Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07654
- Subject:
- NR_104209.2
- Aligned Length:
- 2218
- Identities:
- 942
- Gaps:
- 1274
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGAAGGCCCCTCGGCCTCAGCAGAGCGCTATCCTCCACTGGTTCCCCGGGTTCCCCGGCTTGCTACCGGGCT 74
Query 1 -------------------------------------------ATGGCGGAGGTGAAGGTGAAGGTGCAGCCGC 31
|||||||||||||||||||||||||||||||
Sbjct 75 GCTCCGTGCATCTTTCCCCCCAGGCGTCAGGAACTGCGCCCTCATGGCGGAGGTGAAGGTGAAGGTGCAGCCGC 148
Query 32 CTGACGCGGATCCGGTCGAAATAGAAAACAGGATTATAGAATTATGTCACCAGTTCCCTCATGGAATCACAGAC 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGACGCGGATCCGGTCGAAATAGAAAACAGGATTATAGAATTATGTCACCAGTTCCCTCATGGAATCACAGAC 222
Query 106 CAAGTAATTCAGAATGAAATGCCTCATATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTAT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAAGTAATTCAGAATGAAATGCCTCATATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTAT 296
Query 180 --------------------------------------------------------------GGGTCAGTTGGA 191
||||||||||||
Sbjct 297 GATGACTAACGCATTAGGACTCAACTCTGCCATTGTCTCCAGGAAGTCACTGAACCCCCCCAGGGTCAGTTGGA 370
Query 192 TCTCTTAAGGAGCAATACGGGCCTTTTATATAGAATAAAGGACTCTCAGAATGCTGGTAAAATGAAGGGATCCG 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTCTTAAGGAGCAATACGGGCCTTTTATATAGAATAAAGGACTCTCAGAATGCTGGTAAAATGAAGGGATCCG 444
Query 266 ATAACCAAGAAAAACTAGTATATCAAATCATAGAGGATGCAGGAAATAAAGGAATATGGAGCAGAGATATCCGC 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATAACCAAGAAAAACTAGTATATCAAATCATAGAGGATGCAGGAAATAAAGGAATATGGAGCAGAGATATCCGC 518
Query 340 TATAAAAGTAATTTGCCATTAACAGAAATCAACAAAATTCTGAAGAATCTGGAAAGTAAAAAGCTTATCAAAGC 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATAAAAGTAATTTGCCATTAACAGAAATCAACAAAATTCTGAAGAATCTGGAAAGTAAAAAGCTTATCAAAGC 592
Query 414 TGTTAAGTCTGTAGCAGCCTCAAAAAAGAAGGTGTATATGCTCTATAACCTGCAGCCAGACCGGTCTGTGACTG 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGTTAAGTCTGTAGCAGCCTCAAAAAAGAAGGTGTATATGCTCTATAACCTGCAGCCAGACCGGTCTGTGACTG 666
Query 488 GTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCAACAGTGTTTTAAATTC 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCAACAGTGTTTTAAATTC 740
Query 562 CTACAGTCCAAGGCAGAAACAGCACGAGAAAGCAAACAGAACCCAATGATACAAAGAAATAGTTCATTTGCCTC 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTACAGTCCAAGGCAGAAACAGCACGAGAAAGCAAACAGAACCCAATGATACAAAGAAATAGTTCATTTGCCTC 814
Query 636 ATCACATGAAGTGTGGAAATATATCTGCGAATTGGGAATCAGTAAGGTAGAGTTATCCATGGAAGACATTGAAA 709
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 815 ATCACATGAAGTGTGGAAATATATCTGCGAATTGGGAATCAGTA----AGAGTTATCCATGGAAGACATTGAAA 884
Query 710 CCATCCTGAATACACTCATTTATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAAGGCACAGTTGGC 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 CCATCCTGAATACACTCATTTATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAAGGCACAGTTGGC 958
Query 784 AGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACGGGTTTGGTCCGGGCACC 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 959 AGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACC 1032
Query 858 CTGTGGACTCTGCCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGA 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 CTGTGGACTCTGCCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGA 1106
Query 932 CAGAGTGGCACGAATTT--------------------------------------------------------- 948
|||||||||.|||||||
Sbjct 1107 CAGAGTGGCTCGAATTTTAATAGAGAGCTATGAACTTTATTGACATTTTGCAAATGAAGTTACTTAGGGAGCAG 1180
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1181 ATAATTTAATTCATGATGGAACACGAAATCTCCTTGAAAGCAAACTTCACAATAATGGACGTAGACTTGCTGCT 1254
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1255 ATGAAAACATATTTTTTTTATTTATGAAGACTAAATTTATATTGGTAAAATAGCCAGTAGAATATGAAAGAAAT 1328
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1329 AAGGTTAGTAGTGAAATTCATTCTTCAATAAATAAAACACTTTGAAACTCCGGAGGACCACATCTTTCAAGACT 1402
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1403 TCTGATGGGTCAAGGAAAAAGATGCCAACATACCCGTATTTACCAAGTACTATGATAATGGCTAGAGTATAAAA 1476
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1477 ATGTTCTTTTTAAAGTTATTTATTAAGTTCTTCATTGGAAGTTTTTTTTTATATCTGGTTCACTACCACCATTT 1550
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1551 TCTGTTTCCTACTTTCTCAGTGGTTTCATTGAAAAGAAATTAGAAGGGGTTAAAGGCAGGAATAGCAAAGAGTG 1624
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1625 CAAACTTGGGGTATGACTGGGGGAGAGTGGAACATGCCTTTTCCGCACAATATTAATTCCTTTTTGTATCAGAA 1698
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1699 ATGTTCTTTTAGGAGATTATGCTACCATACTTACTTCAAACCCAATGACTACTGTCAAGGACATATTTTCAGTA 1772
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1773 CATAAATACTATCATTTTCATTCTAAAGAATATTTTCACTGTTCCTTCTTTCTTAAAGTCTTATGTTTCACTCT 1846
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1847 TTAACTCAAATGTATTCTTTGTTAGAATTTACCCTAGATTCTTATTTAATGTCTGCAGTAGACTGAATGTTTGT 1920
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1921 GTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAATGTGATGGTATTTGGAGGTGGGGCTTTTGGTAAGTG 1994
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1995 ATAGGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAGAGCTCCATCA 2068
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2069 CCCCTTCTGCCATGTGAAAGGGAGAAGACAAACATCCACGAACCAGGAAGTGGGTCCTCACCAGAAAACAAATC 2142
Query 949 ------------------------------------------------------------------------ 948
Sbjct 2143 TGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGTTGTTGATAAACCA 2214
