||||||.||.||.||..|.||||||||
Sbjct 662 CACAGCCAGGGCAGCTGCAGCTCGGACAGCACTGAGCGGGGTGTGTCCAGGTCCTCCTCGCCGCGGGGAGAAGC 735
Query 588 CTCATCATTGAATGGAGAATCTCAT------------------------------------------------- 612
|||.||..|.||.|||||.|||||.
Sbjct 736 CTCCTCCCTCAACGGAGAGTCTCACTAACCGTTCTTGCTCCACTTAGTCATGCCTGTCCTCCATGGAGATGCAG 809
Query 613 -------------------------------------------------------------------------- 612
Sbjct 810 AGTATGCCAACAACTACCACATTTTCATGACAGACACACTCATGCATAACCTATAATTTGAGTTTTACACGAAA 883
Query 613 -------------------------------------------------------------------------- 612
Sbjct 884 TACGAATTTGCCAGGATTTATTAGATTTTATTGCAGTGTAAGCTACCAAACATTTCCAGAGTTAACATTTTGGT 957
Query 613 -------------------------------------------------------------------------- 612
Sbjct 958 CTCTGCTGTTAAATGCCATGAAAATGTGGTTGAATTATTCATTATGCAGTGTTATTGGTAAGTCTATTTTCACT 1031
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1032 TATAGTTTAGTGAATTCTAACACATAATTATTGAATTCTCTACTATTGGCATGTAATGAGTTTAAATTTTTTAT 1105
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1106 TACATAGTGCAAGCTGCCTAAATATGTATTATTTGAGAATTGTGAAACAAATAGTTATATGTATGCAAGTCAGA 1179
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1180 GATCAACTTAATCAACTATTGCTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTG 1253
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1254 GTGTGATTAAATAGGAAGTTGTTATTAAATAAAGAATTTGTATGAATCTTTGCCAATGTTTTTTGACATGTTTT 1327
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1328 TACTAAATTATTGTTTCTGAGTTATGTTTTATCCATTTTTTGCAGTTTATGTTTGTTAGTTTGCTTATTTTTCA 1401
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1402 AAGCATCAATTTATTGTACTGTTCACTAGTAGACAGTACGACGTGGCTTGTTTAGCTTTCTGATCAGGGTTAGC 1475
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1476 GCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAGACATTAGAGTTAAAGAAGCAAGCATCTGGCAGA 1549
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1550 AGCAGGAAAGAACTTGCCATACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCCCTGTTCCAAC 1623
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1624 CCTACCCAGGGTCACAGACATGTGACTCTAGTTGATATAAACATGTAACTATTACACAGAACTGAGGTGTCACT 1697
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1698 CCTAAGTCAGCTTAATTGGCCTTTTACTAAATAAAACAATTCATATGGAAACCACAGTACTCTAGTTCCAGATA 1771
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1772 CAACCTTCAATTTATGCACTTATCAATATCTTGAAATAAAAAGTATTTACGGCCCCACTCACTTATGTATAATC 1845
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1846 ACCAATAAAATATTTTTTATGACTTACAGTTTTGCATTTTGTTTACAACTAAATGGAGTGTGTTATGTTGTATT 1919
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1920 TGAAAATACATCTTAGAAACTACATGCTCTATCTTATTCTCCTCAGGTTCTCTTGTTTTTGCTAGCCATTTGCT 1993
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1994 TAATATATATCTGCCTATGGGGGTGGGGGGAGCTTCTGAAATGTAAATTAACCTAAAGATAAAACGTACCTTGA 2067
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2068 ATATCATCTACCACATAAAAGACATCATGGCAACATTTGAAGGAAAATCTGTGGTCCCTGACAGTTGTGATACT 2141
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2142 TGGTTTCTCATGGTAATGTCACTGTTGAAATGCAGTTCGTTTCATTGGCACAGTGGTACTCTTGTAACGTGCTA 2215
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2216 GTTGTGAATAGTTTATTGCATACAGTAAAAATCTGTGATGAAAACGCTCAGATACCTCATTCTTCAGTGTTGTT 2289
Query 613 ----------------------------- 612
Sbjct 2290 AAATGAAGGCTTAAAACTTGTTTTATTCT 2318
