Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07729
- Subject:
- NR_103518.2
- Aligned Length:
- 2735
- Identities:
- 1204
- Gaps:
- 1420
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCAGCCTGGGCGGCACAGCCAGATGCGAGATGCGTCTCTGCTGATCTGAGTCTGCCTGCAGCATGGACCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTTCCCTGAAGCATCTCCAGGGCTGGAGGGACGACTGCCATGCACCGAGGGCTCATCCATCCACAGAGCAGGG 148
Query 1 -----------------ATGACCTCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGCCTGGACCCCAGGACC 57
||||||.||||||||||||||||||||||||||||||||||.||||.||||.|||||
Sbjct 149 CAGTGGGAGGAGACGCCATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACC 222
Query 58 CACGTGCAGGCAGGGCCCCTCCCCAAGCCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCACCCAAGGGAGTCC 131
||||||||||||||||.|||||||||||||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct 223 CACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCC 296
Query 132 TGTGACCCTCAGGTGTCAGGGGAGCCTGGAGACGCAGGAGTACCATCTATATAGAGAAAAGAAAACAGCACTCT 205
||||||||||||||||||||||.|||.||||||.||||||||||.||||||||||||||||||||||||||.||
Sbjct 297 TGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCT 370
Query 206 GGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCTATCCATCACCTGGGAACATGCA 279
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||..||
Sbjct 371 GGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACA 444
Query 280 GGGCGGTATTGCTGTATCTATGGCAGCCACACTGTAGGCCTCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGT 353
|||||||||.|||||..||||||.|||.||||||.|||||.|||||||||||||||||||||||||||||||||
Sbjct 445 GGGCGGTATCGCTGTTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGT 518
Query 354 GACAGGAGCCTACAGCAAACCCACCCTCTCAGCTCTGCCCAGCCCTGTGGTGACCTCAGGAGGGAATGTGACCA 427
||||||||||||||.||||||||||||||||||.|.|||||||||.|||||||.|||||||||||||||.|||.
Sbjct 519 GACAGGAGCCTACATCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCC 592
Query 428 TCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGC 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGC 666
Query 502 CTGAACTCCCATTCCCATGCCCGTGGGTCATCCCGGGCCATCTTCTCCGTGGGCCCCGTGAGCCCAAGTCGCAG 575
|||||||||||..||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 667 CTGAACTCCCAGCCCCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAG 740
Query 576 GTGGTCGTACAGGTGCTATGGTTATGACTCGCGCGCTCCCTATGTGTGGTCTCTACCCAGTGATCTCCTGGGGC 649
|||||.||||||||||||||.||||||||||..|.|||||||||.||||||||||||||||||||||||||.||
Sbjct 741 GTGGTGGTACAGGTGCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGC 814
Query 650 TCCTGGTCCCAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCGGGTCCTGTCGTGGCCCCTGGGGAGAAG 723
|||||||||.||||||||||||||||||||||||||||||||||||.||||||.||||||||||||.|||||..
Sbjct 815 TCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACC 888
Query 724 CTGACCTTCCAGTGTGGCTCTGATGCCGGCTACGACAGATTTGTTCTGTACAAGGAGTGGGGACGTGACTTCCT 797
|||||..|.|||||||||||||||||.||||||.||||||||||||||||.|||||..|||.||||||||||||
Sbjct 889 CTGACTCTGCAGTGTGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCT 962
Query 798 CCAGCGCCCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCT 871
.||||.|.|||||...||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCAGCTCGCTGGCGCACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCT 1036
Query 872 ACGGGGGCCAGTACACATGCTCCGGTGCATACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGAC 945
|||||||||||||||.|||||.|||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGAC 1110
Query 946 ATCCTGATCACAGGACAGATCCGTGCCAGACCCTTCCTCTCCGTGCGGCCGGGCCCCACAGTGGCCTCAGGAGA 1019
|||||||||.||||||||.||..||.||||..||.||||||.||||.||||||||||||.||||||||||||||
Sbjct 1111 ATCCTGATCGCAGGACAGTTCTATGACAGAGTCTCCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGA 1184
Query 1020 GAACGTGACCCTGCTGTGTCAGTCACAGGGAGGGATGCACACTTTCCTTTTGACCAAGGAGGGGGCAGCTGATT 1093
|||||||||||||||||||||||||||||||.|||||||.|||||||||.|||||||||||||||||||||||.
Sbjct 1185 GAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATG 1258
Query 1094 CCCCGCTGCGTCTAAAATCAAAGCGCCAATCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCG 1167
.|||...||||||||.|||||.|..|||||||||.||.|||||||||||||||||||||.|||||||||||||.
Sbjct 1259 ACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCA 1332
Query 1168 GCCCACGCGGGGACCTACAGGTGCTACGGCTCACTCAGCTCCAACCCCTACCTGCTGACTCACCCCAGTGACCC 1241
|||||.||||||||||||||||||||||||||||..||||||||.|||||||||||||||||||||||||||||
Sbjct 1333 GCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTGCTGACTCACCCCAGTGACCC 1406
Query 1242 CCTGGAGCTCGTGGTCTCAGGAGCAGCTGAGACCCTCAGC-CCACCACAAAACAAGTCCGA-CTCCAAGGCTGG 1313
||||||||||||||||||||||.|..|||.|..||.|||| ||.|.|| ||||.|.||.| |||||...||||
Sbjct 1407 CCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGAC--AACAGGCCCCACCTCCACATCTGG 1478
Query 1314 ---TGAG------------------------------------------------------------------- 1317
||||
Sbjct 1479 CCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGGTCTGGGAAGGCACCTGGGGGTTGTGA 1552
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1553 TCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGT 1626
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1627 CAGGGCAAACACTGGACATCGAGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGAAG 1700
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1701 CACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTA 1774
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1775 TGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGG 1848
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1849 ACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGAT 1922
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1923 GTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCC 1996
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1997 CTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCAGGGGGGGACGCAGACCCCACACTC 2070
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2071 CATGGAGTCTGGAATGCATGGGAGCTGCCCCCCCAGTGGACACCATTGGACCCCACCCAGCCTGGATCTACCCC 2144
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2145 AGGAGACTCTGGGAACTTTTAGGGGTCACTCAATTCTGCAGTATAAATAACTAATGTCTCTACAATTTTGAAAT 2218
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2219 AAAGCAACAGACTTCTCAATAATCAATGAAGTAGCTGAGAAAACTAAGTCAGAAAGTGCATTAAACTGAATCAC 2292
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2293 AATGTAAATATTACACATCAAGCGATGAAACTGGAAAACTACAAGCCACGAATGAATGAATTAGGAAAGAAAAA 2366
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2367 AAGTAGGAAATGAATGATCTTGGCTTTCCTATAAGAAATTTAGGGCAGGGCACGGTGGCTCACGCCTGTAATTC 2440
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2441 CAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGTTCAGGAGATCGAGACCATCTTGGCCAACATGGTGAAA 2514
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2515 CCCTGTCTCTCCTAAAAATACAAAAATTAGCTGGATGTGGTGGCAGTGCCTGTAATCCCAGCTATTTGGGAGGC 2588
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2589 TGAGGCAGGAGAATCGCTTGAACCAGGGAGTCAGAGGTTTCAGTGAGCCAAGATCGCACCACTGCTCTCCAGCC 2662
Query 1318 ----------------------------------------------------------------------- 1317
Sbjct 2663 TGGCGACAGAGGGAGACTCCATCTCAAATTAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAAAAAAAA 2733
