Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07654
Subject:
NR_104209.2
Aligned Length:
2218
Identities:
942
Gaps:
1274

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAGAAGGCCCCTCGGCCTCAGCAGAGCGCTATCCTCCACTGGTTCCCCGGGTTCCCCGGCTTGCTACCGGGCT  74

Query    1  -------------------------------------------ATGGCGGAGGTGAAGGTGAAGGTGCAGCCGC  31
                                                       |||||||||||||||||||||||||||||||
Sbjct   75  GCTCCGTGCATCTTTCCCCCCAGGCGTCAGGAACTGCGCCCTCATGGCGGAGGTGAAGGTGAAGGTGCAGCCGC  148

Query   32  CTGACGCGGATCCGGTCGAAATAGAAAACAGGATTATAGAATTATGTCACCAGTTCCCTCATGGAATCACAGAC  105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGACGCGGATCCGGTCGAAATAGAAAACAGGATTATAGAATTATGTCACCAGTTCCCTCATGGAATCACAGAC  222

Query  106  CAAGTAATTCAGAATGAAATGCCTCATATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTAT  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAAGTAATTCAGAATGAAATGCCTCATATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTAT  296

Query  180  --------------------------------------------------------------GGGTCAGTTGGA  191
                                                                          ||||||||||||
Sbjct  297  GATGACTAACGCATTAGGACTCAACTCTGCCATTGTCTCCAGGAAGTCACTGAACCCCCCCAGGGTCAGTTGGA  370

Query  192  TCTCTTAAGGAGCAATACGGGCCTTTTATATAGAATAAAGGACTCTCAGAATGCTGGTAAAATGAAGGGATCCG  265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTCTTAAGGAGCAATACGGGCCTTTTATATAGAATAAAGGACTCTCAGAATGCTGGTAAAATGAAGGGATCCG  444

Query  266  ATAACCAAGAAAAACTAGTATATCAAATCATAGAGGATGCAGGAAATAAAGGAATATGGAGCAGAGATATCCGC  339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATAACCAAGAAAAACTAGTATATCAAATCATAGAGGATGCAGGAAATAAAGGAATATGGAGCAGAGATATCCGC  518

Query  340  TATAAAAGTAATTTGCCATTAACAGAAATCAACAAAATTCTGAAGAATCTGGAAAGTAAAAAGCTTATCAAAGC  413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TATAAAAGTAATTTGCCATTAACAGAAATCAACAAAATTCTGAAGAATCTGGAAAGTAAAAAGCTTATCAAAGC  592

Query  414  TGTTAAGTCTGTAGCAGCCTCAAAAAAGAAGGTGTATATGCTCTATAACCTGCAGCCAGACCGGTCTGTGACTG  487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGTTAAGTCTGTAGCAGCCTCAAAAAAGAAGGTGTATATGCTCTATAACCTGCAGCCAGACCGGTCTGTGACTG  666

Query  488  GTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCAACAGTGTTTTAAATTC  561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCAACAGTGTTTTAAATTC  740

Query  562  CTACAGTCCAAGGCAGAAACAGCACGAGAAAGCAAACAGAACCCAATGATACAAAGAAATAGTTCATTTGCCTC  635
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTACAGTCCAAGGCAGAAACAGCACGAGAAAGCAAACAGAACCCAATGATACAAAGAAATAGTTCATTTGCCTC  814

Query  636  ATCACATGAAGTGTGGAAATATATCTGCGAATTGGGAATCAGTAAGGTAGAGTTATCCATGGAAGACATTGAAA  709
            ||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||
Sbjct  815  ATCACATGAAGTGTGGAAATATATCTGCGAATTGGGAATCAGTA----AGAGTTATCCATGGAAGACATTGAAA  884

Query  710  CCATCCTGAATACACTCATTTATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAAGGCACAGTTGGC  783
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  CCATCCTGAATACACTCATTTATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAAGGCACAGTTGGC  958

Query  784  AGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACGGGTTTGGTCCGGGCACC  857
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  959  AGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACC  1032

Query  858  CTGTGGACTCTGCCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGA  931
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  CTGTGGACTCTGCCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGA  1106

Query  932  CAGAGTGGCACGAATTT---------------------------------------------------------  948
            |||||||||.|||||||                                                         
Sbjct 1107  CAGAGTGGCTCGAATTTTAATAGAGAGCTATGAACTTTATTGACATTTTGCAAATGAAGTTACTTAGGGAGCAG  1180

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1181  ATAATTTAATTCATGATGGAACACGAAATCTCCTTGAAAGCAAACTTCACAATAATGGACGTAGACTTGCTGCT  1254

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1255  ATGAAAACATATTTTTTTTATTTATGAAGACTAAATTTATATTGGTAAAATAGCCAGTAGAATATGAAAGAAAT  1328

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1329  AAGGTTAGTAGTGAAATTCATTCTTCAATAAATAAAACACTTTGAAACTCCGGAGGACCACATCTTTCAAGACT  1402

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1403  TCTGATGGGTCAAGGAAAAAGATGCCAACATACCCGTATTTACCAAGTACTATGATAATGGCTAGAGTATAAAA  1476

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1477  ATGTTCTTTTTAAAGTTATTTATTAAGTTCTTCATTGGAAGTTTTTTTTTATATCTGGTTCACTACCACCATTT  1550

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1551  TCTGTTTCCTACTTTCTCAGTGGTTTCATTGAAAAGAAATTAGAAGGGGTTAAAGGCAGGAATAGCAAAGAGTG  1624

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1625  CAAACTTGGGGTATGACTGGGGGAGAGTGGAACATGCCTTTTCCGCACAATATTAATTCCTTTTTGTATCAGAA  1698

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1699  ATGTTCTTTTAGGAGATTATGCTACCATACTTACTTCAAACCCAATGACTACTGTCAAGGACATATTTTCAGTA  1772

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1773  CATAAATACTATCATTTTCATTCTAAAGAATATTTTCACTGTTCCTTCTTTCTTAAAGTCTTATGTTTCACTCT  1846

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1847  TTAACTCAAATGTATTCTTTGTTAGAATTTACCCTAGATTCTTATTTAATGTCTGCAGTAGACTGAATGTTTGT  1920

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1921  GTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAATGTGATGGTATTTGGAGGTGGGGCTTTTGGTAAGTG  1994

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1995  ATAGGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAGAGCTCCATCA  2068

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2069  CCCCTTCTGCCATGTGAAAGGGAGAAGACAAACATCCACGAACCAGGAAGTGGGTCCTCACCAGAAAACAAATC  2142

Query  949  ------------------------------------------------------------------------  948
                                                                                    
Sbjct 2143  TGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGTTGTTGATAAACCA  2214

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