Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07841
- Subject:
- XM_017020484.1
- Aligned Length:
- 2297
- Identities:
- 1403
- Gaps:
- 874
Alignment
Query 1 ATGGCGACGCCGGGAAGCGAACCCCAACCTTTCGTCCCGGCCCTTTCGGTAGCTACTCTGCACCCACTTCATCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCCCCACCACCACCACCACCACCATCAGCACCACGGAGGAACCGGCGCCCCCGGCGGGGCGGGTGGTGGCGGCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTGGCAGCGGGGGCTTCAACCTGCCCTTGAACCGGGGTCTGGAGCGCGCGCTTGAGGAGGCGGCCAACTCCGGG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGGCTGAACCTGAGCGCCAGGAAATTGAAGGAATTTCCCCGTACCGCAGCCCCCGGGCATGACCTCTCGGACAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGTGCAGGCAGACTTATCTAAAAACAGACTGGTTGAAGTTCCAATGGAATTGTGCCATTTTGTATCACTGGAAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TTCTTAATCTGTATCACAACTGTATCAGAGTCATTCCTGAGGCCATCGTTAATCTGCAGATGCTGACTTACCTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AACTTGAGTCGAAATCAGCTGTCCGCCCTGCCTGCCTGCCTGTGTGGTCTGCCTCTCAAAGTCTTAATCGCAAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TAACAACAAACTTGGATCATTACCAGAAGAGATAGGTCAGCTCAAACAGTTAATGGAGCTGGATGTCAGCTGCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACGAGATCACAGCGTTGCCCCAGCAGATAGGTCAGTTGAAATCTCTACGAGAACTGAATGTCAGAAGAAATTAC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTTAAAGTTTTACCACAAGAACTAGTAGATCTTCCCTTGGTAAAGTTTGACTTTTCCTGCAACAAAGTGCTCGT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GATTCCAATTTGTTTTAGAGAGATGAAGCAGCTGCAAGTGTTACTACTTGAGAATAACCCTCTGCAGTCTCCTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ----------------------ATGAAGCAGCTGCAAGTGTTACTACTTGAGAATAACCCTCTGCAGTCTCCTC 52
Query 815 CAGCACAGATTTGCACAAAGGGCAAAGTTCACATATTTAAGTATCTGAGCATACAAGCATGCCAGATTAAGACA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 53 CAGCACAGATTTGCACAAAGGGCAAAGTTCACATATTTAAGTATCTGAGCATACAAGCATGCCAGATTAAGACA 126
Query 889 GCTGACTCCCTTTATCTCCACACCATGGAGAGGCCACATTTACACCAGCACGTGGAAGATGGCAAGAAGGATTC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 GCTGACTCCCTTTATCTCCACACCATGGAGAGGCCACATTTACACCAGCACGTGGAAGATGGCAAGAAGGATTC 200
Query 963 TGATTCGGGAGTTGGAAGTGATAATGGAGATAAGCGATTATCTGCCACCGAGCCTTCTGACGAAGACACTGTTA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 TGATTCGGGAGTTGGAAGTGATAATGGAGATAAGCGATTATCTGCCACCGAGCCTTCTGACGAAGACACTGTTA 274
Query 1037 GCCTCAATGTGCCAATGTCAAACATCATGGAAGAAGAACAGATCATCAAGGAGGACTCGTGCCATCGCCTTAGC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 275 GCCTCAATGTGCCAATGTCAAACATCATGGAAGAAGAACAGATCATCAAGGAGGACTCGTGCCATCGCCTTAGC 348
Query 1111 CCCGTTAAAGGGGAATTTCATCAGGAATTTCAACCGGAGCCTTCCCTTTTGGGTGACAGCACCAACTCAGGAGA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 349 CCCGTTAAAGGGGAATTTCATCAGGAATTTCAACCGGAGCCTTCCCTTTTGGGTGACAGCACCAACTCAGGAGA 422
Query 1185 AGAAAGAGACCAGTTTACTGATAGAGCAGATGGTCTCCATTCGGAATTTATGAACTATAAGGCAAGGGCAGAAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 AGAAAGAGACCAGTTTACTGATAGAGCAGATGGTCTCCATTCGGAATTTATGAACTATAAGGCAAGGGCAGAAG 496
Query 1259 ACTGTGAAGAGCTGTTACGGATAGAAGAGGATGTGCACTGGCAAACTGAGGGCATAATAAGTTCATCCAAAGAT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 ACTGTGAAGAGCTGTTACGGATAGAAGAGGATGTGCACTGGCAAACTGAGGGCATAATAAGTTCATCCAAAGAT 570
Query 1333 CAGGACATGGATATAGCAATGATCGAGCAGCTGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGATTAAG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 571 CAGGACATGGATATAGCAATGATCGAGCAGCTGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGATTAAG 644
Query 1407 CACAGATATTACAGAGAGAAGTGTTTTAAACCTATATCCTATGGGATCAGCAGAAGCCTTAGAATTACAAGATT 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 645 CACAGATATTACAGAGAGAAGTGTTTTAAACCTATATCCTATGGGATCAGCAGAAGCCTTAGAATTACAAGATT 718
Query 1481 CTGCACTGAATGGTCAAATACAGCTGGAGACATCTCCGGTGTGTGAGGTGCAAAGTGATCTAACATTACAGAGT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CTGCACTGAATGGTCAAATACAGCTGGAGACATCTCCGGTGTGTGAGGTGCAAAGTGATCTAACATTACAGAGT 792
Query 1555 AACGGGAGCCAGTATTCTCCAAATGAGATTAGAGAGAACTCCCCTGCAGTCTCTCCTACCACAAACAGCACAGC 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 793 AACGGGAGCCAGTATTCTCCAAATGAGATTAGAGAGAACTCCCCTGCAGTCTCTCCTACCACAAACAGCACAGC 866
Query 1629 TCCATTTGGCCTGAAGCCTCGATCAGACCCAGCCCTCATTCTTCCTCCTATCTCCTTCAACACACTTACACAGG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 TCCATTTGGCCTGAAGCCTCGATCAGACCCAGCCCTCATTCTTCCTCCTATCTCCTTCAACACACTTACACAGG 940
Query 1703 CACAGACATGGGACAGCTCTAGCTACAGTGTTCCATCTGAAGGAGACAGTGACAATGTGTTTCTAAGACCTCAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 941 CACAGACATGGGACAGCTCTAGCTACAGTGTTCCATCTGAAGGAGACAGTGACAATGTGTTTCTAAGACCTCAG 1014
Query 1777 AGAAATTTGGAATCTATAGACCCGCAGTTTACAATCCGGAGGAAAATGGAGCAGATGAGAGAAGAGAAAGAGCT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 AGAAATTTGGAATCTATAGACCCGCAGTTTACAATCCGGAGGAAAATGGAGCAGATGAGAGAAGAGAAAGAGCT 1088
Query 1851 GGTGGAACAACTTCGTGAGAGCATTGAGATGAGATTGAAGGTCAGTCTACACGAAGACCTGGGGGCAGCCCTCA 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089 GGTGGAACAACTTCGTGAGAGCATTGAGATGAGATTGAAGGTCAGTCTACACGAAGACCTGGGGGCAGCCCTCA 1162
Query 1925 TGGATGGTGTCGTCCTCTGCCATCTGGTCAACCACATCCGCCCACGGTCGGTTGCAAGCATCCATGTCCCATCA 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163 TGGATGGTGTCGTCCTCTGCCATCTGGTCAACCACATCCGCCCACGGTCGGTTGCAAGCATCCATGTCCCATCA 1236
Query 1999 CCAGCGGTTCCCAAACTTAGCATGGCCAAATGCAGAAGAAATGTGGAAAACTTTTTGGAAGCGTGCCGAAAATT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1237 CCAGCGGTTCCCAAACTTAGCATGGCCAAATGCAGAAGAAATGTGGAAAACTTTTTGGAAGCATGCCGAAAATT 1310
Query 2073 AGGAGTACCAGAGGCTGACCTCTGCTCTCCGTGTGACATCCTGCAGTTGGATTTTCGTCACATTCGAAAGACTG 2146
||||||||||||||...|.||.|| ||||| || |..|||||.|
Sbjct 1311 AGGAGTACCAGAGGAAAAGCTATG-TCTCC---------CC--------------CACCACATCC--------- 1351
Query 2147 TTGACACTCTGCTGGCACTCGGGGAGAAAGCCCCACCACCAACTTCTGCCCTCCGCTCCA---GGGACCTTATA 2217
|||| ||||| || |.||| |.||.| ||| |.|||
Sbjct 1352 TTGA--------------------AGAAA-----------AA-----GGCCT--GGTCAAAGTGGG-CATTA-- 1384
Query 2218 GGCTTCTGTCTTGTCCATATTC--TCTTTA-TAGTGCTGGTCTATATCAC--TTACCACTGGAATGCTCTGTCC 2286
|| |||| .|.||| ||| |.||||| |.|| |||.|||||||.|
Sbjct 1385 --------------CC--ATTCAAGCATTACTAG---------ACATCACCGTAAC-----GAAGGCTCTGTTC 1428
Query 2287 GCA 2289
.||
Sbjct 1429 ACA 1431
