Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07723
- Subject:
- XM_017030296.1
- Aligned Length:
- 1949
- Identities:
- 1140
- Gaps:
- 658
Alignment
Query 1 ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC 74
||||..|||.||.||||.||.|||||||||||.||||||||||||||||||||||||..|.|||||||||||||
Sbjct 1 ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCC 74
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC 148
|.|||||||||||||||||||||||||||||||||||||||||||||||||||.|.|.||||||||||||||||
Sbjct 75 CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTC 148
Query 149 AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCA 222
||||||.||.||||||.|.|||||||||.|||.|||||||||.||||||||..||||.|||||||.|.||||||
Sbjct 149 AGGGGAGCCAGGAGGCCCAGGAGTACCGACTGCATAAAGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCA 222
Query 223 CTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTA 296
|||||.||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||..|
Sbjct 223 CTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGCACCATGCAGGGAGATACCGCTGCCA 296
Query 297 CTATCGCAGCCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACAGTAAAC 370
||||..||||.|||.||||||||||.|||||||.||||||||||||.||||||||||||||||||||||.||||
Sbjct 297 CTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGATGGTGATGACAGGAGCCTACAGCAAAC 370
Query 371 CCACCCTTTCAGCCCTGCCGAGTCCT------------------------------------------------ 396
|||||||.|||||||||||.||.|||
Sbjct 371 CCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAG 444
Query 397 -------------------------------------------------------------------------- 396
Sbjct 445 GGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCA 518
Query 397 -------------------------------------------------------------------------- 396
Sbjct 519 CAGTCGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTGGAGGTTCACATGCTATT 592
Query 397 -------------------------------------------------------------------------- 396
Sbjct 593 ACTATTATACAAACACCCCCTGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCT 666
Query 397 -------------------------------------------------------------------------- 396
Sbjct 667 AGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTC 740
Query 397 ------------------------------------------------CTT----------------------- 399
|||
Sbjct 741 TGATGTCGGCTACAACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGC 814
Query 400 -------------------------------------------------------------------------- 399
Sbjct 815 CCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTCCAATGGGGGCCAGTACAGGTGC 888
Query 400 -------------------------------------------------------------------------- 399
Sbjct 889 TACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGAACATCCTGATGGCAGGACAGAT 962
Query 400 ----------------------------------------GTGACCTCAGGAAAGAGCGTGACCCTGCTGTGTC 433
|||.||||||||.|||.|||||||||||||||||
Sbjct 963 CTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTC 1036
Query 434 AGTCACGGAGCCCAATGGACACTTTCCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCA 507
|||||.||.|.|...|.||||||||||||||||.|||.||..|||||||||||||||.|||||.||||||||||
Sbjct 1037 AGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCA 1110
Query 508 GAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAG 581
..|.||||||||||..||.||||||||||||||||||||||||||||||||||||..||||.||||||||||||
Sbjct 1111 ATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAG 1184
Query 582 GTGCTTCAGCTCACACGGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAG 655
|||||.|.|||||.||.|||.|..||.|.||||||||||.|||||||||||.||||||||||||.|.|||||||
Sbjct 1185 GTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTCACCCCAGTGAGCCCCTGGAGCTCGTGGTCTCAG 1258
Query 656 GATCCT-TGGAGGGTCCCAGGCCCTCACCCACAAGGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCT 728
||..|| ||||||.| ||||.|.|.||||||||.||.| |||||
Sbjct 1259 GACACTCTGGAGGCT-CCAGCCTCCCACCCACAGGGCC-----------------GCCCT-------------- 1300
Query 729 CATGCCTACAGGGTCAGTCCCCCACA-GTGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTC 801
||||| .|||||||.||||..||..||||||..||||.|||||||.|||||.|
Sbjct 1301 ---------------------CCACACCTGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCC 1353
Query 802 TCCATCCTGCTTCTCTCCCTCCTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGC 875
|.|.|||||||.||||.|||||||||||||||||||||||.||....||||||..|.|||||||||||||..|.
Sbjct 1354 TTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCTGA 1427
Query 876 CCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGA 949
|||||||.||.||||||||||.||||||.||||||||||.|||.||||||||||||||.|||||||.|.|||||
Sbjct 1428 CCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGA 1501
Query 950 GGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGG 1023
|||||||||||||||||||||||||||.|||||||.|||.|||||||||||||.||||||||.||||||||.||
Sbjct 1502 GGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCCGTGAAGGACACACAGTCTGAGGACAGG 1575
Query 1024 GTGGAAATGGACACTCGGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTC 1097
|||||..||||||.||.|||||||||||||||||||||||||||||||||||||||||||..||||||||||||
Sbjct 1576 GTGGAGCTGGACAGTCAGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTC 1649
Query 1098 CAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1171
|||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1650 CAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1723
Query 1172 CAGAAGAGGACAGACAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTG 1245
..|||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||.||||
Sbjct 1724 TGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTG 1797
Query 1246 CACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAG 1319
||||||||.|||||.||||.|||||||||||||||||||||||||||||||||||...||||||||||||||||
Sbjct 1798 CACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAG 1871
Query 1320 TGTCTATGCCACTCTGGCCATCCAC 1344
..||||.||||||||||||||||||
Sbjct 1872 CATCTACGCCACTCTGGCCATCCAC 1896
