Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07592
- Subject:
- XR_001736911.2
- Aligned Length:
- 2415
- Identities:
- 1247
- Gaps:
- 1167
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATTTCAAACTCTCCCCTCCCCCTCGCTCCCTCCAGCCACCAAAGTATCTGAACCCAGAACTCACAACAGGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGTACTCAACAGGAACGTGTACTCAATTAGCTTTTGTGGGAAAGGGTTGAAGATTCTTGGTAACTGCTTCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACCAGAGGAATTAATTAGACCGCTGATTTTCTCCGGAAGCGCGAAGCACTAGGCCGTTTGAGGATCTCCGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCTTTGCCTGGGACCAGGAAAAGACGCGAGAGACGGAACTCGGCATCAGGCACTGCTTGGGGCAGGAGGAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTAGGGGAAACCAAGGAAGAGAACAGAAAGGTAAGCACCAGCCACAAAAACCTACAAAAGAAGGGAAATTACTG 370
Query 1 -----------------------------ATGAGTGGGCATCGATCAACAAGGAAAAGATGTGGAGATTCTCAC 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTTTAAATATTAAAAAAAAACAAGATCCATGAGTGGGCATCGATCAACAAGGAAAAGATGTGGAGATTCTCAC 444
Query 46 CCGGAGTCCCCAGTGGGCTTCGGGCATATGAGTACTACAGGATGTGTATTAAATAAATTGTTTCAGTTACCAAC 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCGGAGTCCCCAGTGGGCTTCGGGCATATGAGTACTACAGGATGTGTATTAAATAAATTGTTTCAGTTACCAAC 518
Query 120 ACCACCATTGTCAAGACACCAACTAAAGCGGCTAGAAGAACACAGATATCAAAGTGCTGGACGGTCCCTGCTTG 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCACCATTGTCAAGACACCAACTAAAGCGGCTAGAAGAACACAGATATCAAAGTGCTGGACGGTCCCTGCTTG 592
Query 194 AGCCCTTAATGCAAGGGTATTGGGAATGGCTCGTTAGAAGAGTTCCCTCCTGGATTGCCCCAAATCTCATCACC 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCCCTTAATGCAAGGGTATTGGGAATGGCTCGTTAGAAGAGTTCCCTCCTGGATTGCCCCAAATCTCATCACC 666
Query 268 ATCATTGGACTGTCAATAAACATCTGTACAACTATTTTATTAGTCTTCTACTGCCCTACAGCTACAGAGCAGGC 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATCATTGGACTGTCAATAAACATCTGTACAACTATTTTATTAGTCTTCTACTGCCCTACAGCTACAGAGCAGGC 740
Query 342 ACCTCTGTGGGCATATATTGCTTGTGCCTGTGGCCTTTTCATTTACCAGTCTTTGGATGCTATTGATGGGAAAC 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCTCTGTGGGCATATATTGCTTGTGCCTGTGGCCTTTTCATTTACCAGTCTTTGGATGCTATTGATGGGAAAC 814
Query 416 AGGCAAGAAGAACCAATAGTAGTTCTCCTCTGGGAGAACTTTTTGATCATGGCTGTGATTCACTATCAACAGTT 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGCAAGAAGAACCAATAGTAGTTCTCCTCTGGGAGAACTTTTTGATCATGGCTGTGATTCACTATCAACAGTT 888
Query 490 TTTGTGGTTCTCGGAACTTGTATTGCAGTGCAGCTGGGGACAAACCCTGATTGGATGTTTTTTTGTTGTTTTGC 563
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTGTGGTTCTTGGAACTTGTATTGCAGTGCAGCTGGGGACAAACCCTGATTGGATGTTTTTTTGTTGTTTTGC 962
Query 564 GGGGACATTTATGTTCTATTGTGCGCACTGGCAAACGTATGTTTCTGGAACATTGCGATTTGGAAT-------- 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGGACATTTATGTTCTATTGTGCGCACTGGCAAACGTATGTTTCTGGAACATTGCGATTTGGAATATTCGATG 1036
Query 630 -------------------------------------------------------------------------- 629
Sbjct 1037 TTACAGAGTCCCAGATCATAATTATAATATGCCAGCTTCTCACAGGAACCCTGGGGCCTTGGTTCTGGAACTTC 1110
Query 630 ---AATTGATGTGACTGAAGTGCAAATCTTCATAATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTT 700
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACGAATTGATGTGACTGAAGTGCAAATCTTCATAATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTT 1184
Query 701 TTTGGCAATCTATGATTCCAGTGCTGAATATTCAAATGAAAATTTTTCCTGCACTTTGTACTGTAGCAGGGACC 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTTGGCAATCTATGATTCCAGTGCTGAATATTCAAATGAAAATTTTTCCTGCACTTTGTACTGTAGCAGGGACC 1258
Query 775 ATATTTTCCTGTACAAATTACTTCCGTGTAATCTTCACAGGTGGTGTTGGCAAAAATGGATCAACAATAGCAGG 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATATTTTCCTGTACAAATTACTTCCGTGTAATCTTCACAGGTGGTGTTGGCAAAAATGGATCAACAATAGCAGG 1332
Query 849 AACAAGTGTCCTTTCTCCTTTTCTCCATATTGGATCAGTGATTACATTAGCTGCAATGATCTACAAGAAATCTG 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AACAAGTGTCCTTTCTCCTTTTCTCCATATTGGATCAGTGATTACATTAGCTGCAATGATCTACAAGAAATCTG 1406
Query 923 CAGTTCAGCTTTTTGAAAAGCATCCCTGTCTTTATATACTGACATTTGGTTTTGTGTCTGCTAAAATCACTAAT 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CAGTTCAGCTTTTTGAAAAGCATCCCTGTCTTTATATACTGACATTTGGTTTTGTGTCTGCTAAAATCACTAAT 1480
Query 997 AAGCTTGTGGTTGCACACATGACGAAAAGTGAAATGCATTTGCATGACACAGCATTCATAGGTCCGGCACTTTT 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAGCTTGTGGTTGCACACATGACGAAAAGTGAAATGCATTTGCATGACACAGCATTCATAGGTCCGGCACTTTT 1554
Query 1071 GTTTCTGGACCAGTATTTTAACAGCTTTATTGATGAATATATTGTACTTTGGATTGCCCTGGTTTTCTCTTTCT 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTTTCTGGACCAGTATTTTAACAGCTTTATTGATGAATATATTGTACTTTGGATTGCCCTGGTTTTCTCTTTCT 1628
Query 1145 TTGATTTGATCCGCTACTGTGTCAGTGTTTGCAATCAGATTGCGTCTCACCTGCACATACATGTCTTCAGAATC 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTGATTTGATCCGCTACTGTGTCAGTGTTTGCAATCAGATTGCGTCTCACCTGCACATACATGTCTTCAGAATC 1702
Query 1219 AAGGTCTCTACAGCTCATTCTAATCATCAT-------------------------------------------- 1248
||||||||||||||||||||||||||||||
Sbjct 1703 AAGGTCTCTACAGCTCATTCTAATCATCATTAATGATGTAATTGGTATATAGGAACATCATGTTTTCTGCAGGA 1776
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1777 AAGAAAGTAACATATTAAGGAGAATGGGGGTGGATAAGAACAAATATAATTTATAATAATCAATGTTGTATAAC 1850
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1851 TTTTATTCTTTATTATTGGTAACACGCCCTAACTATCCTGTGTGAGAATGGGAATTTCAAGTCCCATCTTGTAA 1924
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1925 ATTGTATATGTTGTCATGCAGGGTTTGGGCCAAGAAAGCATGCAGAAAAAAATGCCATGTGATTGTAATTATCC 1998
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1999 TGGATTCAGAATAATACTGTGATGGGGAGCCAGATCCGCAGTGGTGGAGAGTTCTAATGTTGACTGTTTGCAGG 2072
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 2073 CCAAAAGATGATTGCTTTATAATTTTAACAAATCATTGTCTTTTAGTAACATCCTTGTTTAGTGTCTTCTCAAG 2146
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 2147 CTTTCTTTACTGAGGAATTCAGCTTGTGACACAGATACATCCCACTAGCTTGTGAGGTGGAACTAGTAATAAAG 2220
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 2221 ACCTTGAATTTGGATTGAAAAGTTTCCTATCTTTACATTGTTGAGGAAGTCCTTTTTTTTTTTTTTTTTTTTTT 2294
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 2295 AATTGCTCAAGAAATGATTCTCTCACAGGCTTGGGAAATCCTGTTAGCATGCAGAATAATGTGGTAACTTTGTC 2368
Query 1249 ----------------------------------------------- 1248
Sbjct 2369 AATTTCCCATTTTATTTTTTTAAATAAATATATGATCTAAAAGCCAA 2415
