Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07608
- Subject:
- NM_001038612.1
- Aligned Length:
- 1493
- Identities:
- 336
- Gaps:
- 1126
Alignment
Query 1 ---------------------------------------------------------------ATG--CCAG-- 7
||| ||||
Sbjct 1 ATGTCGGTGCCGCTGCTGAAGATCGGGGTCGTGCTAAGCACCATGGCCATGATCACCAACTGGATGTCCCAGAC 74
Query 8 ------GTCGTTGGAGGTGGCAGCGAGACATGCACCCGGC----------------CCGGAAGCT---CCTCAG 56
.|||.|||.| |||..|.|.|| |||||||| |.|||.||| ||.|||
Sbjct 75 GCTGCCCTCGCTGGTG--GGCCTCAATAC---CACCCGGCTTTCGGCCGCCAGCGGCGGGACGCTGGACCGCAG 143
Query 57 CCTCCTCTTCCTCATCCTGATGGGCACTGAACTCACTCAAGTGCTGCCCACCAACCCTGAGGAGAGCTGGCAGG 130
| |..||| |||.|||||||||||||.||||||||||||||||
Sbjct 144 C------------------ACCGGC---------------GTGTTGCCCACCAACCCCGAGGAGAGCTGGCAGG 184
Query 131 TGTACAGCTCTGCCCAGGACAGCGAGGGCAGGTGTATCTGCACAGTGGTCGCCCCACAGCAGACCATGTGTTCA 204
||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct 185 TGTACAGCTCTGCCCAGGACAGTGAGGGCAGGTGTATCTGCACAGTGGTCGCCCCCCAGCAGACCATGTGTTCG 258
Query 205 CGGGATGCCCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGTGCAGAACATGTCTCAATCCATAGAGGTCTT 278
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||
Sbjct 259 CGGGATGCCCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGTGCAAAACATGTCTCAATCCATAGAAGTCTT 332
Query 279 GGACAGGCGGACCCAGAGAGACTTGCAGTACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTCCAAGT 352
|||||||||.||.|||||||||.||||||||||||||||||||||||||||.||||||||.||||||.||||||
Sbjct 333 GGACAGGCGAACTCAGAGAGACCTGCAGTACGTGGAGAAGATGGAGAACCAGATGAAAGGCCTGGAGACCAAGT 406
Query 353 TCAAACAGGTGGAGGAGAGTCATAAGCAACACCTGGCCAGGCAGTTTAAGGCGATAAAAGCGAAAATGGATGAA 426
||||.||||||||||||||.||||||||.||.||.|||||||||||.|||| ||
Sbjct 407 TCAAGCAGGTGGAGGAGAGCCATAAGCAGCATCTAGCCAGGCAGTTCAAGG--------GC------------- 459
Query 427 CTTAGGCCTTTGATACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGT 500
Sbjct 460 -------------------------------------------------------------------------- 459
Query 501 CCAGAATCTGACGTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGCCTATGACTACGATGAACTTCAGAGCA 574
Sbjct 460 -------------------------------------------------------------------------- 459
Query 575 GAGTGTCCAATCTTGAAGAAAGGCTCCGTGCATGCATGCAAAAACTAGCTTGCGGGAAGTTGACGGGCATCAGT 648
Sbjct 460 -------------------------------------------------------------------------- 459
Query 649 GACCCCGTGACTGTCAAGACCTCCGGCTCGAGGTTCGGATCCTGGATGACAGACCCTCTCGCCCCTGAAGGCGA 722
Sbjct 460 -------------------------------------------------------------------------- 459
Query 723 TAACCGGGTGTGGTACATGGACGGCTATCACAACAACCGCTTCGTACGTGAGTACAAGTCCATGGTTGACTTCA 796
Sbjct 460 -------------------------------------------------------------------------- 459
Query 797 TGAACACGGACAATTTCACCTCCCACCGTCTCCCCCACCCCTGGTCGGGCACGGGGCAGGTGGTCTACAACGGT 870
Sbjct 460 -------------------------------------------------------------------------- 459
Query 871 TCTATCTACTTCAACAAGTTCCAGAGCCACATCATCATCAGGTTTGACCTGAAGACAGAGACCATCCTCAAGAC 944
Sbjct 460 -------------------------------------------------------------------------- 459
Query 945 CCGCAGCCTGGACTATGCCGGTTACAACAACATGTACCACTACGCCTGGGGTGGCCACTCGGACATCGACCTCA 1018
Sbjct 460 -------------------------------------------------------------------------- 459
Query 1019 TGGTGGACGAGAGCGGGCTGTGGGCCGTGTACGCCACCAACCAGAACGCTGGCAACATCGTGGTCAGTAGGCTG 1092
Sbjct 460 -------------------------------------------------------------------------- 459
Query 1093 GACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAGCTACCCCAAGCGCAGCGCCGGGGAGGCCTTCAT 1166
Sbjct 460 -------------------------------------------------------------------------- 459
Query 1167 CATCTGCGGCACGCTGTACGTCACCAACGGCTACTCAGGGGGTACCAAGGTCCACTATGCATACCAGACCAATG 1240
Sbjct 460 -------------------------------------------------------------------------- 459
Query 1241 CCTCCACCTATGAATACATCGACATCCCATTCCAGAACAAATACTCCCACATCTCCATGCTGGACTACAACCCC 1314
Sbjct 460 -------------------------------------------------------------------------- 459
Query 1315 AAGGACCGGGCCCTGTATGCCTGGAACAACGGCCACCAGATCCTCTACAACGTGACCCTCTTCCACGTCATCCG 1388
Sbjct 460 -------------------------------------------------------------------------- 459
Query 1389 CTCCGACGAGTTG 1401
Sbjct 460 ------------- 459
