Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07865
- Subject:
- NM_146078.3
- Aligned Length:
- 5288
- Identities:
- 1102
- Gaps:
- 3994
Alignment
Query 1 ATGGCGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGC 74
||||||||||||.|.|||||.||||||||||||||||||||.||.||||||||||||||.|||||.|||||.||
Sbjct 1 ATGGCGTCGGAGATGGAGCCCGAGGTGCAGGCCATCGACCGCAGTTTGCTGGAATGTTCTGCCGAAGAGATCGC 74
Query 75 GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCT 148
.||||.|||||||||||||||.|||||||..||||||||||||||||||||||||||||.|||.||||||||||
Sbjct 75 AGGGAGATGGCTGCAAGCAACCGACCTCAACAGAGAAGTGTACCAGCATTTAGCCCACTGTGTGCCCAAAATCT 148
Query 149 ACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAA 222
|||||.||||.||.|||||.||.||.|||||.|||||||.||||||||||||..|..||.|||||||.|||||.
Sbjct 149 ACTGCCGGGGCCCTAACCCCTTCCCTCAGAAGGAAGACACGCTGGCACAGCACATCCTGCTGGGACCGATGGAG 222
Query 223 TGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTG 296
||||||.|.||.|.||||||.|||||..|.|||||||||||.||.|||||.||||||||.||||||||.||.||
Sbjct 223 TGGTACATCTGCGCTGAAGACCCTGCGCTGGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTG 296
Query 297 TGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGT 370
|||.||.||.||||||||.||.||.||||||||.||.||||||||||||||||||||.||.||.||||||||.|
Sbjct 297 TGGCCGAGTGTTTAAAGTGGGGGAACCTACATACTCCTGCAGAGACTGTGCAGTTGACCCCACCTGTGTTTTAT 370
Query 371 GCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTC 444
|||||||||||||..||||||||||.||.|||||.|||||||||||||||||.|||||.|||||.||.||.|||
Sbjct 371 GCATGGAGTGCTTCCTGGGAAGTATCCATAGAGACCATCGATATAGGATGACCACATCGGGAGGAGGGGGCTTC 444
Query 445 TGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAAT 518
||||||||||||||.|||||.||.|||||||||||.||||||||.||.||.||..|.||.|.||.|||||||.|
Sbjct 445 TGTGACTGTGGTGACACTGAGGCGTGGAAAGAGGGACCTTACTGCCAGAAGCACAAGCTCAGCAGCTCTGAAGT 518
Query 519 TGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTA 592
||.|||.||.||||||||||||||.|||.||||||||||||||||.||.||||||||.||||||||||||||||
Sbjct 519 TGTGGAGGAGGAGGATCCTCTTGTGCATCTATCAGAAGATGTGATCGCCAGAACTTACAACATTTTTGCTATTA 592
Query 593 CGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAG 666
.||||||.|||||||||||.|||.|.||||||||||||||||||||||||||.|.|||.|||||..|||.||||
Sbjct 593 TGTTTCGATATGCAGTAGATATACTGACCTGGGAAAAAGAAAGTGAATTGCCTGAAGACTTAGAAGTGGCAGAG 666
Query 667 AAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAGTTATTTATACTCTTCA 740
|||||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||.||||||||.|||||
Sbjct 667 AAGAGTGACACCTACTACTGCATGCTGTTTAATGATGAGGTTCACACCTATGAGCAAGTCATTTATACCCTTCA 740
Query 741 GAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTG 814
|||||||||.|||||||||||.||.|||||.|||||.||||||||||||||.|||||||||||.||||||||||
Sbjct 741 GAAAGCTGTGAACTGTACACAGAAGGAAGCCATTGGCTTTGCAACTACAGTTGATCGAGATGGCCGTAGGTCTG 814
Query 815 TTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAG 888
|.||||||||||||||.|||||.|||||.||||||||..||||.||||||||.||.|||||.||||||||.|||
Sbjct 815 TCCGATATGGAGATTTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTGAGGAACACCAGCAGACAGACCAAG 888
Query 889 CCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCT 962
||.||||||||||||||||||||.||.||..|.|..||.|||||||||||||||||||||..|.||||.|||||
Sbjct 889 CCGCTCAAAGTTCAAGTTATGCACTCCTCCGTGGCTGCTCATCAGAATTTTGGTTTGAAAGCTCTGTCGTGGCT 962
Query 963 GGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATG 1036
|||||||.||||||||||.|||||||||||||||.|||||||.|||||||||||.|||||||||||.|||||||
Sbjct 963 GGGAAGTGTTATTGGATACTCAGATGGCCTTCGCAGGATTTTGTGTCAAGTTGGATTACAAGAAGGTCCAGATG 1036
Query 1037 GTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATAT 1110
|.||||||||||||||.||.||||||||||||||||.|||||||||||||||||||||.|||||||||||.|||
Sbjct 1037 GCGAAAACTCTTCTCTGGTCGACAGACTGATGCTTAATGATTCCAAATTATGGAAAGGGGCTAGGAGTGTGTAT 1110
Query 1111 CATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAA 1184
||.|||||||||||||||||.|||||.|||||..|.||.||.|||||.||.||.||..||||||||||.|||||
Sbjct 1111 CACCAGTTGTTCATGAGCAGCCTGCTCATGGACCTCAAGTATAAGAAGCTGTTCGCGCTTCGATTTGCTAAAAA 1184
Query 1185 CTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGA-CAGAGAGTTTTCAGTCGCAGAC----CTCTC 1253
.||...||..||||||||.||||.|.||...|||||.||||| |.|..||| ||||..||| ||.||
Sbjct 1185 TTACCGGCAGTTGCAGAGGGATTTTATGGAGGATGATCACGAGCGGGCAGT-----GTCGGTGACTGCTCTGTC 1253
Query 1254 GGTTCAGATATTCACGGTTCCTTCACTTTTCTCTATCTCTGCTGGGCGC-AGTG--GCTCAC---------CTC 1315
.||.|||.|.|||||.|..||..|.|| ||||| |.|| .||||| | |
Sbjct 1254 TGTCCAGTTCTTCACCGCACCGACGCT-----------------GGCGCGAATGCTCCTCACAGAAGAGAAC-C 1309
Query 1316 TG------------------------------------------------------------------------ 1317
||
Sbjct 1310 TGATGACCGTTATCATTAAGGCTTTCATGGACCATTTGAAACACAGAGATGCCCAGGGCAGATTCCAGTTTGAA 1383
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1384 CGCTACACTGCCCTCCAAGCCTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGATCTCAAGTATGTATTGAT 1457
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1458 TAGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAGAAGTTCTTACAAGGGTTCGATGCCTTCTTGGAATTAC 1531
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1532 TGAAGTGCATGCAGGGAATGGACCCGATCACGCGTCAGGTGGGACAGCACATTGAGATGGAGCCAGAGTGGGAA 1605
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1606 GCAGCCTTCACACTGCAGATGAAGCTGACACACGTCATCTCAATGGTGCAGGACTGGTGTGCTCTGGACGAAAA 1679
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1680 AGTGTTAATTGAAGCTTACAAGAAATGCCTGGCTGTGCTGACACAGTGTCATGGCGGATTTACTGATGGTGAAC 1753
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1754 AGCCAATCACACTCAGTATTTGTGGACACTCGGTGGAAACCATCAGATACTGTGTTTCCCAAGAAAAAGTTAGC 1827
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1828 ATTCACCTCCCAATTTCTCGCTTGCTTGCAGGTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCATATAAATT 1901
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1902 TCCAGAGCTCCTACCTCTAAGTGAACTGAGCCCACCCATGTTGATAGAACATCCTCTTAGATGTCTTGTCTTAT 1975
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1976 GTGCTCAAGTGCATGCTGGGATGTGGAGAAGAAATGGCTTCTCTCTAGTAAATCAGATCTATTACTACCATAAT 2049
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2050 GTGAAATGCAGGCGAGAGATGTTCGACAAGGACATAGTGATGCTTCAGACAGGTGTCTCCATGATGGACCCAAA 2123
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2124 CCACTTCCTGATGATCATGCTCAGCCGCTTTGAACTCTATCAGCTCTTCAGCACGCCTGACTATGGGAAGAGAT 2197
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2198 TCAGTTCTGAGGTTACCCATAAGGACGTCGTTCAGCAGAACAACACTCTGATCGAAGAGATGCTCTACCTCATC 2271
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2272 ATCATGCTTGTGGGAGAAAGATTCAACCCTGGGGTTGGACAGGTGGCTGCCACAGATGAAATCAAGAGGGAGAT 2345
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2346 TATCCATCAGTTGAGCATCAAGCCTATGGCTCACAGTGAGCTGGTGAAGTCTCTGCCTGAAGATGAGAACAAGG 2419
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2420 AGACCGGCATGGAGAGCGTCATCGAGTCCGTTGCACATTTCAAGAAACCTGGGCTCACAGGGCGAGGCATGTAT 2493
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2494 GAGCTGAAGCCAGAGTGTGCCAAAGAGTTCAACCTGTATTTTTATCATTTCTCCAGGGCAGAGCAGTCCAAGGC 2567
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2568 AGAGGAAGCTCAGCGGAAATTGAAAAGAGAAAATAAAGAAGATACAGCACTCCCTCCTCCGGCTTTGCCACCGT 2641
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2642 TCTGCCCTTTGTTCGCGAGTCTGGTTAACATCTTGCAGTGTGACGTCATGCTGTACATCATGGGAACGATCCTG 2715
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2716 CAGTGGGCTGTAGAGCATCACGGGTCTGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTTGATCGGGAT 2789
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2790 GGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTGCAGACCTTCACCTTCACACAGA 2863
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2864 AGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAGCTATGCTGGAGACCTTGCAGAACGCC 2937
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2938 CCCTCCCTGGAAGCCCACAAGGACATGATCAGGTGGTTGCTAAAGATGTTTAATGCAATTAAGAAGATAAGAGA 3011
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3012 GTGTTCATCCAGCAGCCCTGTGGCCGAGGCGGAGGGAACCATAATGGAGGAGAGCTCAAGAGACAAGGACAAAG 3085
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3086 CAGAGAGGAAAAGAAAAGCCGAGATCGCCAGACTGCGCCGGGAGAAGATCATGGCCCAGATGTCTGAGATGCAG 3159
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3160 CGGCACTTCATTGACGAAAACAAAGAGCTCTTCCAGCAGACCCTAGAGCTGGACACCTCTGCCTCTGCCACTCT 3233
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3234 TGACAGCAGCCCTCCCGTTTCAGACGCAGCTCTTACAGCACTGGGCCCAGCACAGACACAGGTCCCTGAACCGA 3307
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3308 GACAGTTTGTCACCTGTATATTATGTCAAGAGGAGCAAGAGGTGACTGTGGGAAGCAGGGCGATGGTCTTGGCA 3381
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3382 GCGTTTGTTCAGAGGTCAACGGTTCTGTCAAAAGACAGGACGAAAACCATCGCGGACCCAGAAAAATATGATCC 3455
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3456 ATTATTCATGCACCCCGATCTGTCTTGTGGGACACACACTGGCAGCTGTGGGCACGTTATGCATGCCCATTGTT 3529
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3530 GGCAAAGGTATTTTGATTCCGTTCAAGCCAAGGAGCAGCGAAGGCAGCAGCGGCTGCGCTTGCACACTAGCTAC 3603
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3604 GATGTAGAGAATGGCGAGTTCCTCTGCCCGCTCTGTGAGTGCCTGAGCAACACGGTGATCCCCCTGCTGCTTCC 3677
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3678 TCCCAGGAGCATCCTCAGCAGGAGGTTAAATTTTTCAGACCAACCAGATCTGGCACAGTGGACGAGAGCAGTAA 3751
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3752 CACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAATGCTGCTGACACGTCTTCTTCAGAGGACACA 3825
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3826 GAAGCCATGAATATAATACCGATCCCCGAAGGCTTCAGGCCTGATTTTTATCCTAGGAACCCATATTCTGATAG 3899
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3900 CATAAAAGAAATGTTAACGACATTTGGAACGGCTGCTTACAAGGTGGGACTGAAGGTTCATCCTAATGAAGGTG 3973
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3974 ACCCCCGTGTGCCCATCCTGTGCTGGGGGACCTGTGCATACACCATCCAGAGCATAGAAAGAATTTTGAGTGAT 4047
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4048 GAGGAGAAGCCTGTTTTTGGACCTCTGCCTTGTAGACTGGACGACTGTCTCAGGTCGTTAACACGGTTTGCAGC 4121
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4122 AGCACATTGGACAGTGGCGTTACTTCCTGTGGTACAAGGACACTTCTGTAAACTCTTTGCATCCTTGGTGCCTA 4195
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4196 GTGACAGCTATGAAGACCTCCCGTGCATACTAGACATCGACATGTTTCACTTGCTGGTGGGCCTGGTGCTCGCT 4269
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4270 TTCCCAGCTCTGCAGTGTCAGGATTTTTCAGGAAGCAGCCTGGCCACTGGGGACCTGCACATCTTCCACTTGGT 4343
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4344 TACCATGGCACACATCGTACAGATCTTACTTACCTCATGTACAGAAGAGAATGGCATGGATCAAGAGAATCCCA 4417
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4418 CTGGGGAAGAAGAACTGGCCATTCTCTCTTTGCACAAAACACTTCACCAGTATACTGGAAGTGCCTTGAAAGAA 4491
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4492 GCCCCCTCCGGCTGGCACCTGTGGAGGAGCGTCCGGGCCGCCATCATGCCTTTCCTCAAGTGCTCTGCTTTGTT 4565
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4566 TTTCCACTATTTAAATGGAGTCCCGGCCCCTCCAGACCTTCAAGTTTCTGGAACAAGCCATTTTGAACACTTAT 4639
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4640 GTAACTACCTTTCCCTACCAACCAACCTCATTCACCTTTTTCAAGAAAACAGTGACATCATGAACTCCCTGATT 4713
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4714 GAAAGTTGGTGCCAGAACAGTGAAGTTAAACGGTATCTAAATGGCGAGAGAGGAGCGATAAGCTACCCCAGAGG 4787
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4788 AGCTAACAAACTGATAGACCTTCCAGAGGATTACAGCAGCCTCATTAACCAAGCATCCAATTTCTCGTGCCCCA 4861
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4862 AATCAGGTGGCGACAAGAGCAGAGCTCCTACTCTGTGCCTCGTGTGTGGGAGTCTCCTCTGCTCTCAGAGTTAC 4935
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4936 TGCTGCCAAGCTGAGCTGGAGGGTGAGGACGTCGGAGCCTGCACAGCACACACCTACTCCTGCGGCTCCGGGGC 5009
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5010 CGGCATCTTCCTGAGAGTGCGGGAATGTCAGGTGCTATTTTTAGCTGGCAAAACCAAAGGATGTTTTTATTCTC 5083
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5084 CTCCTTACCTTGACGACTATGGAGAGACCGACCAGGGACTCAGACGAGGAAATCCTTTACATTTATGCCAAGAG 5157
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5158 CGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGAGGCTAA 5231
Query 1318 ---------------------------------- 1317
Sbjct 5232 CCAGACCCTGGTCGGAATTGACTGGCAGCATTTA 5265
