Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07841
- Subject:
- XM_006519160.3
- Aligned Length:
- 2375
- Identities:
- 1471
- Gaps:
- 673
Alignment
Query 1 ATGGCGACGCCGGGAAGCGAACCCCAACCTTTCGTCCCGGCCCTTTCGGTAGCTACTCTGCACCCACTTCATCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCCCCACCACCACCACCACCACCATCAGCACCACGGAGGAACCGGCGCCCCCGGCGGGGCGGGTGGTGGCGGCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTGGCAGCGGGGGCTTCAACCTGCCCTTGAACCGGGGTCTGGAGCGCGCGCTTGAGGAGGCGGCCAACTCCGGG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGGCTGAACCTGAGCGCCAGGAAATTGAAGGAATTTCCCCGTACCGCAGCCCCCGGGCATGACCTCTCGGACAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGTGCAGGCAGACTTATCTAAAAACAGACTGGTTGAAGTTCCAATGGAATTGTGCCATTTTGTATCACTGGAAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TTCTTAATCTGTATCACAACTGTATCAGAGTCATTCCTGAGGCCATCGTTAATCTGCAGATGCTGACTTACCTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AACTTGAGTCGAAATCAGCTGTCCGCCCTGCCTGCCTGCCTGTGTGGTCTGCCTCTCAAAGTCTTAATCGCAAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TAACAACAAACTTGGATCATTACCAGAAGAGATAGGTCAGCTCAAACAGTTAATGGAGCTGGATGTCAGCTGCA 592
||||||.|||||||.||.||||
Sbjct 1 ----------------------------------------------------ATGGAGTTGGATGTGAGTTGCA 22
Query 593 ACGAGATCACAGCGTTGCCCCAGCAGATAGGTCAGTTGAAATCTCTACGAGAACTGAATGTCAGAAGAAATTAC 666
||||||||||.||.|||||||||||||||||.|||.||||.|||||.||.|||||.||||||.|||||||||||
Sbjct 23 ACGAGATCACGGCCTTGCCCCAGCAGATAGGCCAGCTGAAGTCTCTGCGGGAACTCAATGTCCGAAGAAATTAC 96
Query 667 CTTAAAGTTTTACCACAAGAACTAGTAGATCTTCCCTTGGTAAAGTTTGACTTTTCCTGCAACAAAGTGCTCGT 740
|||||.||||||||||.|||.|||||||||||.||||||||||||||||||||||||||||||||.|||||.||
Sbjct 97 CTTAAGGTTTTACCACCAGAGCTAGTAGATCTCCCCTTGGTAAAGTTTGACTTTTCCTGCAACAAGGTGCTGGT 170
Query 741 GATTCCAATTTGTTTTAGAGAGATGAAGCAGCTGCAAGTGTTACTACTTGAGAATAACCCTCTGCAGTCTCCTC 814
|||.||..|.||.||.||.|||||||||||||||||.|||.|.||.||||||||.||||||||||||||.||||
Sbjct 171 GATCCCCGTCTGCTTCAGGGAGATGAAGCAGCTGCAGGTGCTCCTGCTTGAGAACAACCCTCTGCAGTCCCCTC 244
Query 815 CAGCACAGATTTGCACAAAGGGCAAAGTTCACATATTTAAGTATCTGAGCATACAAGCATGCCAGATTAAGACA 888
|.||.|||||||||||.||.||.|||||.|||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 245 CGGCGCAGATTTGCACGAAAGGAAAAGTACACATATTTAAGTATTTGAGCATACAAGCATGCCAGATTAAGACA 318
Query 889 GCTGACTCCCTTTATCTCCACACCATGGAGAGGCCACATTTACACCAGCACGTGGAAGATGGCAAGAAGGATTC 962
..||||||.|||||.||||.||||||.||||||||.|||||||||||.|||||||||||..|.||||||||.||
Sbjct 319 AGTGACTCTCTTTACCTCCCCACCATAGAGAGGCCCCATTTACACCAACACGTGGAAGACAGTAAGAAGGACTC 392
Query 963 TGATTCGGGAGTTGGAAGTGATAATGGAGATAAGCGATTATCTGCCACCGAGCCTTCTGACGAAGACACTGTTA 1036
.||.||.||.|||||||||||.||||||||||||||.|||||||||||||||||.|||||.||.|||||.||||
Sbjct 393 CGACTCAGGGGTTGGAAGTGACAATGGAGATAAGCGGTTATCTGCCACCGAGCCCTCTGATGAGGACACGGTTA 466
Query 1037 GCCTCAATGTGCCAATGTCAAACATCATGGAAGAAGAACAGATCATCAAGGAGGACTCGTGCCATCGCCTTAGC 1110
|||||||||.|||.||||||||||||.||||||||||.||||.||||||||||||..||||||||||.||.|.|
Sbjct 467 GCCTCAATGCGCCCATGTCAAACATCGTGGAAGAAGACCAGACCATCAAGGAGGATGCGTGCCATCGGCTCACC 540
Query 1111 CCCGTTAAAGGGGAATTTCATCAGGAATTTCAACCGGAGCCTTCCCTTTTGGGTGACAGCACCAACTCAGGAGA 1184
||...|||||| .||||||||.|||.||||||||.|||||||.||||||..||.|||||||.|
Sbjct 541 CCAACTAAAGG------------AGAATTTCAGCCGAAGCCTTCCATTTTGGGGGACAGCGGCATCTCAGGACA 602
Query 1185 AGAAAGAGACCAGTTTACTGATAGAGCAGATGGTCTCCATTCGGAATTTATGAACTA---TAAGG--CAAGGGC 1253
|||||||||.|||.||.|||...|.|||||||.||..||.||||.|.|||||||||| ||||| || |||
Sbjct 603 AGAAAGAGAGCAGCTTGCTGGCCGTGCAGATGCTCGACACTCGGGACTTATGAACTATATTAAGGACCA--GGC 674
Query 1254 AGAAGACTGTGAAGAGCTGTTACGGATAGAAGAGGATGTGCACTGGCAAACTGAGGGCATAATAAGTTCATCCA 1327
||||||||||||||||||.||.||||||||||||||||..||||||||.|..||||...||.|||.||||||||
Sbjct 675 AGAAGACTGTGAAGAGCTATTGCGGATAGAAGAGGATGCTCACTGGCACATGGAGGAACTACTAAATTCATCCA 748
Query 1328 AAGATCAGGACATGGATATAGCAATGATCGAGCAGCTGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGA 1401
||||.|.|||..||||||||||.|||||.||||||||||||||.|| |||..||||.||.||||||||.||.
Sbjct 749 AAGACCGGGAGCTGGATATAGCGATGATTGAGCAGCTGAGAGAGGC---AGAGCTGCTTCAGGATCCCAACGGT 819
Query 1402 TTAAGCACAGATATTACAGAGAGAAGTGTTTTAAACCTATATCCTATGGGATCAGCAGAAGCCTTAGAATTACA 1475
.|||||.|||||||.|.||||||||||.||||.|||||.|..||.||||..||||.||||||||.||||||.|.
Sbjct 820 CTAAGCGCAGATATCATAGAGAGAAGTATTTTGAACCTGTTCCCCATGGACTCAGGAGAAGCCTCAGAATTCCC 893
Query 1476 AGATTCTGCACTGAATGGTCAAATACAGCTGGAGACATCTCCGGTGTGTGAGGTGCAAAGTGATCTAACATTAC 1549
.|||.||.||||.|||||.||..|.|||||||||||.|||||.|...||||||||||||.||||||||..||||
Sbjct 894 TGATCCTTCACTCAATGGCCAGTTGCAGCTGGAGACGTCTCCAGACCGTGAGGTGCAAAATGATCTAATGTTAC 967
Query 1550 AGAGTAACGGGAGCCAGTATTCTCCAAATGAGATTAGAGAGAACTCCCCTGCAGTCTCTCCTACCACAAACAGC 1623
|||||||.||.||||||||||||||.||||||||..||||||||||||||.||||.||||||||..||||||.|
Sbjct 968 AGAGTAATGGAAGCCAGTATTCTCCCAATGAGATACGAGAGAACTCCCCTTCAGTGTCTCCTACTGCAAACATC 1041
Query 1624 ACAGCTCCATTTGGCCTGAAGCCTCGATCA-------------------------------------------- 1653
||||||||.|||||||||||||||||.|||
Sbjct 1042 ACAGCTCCGTTTGGCCTGAAGCCTCGTTCAGGTTCCTGGTGCCCTGAGGAGGTACAGGGCAGCCTGCAGGCAGA 1115
Query 1654 -------------------------------------GACCCAGCCCTCATTCTTCCTCCTATCTCCTTCAACA 1690
|||||||||||||||||.|||||||||||||||||||
Sbjct 1116 GTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCATGACCCAGCCCTCATTCTCCCTCCTATCTCCTTCAACA 1189
Query 1691 CACTTACACAGGCACAGACATGGGACAGCTCTAGCTACAGTGTTCCATCTGAAGGAGACAGTGACAATGTGTTT 1764
||||||||||||||||.||||||||||.||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1190 CACTTACACAGGCACAAACATGGGACAACTCTAGCTACAGTGTTCCATCTGAAGGAAACAGTGACAATGTGTTT 1263
Query 1765 CTAAGACCTCAGAGAAATTTGGAATCTATAGACCCGCAGTTTACAATCCGGAGGAAAATGGAGCAGATGAGAGA 1838
||||||||.||||||||.|||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 1264 CTAAGACCGCAGAGAAACTTGGAATCTATAGACCCACAGTTTACGATCCGGAGGAAGATGGAGCAGATGAGAGA 1337
Query 1839 AGAGAAAGAGCTGGTGGAACAACTTCGTGAGAGCATTGAGATGAGATTGAAGGTCAGTCTACACGAAGACCTGG 1912
.|||||.|||||||||||.|||||.||.||||||||.||||||||..|||||||.|..||.||.||||||||||
Sbjct 1338 GGAGAAGGAGCTGGTGGAGCAACTCCGAGAGAGCATCGAGATGAGGCTGAAGGTGACCCTTCATGAAGACCTGG 1411
Query 1913 GGGCAGCCCTCATGGATGGTGTCGTCCTCTGCCATCTGGTCAACCACATCCGCCCACGGTCGGTTGCAAGCATC 1986
||||.||.||||||||||||||||||||||||||.||||.|||||||.||||.||..|.||.||.||.||||||
Sbjct 1412 GGGCGGCACTCATGGATGGTGTCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATCTGTCGCCAGCATC 1485
Query 1987 CATGTCCCATCACCAGCGGTTCCCAAACTTAGCATGGCCAAATGCAGAAGAAATGTGGAAAACTTTTTGGAAGC 2060
||||||||.|||||.||.|||||.|||||.|||||||||||.|||||.||.||.|||||||||||.||||||||
Sbjct 1486 CATGTCCCCTCACCGGCTGTTCCTAAACTCAGCATGGCCAAGTGCAGGAGGAACGTGGAAAACTTCTTGGAAGC 1559
Query 2061 GTGCCGAAAATTAGGAGTACCAGAGGCTGACCTCTGCTCTCCGTGTGACATCCTGCAGTTGGATTTTCGTCACA 2134
||||.|.|||.|.||.||.||.|||||.|||||.||||||||||.|||||||||||||||||||||||||||||
Sbjct 1560 GTGCAGGAAACTTGGCGTTCCCGAGGCCGACCTGTGCTCTCCGTATGACATCCTGCAGTTGGATTTTCGTCACA 1633
Query 2135 TTCGAAAGACTGTTGACACTCTGCTGGCACTCGGGGAGAAAGCCCCACCACCAACTTCTGCCCTCCGCTCCAGG 2208
||||||||||||||||||||||||||||.||||||||||||.||||||...|||||||||||||||||||||||
Sbjct 1634 TTCGAAAGACTGTTGACACTCTGCTGGCCCTCGGGGAGAAACCCCCACAGTCAACTTCTGCCCTCCGCTCCAGG 1707
Query 2209 GACCTTATAGGCTTCTGTCTTGTCCATATTCTCTTTATAGTGCTGGTCTATATCACTTACCACTGGAATGCTCT 2282
|||||||||||||||||||||.|||||.|||||.|||||||.||||||||||||.||||||.||||||||||||
Sbjct 1708 GACCTTATAGGCTTCTGTCTTATCCATGTTCTCCTTATAGTACTGGTCTATATCGCTTACCGCTGGAATGCTCT 1781
Query 2283 GTCCGCA 2289
|||.||.
Sbjct 1782 GTCTGCC 1788
