Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07865
- Subject:
- NM_015255.2
- Aligned Length:
- 5288
- Identities:
- 1266
- Gaps:
- 3994
Alignment
Query 1 ATGGCGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGC 74
Query 75 GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCT 148
Query 149 ACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAA 222
Query 223 TGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTG 296
Query 297 TGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGT 370
Query 371 GCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTC 444
Query 445 TGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAAT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAAT 518
Query 519 TGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTA 592
Query 593 CGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAG 666
Query 667 AAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAGTTATTTATACTCTTCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 667 AAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTATGAACAAGTTATTTATACTCTTCA 740
Query 741 GAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTG 814
Query 815 TTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAG 888
Query 889 CCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCT 962
Query 963 GGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATG 1036
Query 1037 GTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATAT 1110
Query 1111 CATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAA 1184
Query 1185 CTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAG-AGTTTTCAGTCGCAGAC----CTCTC 1253
.||..|||..||||||||.||||.|.||...|||||.|||||..||| ||| ||||..||| ||.||
Sbjct 1185 TTACCAGCAGTTGCAGAGAGATTTTATGGAGGATGATCACGAGCGAGCAGT-----GTCGGTGACTGCTCTATC 1253
Query 1254 GGTTCAGATATTCACGGTTCCTTCACTTTTCTCTATCTCT-GCTGGGCGCAGTGGCTCACCTCTG--------- 1317
.||.|||.|.|||||.| ||| ||| |||| ||| ||.| .|||||.|.|.|
Sbjct 1254 TGTCCAGTTCTTCACCG------CAC------CTA-CTCTGGCT---CGAA--TGCTCATCACAGAAGAAAACT 1309
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1310 TAATGAGCATTATCATTAAGACTTTTATGGATCATTTGAGACATCGAGATGCCCAGGGCAGATTTCAGTTTGAA 1383
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1384 CGATACACTGCTTTACAAGCCTTCAAATTTAGGAGAGTACAGAGCCTTATTTTAGATCTCAAGTATGTGTTAAT 1457
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1458 TAGCAAACCAACTGAATGGTCAGATGAGCTGAGGCAGAAGTTCCTAGAAGGGTTTGATGCCTTTTTGGAATTAC 1531
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1532 TAAAATGTATGCAGGGAATGGATCCAATTACACGTCAAGTAGGACAACATATTGAAATGGAACCAGAGTGGGAA 1605
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1606 GCAGCCTTCACACTACAAATGAAATTAACACATGTCATTTCAATGATGCAGGACTGGTGTGCTTCAGATGAAAA 1679
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1680 AGTGTTAATCGAAGCTTACAAGAAATGTCTCGCTGTACTGATGCAGTGTCATGGTGGTTATACTGATGGTGAAC 1753
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1754 AGCCAATCACACTAAGCATTTGTGGACATTCAGTGGAAACTATCAGATACTGTGTTTCCCAAGAAAAAGTTAGC 1827
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1828 ATTCACCTCCCAGTTTCTCGCTTACTTGCAGGTTTACATGTATTATTAAGCAAAAGTGAAGTGGCATATAAATT 1901
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1902 TCCAGAGCTCCTACCTCTAAGTGAACTTAGCCCACCCATGTTGATAGAACACCCTCTTAGATGTCTTGTTCTGT 1975
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1976 GTGCCCAAGTACATGCCGGAATGTGGAGAAGAAATGGGTTCTCTCTAGTAAACCAGATTTATTACTACCATAAT 2049
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2050 GTGAAATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTCAGACAGGTGTCTCCATGATGGATCCAAA 2123
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2124 TCATTTCCTGATGATCATGCTCAGCCGCTTTGAACTTTATCAGATTTTCAGTACTCCAGACTATGGAAAAAGAT 2197
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2198 TTAGTTCTGAGATTACCCATAAGGATGTTGTTCAGCAGAACAATACTCTAATAGAAGAAATGCTATACCTCATT 2271
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2272 ATAATGCTTGTTGGAGAGAGATTTAGTCCTGGAGTTGGACAGGTAAATGCTACAGATGAAATCAAGCGAGAGAT 2345
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2346 TATCCATCAGTTGAGTATCAAGCCTATGGCTCATAGTGAATTGGTAAAGTCTTTACCTGAAGATGAGAACAAGG 2419
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2420 AGACTGGCATGGAGAGTGTAATCGAAGCAGTTGCCCATTTCAAGAAACCTGGATTAACAGGACGAGGCATGTAT 2493
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2494 GAACTGAAACCAGAATGTGCCAAAGAGTTCAACTTGTATTTCTATCACTTTTCAAGGGCAGAACAGTCCAAGGC 2567
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2568 AGAAGAAGCGCAACGGAAATTGAAAAGACAAAATAGAGAAGATACAGCACTCCCACCTCCGGTGTTGCCTCCAT 2641
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2642 TCTGCCCTCTGTTTGCAAGCCTGGTTAACATTTTGCAGTCAGATGTCATGTTGTGCATCATGGGAACAATTCTG 2715
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2716 CAATGGGCTGTGGAACATAATGGATATGCCTGGTCAGAGTCCATGCTGCAAAGGGTGTTACATTTAATTGGCAT 2789
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2790 GGCACTACAAGAAGAAAAACAACATTTAGAGAATGTCACGGAAGAGCATGTAGTAACATTTACCTTCACTCAGA 2863
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2864 AGATATCAAAACCTGGTGAAGCGCCAAAAAATTCTCCTAGCATACTAGCTATGCTGGAAACACTACAAAATGCT 2937
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2938 CCCTACCTAGAAGTCCACAAAGACATGATTCGGTGGATATTGAAGACTTTTAATGCTGTTAAAAAGATGAGGGA 3011
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3012 GAGTTCACCTACCAGTCCCGTGGCAGAGACAGAAGGAACCATAATGGAAGAGAGTTCAAGGGACAAAGACAAAG 3085
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3086 CTGAGAGGAAGAGAAAAGCAGAGATTGCCAGACTGCGCAGAGAAAAGATCATGGCTCAGATGTCTGAAATGCAG 3159
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3160 CGGCATTTTATTGATGAAAACAAAGAACTCTTTCAGCAGACATTAGAACTGGATGCCTCAACCTCTGCTGTTCT 3233
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3234 TGATCATAGCCCTGTGGCTTCAGATATGACACTTACAGCACTGGGCCCCGCACAAACTCAGGTTCCTGAACAAA 3307
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3308 GACAATTCGTTACATGTATATTGTGTCAAGAGGAGCAAGAAGTTAAAGTGGAAAGCAGGGCAATGGTCTTGGCA 3381
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3382 GCATTTGTTCAGAGATCAACTGTATTATCAAAAAACAGAAGTAAATTTATTCAAGATCCAGAAAAATATGATCC 3455
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3456 ATTATTCATGCACCCTGATCTGTCTTGTGGAACACACACTAGTAGCTGTGGGCACATTATGCATGCCCATTGTT 3529
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3530 GGCAAAGGTATTTTGATTCCGTTCAAGCTAAAGAACAGCGAAGGCAACAGAGATTACGCTTACATACGAGCTAT 3603
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3604 GATGTAGAAAACGGAGAATTCCTTTGCCCCCTTTGTGAATGCTTGAGTAATACTGTTATTCCTCTGCTGCTTCC 3677
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3678 TCCAAGAAATATTTTTAACAACAGGTTAAATTTTTCAGACCAACCAAATCTGACTCAGTGGATTAGAACAATAT 3751
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3752 CTCAGCAAATAAAAGCATTACAGTTTCTTAGGAAAGAAGAAAGTACTCCTAATAATGCCTCTACAAAGAATTCA 3825
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3826 GAAAATGTGGATGAATTACAGCTCCCTGAAGGGTTCAGGCCTGATTTTCGTCCTAAGATCCCTTATTCTGAGAG 3899
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3900 CATAAAAGAAATGCTAACGACATTTGGAACTGCTACCTACAAGGTGGGACTAAAGGTTCATCCCAATGAAGAGG 3973
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3974 ATCCTCGTGTTCCCATAATGTGTTGGGGTAGCTGCGCGTACACCATCCAAAGCATAGAAAGAATTTTGAGTGAT 4047
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4048 GAAGATAAACCATTGTTTGGTCCTTTACCTTGCAGACTGGATGACTGTCTTAGGTCATTGACGAGATTTGCCGC 4121
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4122 AGCACACTGGACAGTGGCATCAGTTTCAGTGGTGCAAGGACATTTTTGTAAACTTTTTGCATCACTGGTGCCTA 4195
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4196 ATGACAGCCATGAGGAACTTCCATGCATATTAGATATTGACATGTTTCATTTATTGGTGGGCTTGGTGCTTGCA 4269
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4270 TTTCCTGCGTTGCAGTGTCAGGATTTTTCAGGGATCAGCCTTGGCACTGGAGACCTTCACATTTTCCATCTGGT 4343
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4344 TACTATGGCACACATCATACAGATCTTACTTACCTCATGTACAGAAGAGAATGGCATGGATCAAGAAAATCCCC 4417
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4418 CTTGTGAAGAAGAATCAGCAGTTCTTGCTTTGTATAAAACACTTCACCAGTATACGGGAAGTGCCTTGAAAGAA 4491
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4492 ATACCATCCGGCTGGCATCTGTGGAGGAGTGTCAGAGCTGGAATCATGCCTTTCCTGAAGTGTTCTGCTTTATT 4565
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4566 TTTTCATTACTTAAATGGAGTTCCTTCCCCACCCGACATTCAAGTTCCTGGAACAAGCCATTTTGAACATTTAT 4639
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4640 GTAGCTATCTTTCCCTACCAAACAACCTCATTTGCCTTTTTCAAGAAAATAGTGAGATAATGAATTCACTGATT 4713
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4714 GAAAGTTGGTGCCGTAACAGTGAAGTTAAAAGATATCTAGAAGGTGAAAGAGATGCTATAAGATATCCAAGAGA 4787
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4788 ATCTAACAAATTAATAAACCTTCCAGAGGATTACAGCAGCCTCATTAATCAAGCATCCAATTTCTCGTGCCCGA 4861
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4862 AATCAGGTGGTGATAAGAGCAGAGCCCCAACTCTGTGCCTTGTGTGCGGATCTCTGCTGTGCTCCCAGAGTTAC 4935
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4936 TGCTGCCAGACTGAACTGGAAGGGGAGGATGTAGGAGCCTGCACAGCTCACACCTACTCCTGTGGCTCTGGAGT 5009
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5010 GGGCATCTTCCTGAGAGTACGGGAATGTCAGGTGCTATTTTTAGCTGGCAAAACCAAAGGCTGTTTTTATTCTC 5083
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5084 CTCCTTACCTTGATGACTATGGGGAGACCGACCAGGGACTCAGACGGGGAAATCCTTTACATTTATGCAAAGAG 5157
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5158 CGATTCAAGAAGATTCAGAAGCTCTGGCACCAACACAGTGTCACAGAGGAAATTGGACATGCACAGGAAGCCAA 5231
Query 1318 ---------------------------------- 1317
Sbjct 5232 TCAGACACTGGTTGGCATTGACTGGCAACATTTA 5265
