Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07652
- Subject:
- NR_148671.2
- Aligned Length:
- 2397
- Identities:
- 1271
- Gaps:
- 1125
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTTCCGGAACCTCCGGGTGTCATCCGCGGGGAAAGGTGGGGAAGGGTCCCGGGAACGTGGTGGGGCAGGGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGAGCGTGGTTGGACTTTGAAGGGGATCGGCCGCCGTGAGTGTGGGGCCTGCAGCCTACTCTCCCCGAGTCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCCGGCCTGCCTCGCTCGAGGCACCCGACGGCTTCTGTCTCCGCGGGCTGGCGCCTGACCAGCCAGGCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGTTCCCCGCCTACTGCATTTGAAAGATCCCGAAAACCCTGGATGATTGTGCCTGGGGTTGGCAAGTTCGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTGAGTGCCTTCAAGAAGGGTTCCTCAAGCAGTTGTCGATAGAGCCCTCCCTACTGTATACGCCCCCTCCGCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTCCTGCTACTTCCTTTCTCCTCCTCGTATTTCCCCCTCGGTCCTTTACGCCGCCTTTCCCCCTCATTTGCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCTGCATCCCCTTTTTGGAATTGCTCAACCAGGTGGTAACCGGCGCCGCTTCCTGGCCTTGGGAGGTGGTTC 518
Query 1 --------------------------------------------ATGTCTGACCACGGAGATGTGAGCCTCCCG 30
|||||||||||.||||||||||||||||||
Sbjct 519 CTTTCTTAACCCACAAGAACCTCTCCCAAGAGAACTTGGTCCTGATGTCTGACCATGGAGATGTGAGCCTCCCG 592
Query 31 CCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTGCGGTAGAGGTGAATGAAGACATTCCACCCCGTCG 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTGCGGTAGAGGTGAATGAAGACATTCCACCCCGTCG 666
Query 105 GTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCATCCATTTACTCTGAGGAAGGCAACATTGAACATGCCT 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCATCCATTTACTCTGAGGAAGGCAACATTGAACATGCCT 740
Query 179 TCATCCTCTATAACAAGTATATCACGCTCTTTATTGAGAAACTACCAAAACATCGAGATTACAAATCTGCTGTC 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCATCCTCTATAACAAGTATATCACGCTCTTTATTGAGAAACTACCAAAACATCGAGATTACAAATCTGCTGTC 814
Query 253 ATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAGGCAGA 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAGGCAGA 888
Query 327 GCTGTTAAAACGATATACCAAAGAATATACAGAATATAATGAAGAAAAGAAGAAGGAAGCAGAGGAATTGGCCC 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCTGTTAAAACGATATACCAAAGAATATACAGAATATAATGAAGAAAAGAAGAAGGAAGCAGAGGAATTGGCCC 962
Query 401 GGAACATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGGGTAGCACAACAGAAGCAGCAGCAATTGGAA 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAACATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGGGTAGCACAACAGAAGCAGCAGCAATTGGAA 1036
Query 475 CAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTGTACA 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTGTACA 1110
Query 549 GGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGT 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGT 1184
Query 623 TCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCACCTGTG 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCACCTGTG 1258
Query 697 GTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAGTATTCCCACAATCGATGGATTGCGCCATGT 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAGTATTCCCACAATCGATGGATTGCGCCATGT 1332
Query 771 GGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACACTGCCCGGGGAGTGGAGACAT 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACACTGCCCGGGGAGTGGAGACAT 1406
Query 845 GTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAAGCAAAGTGCT 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAAGCAAAGTGCT 1480
Query 919 GGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACAGGATCAGCAGGGCCTCATCACACT 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACAGGATCAGCAGGGCCTCATCACACT 1554
Query 993 GGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCAGTGTCGACCTACACACTCACTGCTCTTACC 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCAGTGTCGACCTACACACTCACTGCTCTTACC 1628
Query 1067 AGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAGTTCCAGGAAACTGGATTCTTTAAACTAACT 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAGTTCCAGGAAACTGGATTCTTTAAACTAACT 1702
Query 1141 GACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTCTGTT 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTCTGTT 1776
Query 1215 CTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCATCACAGACCTTCGA---------------- 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCATCACAGACCTTCGATGAGCGTTTGAGTCCA 1850
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1851 ACACCTTCCAAGAACAACAAAACCATATCAGTAAACCGAAACTTCATTGCCCCTTCAATGTGGGAATCCAGCCA 1924
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1925 GACCCTATTCTTGGACAGCATCAGTGAAAGGGGCTTGGGAAAGCTCTTGGGCGTAGCAGCAGAGGCATGTCATA 1998
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1999 TATGGAAACCTTCCATGAGGGTGACCTCACCACTGGAACCCGTTCAACATAAACCTTGCTGCAAGAACTAGCAG 2072
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2073 AGCTCTTTGGACAAAACGTGCTCACCAAGATGGAGGAACAGAGCCCATGGCCCACTTACTACATGGATTCCCAC 2146
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2147 TTTACAGTGGAGAAGGAGCTTGCAGTAACCACAAAAGTTTCTGTATAAGCAAATTTAGGGAATTGAACTTCAGA 2220
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2221 CAGTGTGGTTGTCTCCTTACTTATGAACTTGGGAATACTTACTTAGGTAACAACTAACATCAGAGGTTTTTGAT 2294
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2295 CTGTAGCCTTTCTTTCTGTCCATAATTAGCTAATAGCTTCTGCTGTACAAACACAAACCATTCCCTGTCCAAGA 2368
Query 1273 ----------------------------- 1272
Sbjct 2369 AAATTAAACTATATCATCAGAATAAGAAA 2397
