Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07654
- Subject:
- XR_937031.1
- Aligned Length:
- 2154
- Identities:
- 942
- Gaps:
- 1210
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGAAGGCCCCTCGGCCTCAGCAGAGCGCTATCCTCCACTGGTTCCCCGGGTTCCCCGGCTTGCTACCGGGCT 74
Query 1 -------------------------------------------ATGGCGGAGGTGAAGGTGAAGGTGCAGCCGC 31
|||||||||||||||||||||||||||||||
Sbjct 75 GCTCCGTGCATCTTTCCCCCCAGGCGTCAGGAACTGCGCCCTCATGGCGGAGGTGAAGGTGAAGGTGCAGCCGC 148
Query 32 CTGACGCGGATCCGGTCGAAATAGAAAACAGGATTATAGAATTATGTCACCAGTTCCCTCATGGAATCACAGAC 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGACGCGGATCCGGTCGAAATAGAAAACAGGATTATAGAATTATGTCACCAGTTCCCTCATGGAATCACAGAC 222
Query 106 CAAGTAATTCAGAATGAAATGCCTCATATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTAT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAAGTAATTCAGAATGAAATGCCTCATATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTAT 296
Query 180 GGGTCAGTTGGATCTCTTAAGGAGCAATACGGGCCTTTTATATAGAATAAAGGACTCTCAGAATGCTGGTAAAA 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGTCAGTTGGATCTCTTAAGGAGCAATACGGGCCTTTTATATAGAATAAAGGACTCTCAGAATGCTGGTAAAA 370
Query 254 TGAAGGGATCCGATAACCAAGAAAAACTAGTATATCAAATCATAGAGGATGCAGGAAATAAAGGAATATGGAGC 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGAAGGGATCCGATAACCAAGAAAAACTAGTATATCAAATCATAGAGGATGCAGGAAATAAAGGAATATGGAGC 444
Query 328 AGAGATATCCGCTATAAAAGTAATTTGCCATTAACAGAAATCAACAAAATTCTGAAGAATCTGGAAAGTAAAAA 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGAGATATCCGCTATAAAAGTAATTTGCCATTAACAGAAATCAACAAAATTCTGAAGAATCTGGAAAGTAAAAA 518
Query 402 GCTTATCAAAGCTGTTAAGTCTGTAGCAGCCTCAAAAAAGAAGGTGTATATGCTCTATAACCTGCAGCCAGACC 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTTATCAAAGCTGTTAAGTCTGTAGCAGCCTCAAAAAAGAAGGTGTATATGCTCTATAACCTGCAGCCAGACC 592
Query 476 GGTCTGTGACTGGTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCAACAG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGTCTGTGACTGGTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCAACAG 666
Query 550 TGTTTTAAATTCCTACAGTCCAAGGCAGAAACAGCACGAGAAAGCAAACAGAACCCAATGATACAAAGAAATAG 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGTTTTAAATTCCTACAGTCCAAGGCAGAAACAGCACGAGAAAGCAAACAGAACCCAATGATACAAAGAAATAG 740
Query 624 TTCATTTGCCTCATCACATGAAGTGTGGAAATATATCTGCGAATTGGGAATCAGTAAGGTAGAGTTATCCATGG 697
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 741 TTCATTTGCCTCATCACATGAAGTGTGGAAATATATCTGCGAATTGGGAATCAGTA----AGAGTTATCCATGG 810
Query 698 AAGACATTGAAACCATCCTGAATACACTCATTTATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAA 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 AAGACATTGAAACCATCCTGAATACACTCATTTATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAA 884
Query 772 GGCACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACGGGTTT 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 885 GGCACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACAGGTTT 958
Query 846 GGTCCGGGCACCCTGTGGACTCTGCCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACT 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GGTCCGGGCACCCTGTGGACTCTGCCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACT 1032
Query 920 GTATTTACATGACAGAGTGGCACGAATTT--------------------------------------------- 948
|||||||||||||||||||||.|||||||
Sbjct 1033 GTATTTACATGACAGAGTGGCTCGAATTTTAATAGAGAGCTATGAACTTTATTGACATTTTGCAAATGAAGTTA 1106
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1107 CTTAGGGAGCAGATAATTTAATTCATGATGGAACACGAAATCTCCTTGAAAGCAAACTTCACAATAATGGACGT 1180
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1181 AGACTTGCTGCTATGAAAACATATTTTTTTTATTTATGAAGACTAAATTTATATTGGTAAAATAGCCAGTAGAA 1254
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1255 TATGAAAGAAATAAGGTTAGTAGTGAAATTCATTCTTCAATAAATAAAACACTTTGAAACTCCGGAGGACCACA 1328
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1329 TCTTTCAAGACTTCTGATGGGTCAAGGAAAAAGATGCCAACATACCCGTATTTACCAAGTACTATGATAATGGC 1402
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1403 TAGAGTATAAAAATGTTCTTTTTAAAGTTATTTATTAAGTTCTTCATTGGAAGTTTTTTTTTATATCTGGTTCA 1476
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1477 CTACCACCATTTTCTGTTTCCTACTTTCTCAGTGGTTTCATTGAAAAGAAATTAGAAGGGGTTAAAGGCAGGAA 1550
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1551 TAGCAAAGAGTGCAAACTTGGGGTATGACTGGGGGAGAGTGGAACATGCCTTTTCCGCACAATATTAATTCCTT 1624
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1625 TTTGTATCAGAAATGTTCTTTTAGGAGATTATGCTACCATACTTACTTCAAACCCAATGACTACTGTCAAGGAC 1698
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1699 ATATTTTCAGTACATAAATACTATCATTTTCATTCTAAAGAATATTTTCACTGTTCCTTCTTTCTTAAAGTCTT 1772
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1773 ATGTTTCACTCTTTAACTCAAATGTATTCTTTGTTAGAATTTACCCTAGATTCTTATTTAATGTCTGCAGTAGA 1846
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1847 CTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAATGTGATGGTATTTGGAGGTGGGGC 1920
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1921 TTTTGGTAAGTGATAGGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAG 1994
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1995 AGAGCTCCATCACCCCTTCTGCCATGTGAAAGGGAGAAGACAAACATCCACGAACCAGGAAGTGGGTCCTCACC 2068
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2069 AGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGTTGT 2142
Query 949 -------- 948
Sbjct 2143 TGATAAAC 2150
