Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07723
• Subject: XM_017026182.2
• Aligned Length: 1999
• Identities: 1148
• Gaps: 671

Alignment

Query    1  ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC  74
            ||||.|||||.|.||||||..|||.||||.|||||||||||||||||||||.|||||.||.||||||||||||.
Sbjct    1  ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA  74

Query   75  CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC  148
            |||||||||.|||||||||||||||||.||||||||||||||||.|..|||||...||||||||.||.||||||
Sbjct   75  CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC  148

Query  149  AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAG--CCCAGCACCCTGGGACAGACAGAACC  220
            |||||..||.||||.|.|.||||||||||||  |||.||||.||||  ..|||||||||||...|.||.||.||
Sbjct  149  AGGGGGGCCAGGAGACCCAGGAGTACCGTCT--ATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCC  220

Query  221  CACTGGAGCCCAAGAACAA-GGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTG  293
            |||.|||||....|||.|| |||||| |||.|||||||||||||.||...|||..|..|||||.|.||.|||||
Sbjct  221  CACAGGAGCTTGTGAAGAAGGGCCAG-TTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTG  293

Query  294  TTACTATCGCAG---CCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACA  364
            |||||||.|.||   |.|||.||||.|.|||.||..||||||||||||||||||||||.|||||||||||||||
Sbjct  294  TTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACA  367

Query  365  GTAAACCCACCCTTTCAGCCCTG---------------------------------------------------  387
            ..|||||||||||.|||||||.|                                                   
Sbjct  368  TCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCA  441

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  442  CAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCC  515

Query  388  -------------------------------------------------CCGAGTC------------------  394
                                                             |||||||                  
Sbjct  516  CCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGT  589

Query  395  -------------------CTCT---------------------------------------------------  398
                               ||||                                                   
Sbjct  590  GCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGT  663

Query  399  --------------------------------------------------------------------------  398
                                                                                      
Sbjct  664  GTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTG  737

Query  399  --------------------------------------------------------------------------  398
                                                                                      
Sbjct  738  TGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCG  811

Query  399  ----------------------------------------------TGTGA-----------------------  403
                                                          |||||                       
Sbjct  812  CACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTAC  885

Query  404  --------------------------------------------------------------------------  403
                                                                                      
Sbjct  886  AGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGC  959

Query  404  --------------------------------------------------------------------------  403
                                                                                      
Sbjct  960  CCCTCGCCCATCCTTCTTCTCTCCAGGACAGTTCTATGACAGAGTCTCCCTCTCGGTGCAGCCGGGCCCCACGG  1033

Query  404  ---CCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATGG----ACACTTTCCTTCTGATCAA  470
               ||||||||.|||.|||||||||||||||||||||||.|.|    ||||    |.|||||||||||||.|||
Sbjct 1034  TGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGG----ATGGATGCAAACTTTCCTTCTGACCAA  1103

Query  471  GGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCA  544
            ||||.|||||||..||..||.|..||.|||.||||||..|.||..|.||||..|..||||||||||||||||||
Sbjct 1104  GGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCA  1177

Query  545  TGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCA----CTACCT  614
            ||.|||||||||||||||..||.|.|||||||||||||||||.|.|||||||..|||    |||    ||||||
Sbjct 1178  TGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCT----CCAAACCCTACCT  1247

Query  615  GCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCTCACCCACA  687
            ||||.|.||||||||||||||||||||||||.|.|||||||||.|.| ||| |||.|||||   |||.||.|||
Sbjct 1248  GCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGG-GGGCCCCAG---CTCCCCGACA  1317

Query  688  A---GGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACAGTGG  758
            |   |..||..|||.|||.|||||||||||||||||||||||||||..||.||.|||||.|..|||||.|||||
Sbjct 1318  ACAGGCCCCACCTCCACATCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGG  1391

Query  759  TCTGAGAAGGCA-CTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATCCTGCTTCT-CTC-----CCTCCTC  825
            ||||.||||||| ||||| |||..|||||||..|||||||||.|..||||||.||.|| |||     |||||||
Sbjct 1392  TCTGGGAAGGCACCTGGG-GGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTC  1464

Query  826  CTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCAACG  899
            |||||||||.||||||.|||..|.||||||||.||||||.||||||.|.||||||||.|||||||||||||||.
Sbjct 1465  CTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCAACA  1538

Query  900  TCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACGTCC  973
            ||||.|||||||||..|.|||||||||||..|||.|.|||||.|||.|||||||||||||||||||.||.|.||
Sbjct 1539  TCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGATGCCC  1612

Query  974  AGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAGAGC  1047
            |||.|||||||.|||.|||||||||||||.||||||||||||||||.||||||||.||||||||||||||||||
Sbjct 1613  AGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGCAGAGC  1686

Query 1048  CCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTC  1121
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1687  CCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTC  1760

Query 1122  TCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGGACA  1195
            ||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 1761  TCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACA  1834

Query 1196  CTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAGAAG  1269
            |||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||||||||||.|.||
Sbjct 1835  CTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAG  1908

Query 1270  GCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCA  1343
            ||||||||||||||||||||||||||||||.||||||||||||.||||||..||||.|||||||||||||||||
Sbjct 1909  GCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCA  1982

Query 1344  C  1344
            |
Sbjct 1983  C  1983