Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07929
Subject:
NM_144954.3
Aligned Length:
1595
Identities:
1347
Gaps:
46

Alignment

Query    1  ATGGGGAAGCGACAGCACCAAAAGGACAAAATGTACATTACCTGTGCTGAATACACTCACTTTTATGGTGGCAA  74
            ||||||||||||||||||||.||||||||.|||||.||.||.||||||||.||||||||.||.||||||||||.
Sbjct    1  ATGGGGAAGCGACAGCACCAGAAGGACAAGATGTATATCACTTGTGCTGAGTACACTCATTTCTATGGTGGCAG  74

Query   75  GAAGCCAGATCTCCCACAAACAAATTTTCGTCGTTTACCTTTTGACCACTGCAGTCTCTCTCTGCAGCCCTTTG  148
            ||||||||||.||.||||.||||.||||||.||.|||||||||||||||||||||||||||||.|||||.||||
Sbjct   75  GAAGCCAGATATCTCACAGACAAGTTTTCGCCGCTTACCTTTTGACCACTGCAGTCTCTCTCTCCAGCCTTTTG  148

Query  149  TCTACCCAGTCTGCACTCCCGATGGCATCGTCTTTGACTTACTGAACATTGTTCCATGGCTTAAGAAGTACGGG  222
            ||||||||||||||||.||.||.||..|||||||||||||.||||||||||||||.||||||||||||||.|||
Sbjct  149  TCTACCCAGTCTGCACCCCAGAAGGTGTCGTCTTTGACTTGCTGAACATTGTTCCCTGGCTTAAGAAGTATGGG  222

Query  223  ACCAACCCCAGCAATGGAGAGAAGCTGGACGGGAGGTCCCTGATCAAGCTGAACTTTTCCAAGAACAGTGAGGG  296
            ||.||.|||||||.|||||||||.||.||.||||.||||.||||||||||||||||..|.||||||||.||.||
Sbjct  223  ACGAATCCCAGCACTGGAGAGAAACTTGATGGGAAGTCCTTGATCAAGCTGAACTTCGCAAAGAACAGCGAAGG  296

Query  297  GAAGTACCACTGCCCAGTGCTGTTTACCGTGTTCACCAACAACACCCACATCGTGGCTGTGAGGACGACCGGCA  370
            |.||||||||||.||||||||||.|.||||||||||..||||||||||.||.|||||..|.|||||.||.||||
Sbjct  297  GCAGTACCACTGTCCAGTGCTGTATTCCGTGTTCACTGACAACACCCATATTGTGGCCATCAGGACAACTGGCA  370

Query  371  ACGTCTACGCCTATGAGGCAGTGGAACAGCTAAATATCAAGGCCAAGAACTTCCGGGACCTGCTGACCGACGAG  444
            |.||||||.||||||||||||||||.||||||||.|||||||||||||||||.|||||.|||.||||.||.|||
Sbjct  371  ATGTCTACACCTATGAGGCAGTGGAGCAGCTAAACATCAAGGCCAAGAACTTGCGGGATCTGTTGACTGATGAG  444

Query  445  CCCTTCTCCCGGCAGGACATCATCACCCTCCAGGACCCCACCAATTTGGACAAGTTCAATGTCTCTAACTTCTA  518
            |||||.|||.||||.||||||||||||||.|||||||||||||||||||||||.||||||||....|||||||.
Sbjct  445  CCCTTTTCCAGGCAAGACATCATCACCCTGCAGGACCCCACCAATTTGGACAAATTCAATGTTAGCAACTTCTT  518

Query  519  TCATGTGAAGAATAACATGAAAATAATAGACCCAGATGAAGAGAAGGCCAAACAGGACCCGTCTTATTATCTGA  592
            .|||||||||||||||||||.||||||||||||||||||.||.|||||||||||.|||||.|||||||||.|||
Sbjct  519  CCATGTGAAGAATAACATGAGAATAATAGACCCAGATGAGGAAAAGGCCAAACAAGACCCATCTTATTATTTGA  592

Query  593  AAAATACAAATGCCGAGACCCGAGAGACCCTGCAGGAGCTCTACAAGGAGTTCAAAGGGGACGAGATTCTGGCA  666
            ||||.||||||.|.|||||..|||||||.||.||||||||||||||.|||||||||||.||.||||||.|.|||
Sbjct  593  AAAACACAAATTCGGAGACGAGAGAGACGCTACAGGAGCTCTACAAAGAGTTCAAAGGAGATGAGATTTTAGCA  666

Query  667  GCCACCATGAAGGCC-CCGGAGAAGAAGAAAGTGGACAAGCTGAATGCTGCCCACTATTCCACAGGGAAGGTCA  739
            ||.|||||| ||||| ||.|||||||||||.||||||.|.||||||||.||||||||.||||||||||||||||
Sbjct  667  GCTACCATG-AGGCCACCTGAGAAGAAGAAGGTGGACCAACTGAATGCGGCCCACTACTCCACAGGGAAGGTCA  739

Query  740  GCGCTTCCTTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGCAGCTGCCATCGACGAGGATGTGCTG  813
            |.||.|||||||||||.||.||.|||||.||.||||||||.|||||||||||||.|||.||.||.|||||.|||
Sbjct  740  GTGCATCCTTCACCTCTACTGCCATGGTGCCCGAGACCACGCATGAAGCAGCTGTCATTGATGAAGATGTACTG  813

Query  814  CGCTACCAGTTTGTGAAGAAGAAGGGCTACGTGCGGCTGCACACCAACAAGGGCGACCTCAACCTGGAGCTGCA  887
            ||||||||||||||||||||.||||||||.||..||||.||||||||||||||||||||.|||.|.||||||||
Sbjct  814  CGCTACCAGTTTGTGAAGAAAAAGGGCTATGTAAGGCTTCACACCAACAAGGGCGACCTTAACTTAGAGCTGCA  887

Query  888  CTGCGACCTGACACCAAAAACCTGCGAAAACTTCATCAGGCTTTGCAAGAAGCATTATTACGATGGCACCATCT  961
            |||.||||||||||||||||||||.|||||||||||||.|||.||||||||.||.|||||.|||||.|||||||
Sbjct  888  CTGTGACCTGACACCAAAAACCTGTGAAAACTTCATCAAGCTCTGCAAGAAACAGTATTATGATGGTACCATCT  961

Query  962  TCCACAGATCCATCCGGAACTTTGTGATCCAAGGGGGCGACCCCACAGGCACAGGCACGGGTGGGGAGTCATAC  1035
            |.|||||.||||||.||||||||||||||||.||.||.|||||||||||.||||||||.|||||.|||||||.|
Sbjct  962  TTCACAGGTCCATCAGGAACTTTGTGATCCAGGGCGGTGACCCCACAGGTACAGGCACAGGTGGAGAGTCATTC  1035

Query 1036  TGGGGGAAGCCCTTCAAAGACGAGTTCCGGCCCAACCTCTCGCACACGGGCCGCGGCATCCTCAGCATGGCCAA  1109
            |||||.|||||.||||||||.||||||||.||||||||.||.|||||||||||.||..|.||||||||||||||
Sbjct 1036  TGGGGCAAGCCTTTCAAAGATGAGTTCCGTCCCAACCTTTCACACACGGGCCGTGGGGTGCTCAGCATGGCCAA  1109

Query 1110  CTCCGGGCCCAACAGCAACAGGTCTCAATTCTTCATCACGTTTCGCTCCTGTGCCTACCTGGACAAGAAGCATA  1183
            .||.||||||||||.|||||..|||||.|||||||||||.||.||.|||||.||.||||||||.||||||||||
Sbjct 1110  TTCGGGGCCCAACACCAACAAATCTCAGTTCTTCATCACATTCCGATCCTGCGCTTACCTGGATAAGAAGCATA  1183

Query 1184  CCATCTTTGGACGGGTTGTTGGGGGCTTTGACGTACTGACAGCCATGGAGAATGTGGAGAGTGACCCCAAAACT  1257
            ||||||||||||||||||||||||||||||||...||||||||||||||||||||||||||||||||.||||||
Sbjct 1184  CCATCTTTGGACGGGTTGTTGGGGGCTTTGACACGCTGACAGCCATGGAGAATGTGGAGAGTGACCCTAAAACT  1257

Query 1258  GACCGCCCTAAGGAGGAGATCCGCATTGATG--CCACTACAGTGTTCGTGGACCCCTATGAGGAGGCCGATGCC  1329
            |||||.|||||||||||..|.|.|||  |||  |.||.||||||||.||||||||||||||||||||.||||||
Sbjct 1258  GACCGTCCTAAGGAGGAAGTGCTCAT--ATGTACAACCACAGTGTTTGTGGACCCCTATGAGGAGGCTGATGCC  1329

Query 1330  CAGATTGCGCAGGAGCG---GAAGACACAGC-TCAAGGTAGCCCCGGAGACCAAAGTGAAGAGCAGCCAGCCCC  1399
            ||||||||.|||||.||   ||||||||||| || ||||.|..||.|||.||||.||.||||..||.|||||||
Sbjct 1330  CAGATTGCCCAGGAACGGAAGAAGACACAGCATC-AGGTGGATCCAGAGGCCAAGGTCAAGATGAGTCAGCCCC  1402

Query 1400  AGGCAGGGAGCCAGGGCCCCCAGACCTTCCGCCAGGGCGTGGGCAAGTACATCAACCCAGCAGCCAC----CGA  1469
            ||.|.||.|.||||||.||||||||.|.|||||||||.|||||||||||||||.||||.||.|||||    |||
Sbjct 1403  AGCCTGGAAACCAGGGACCCCAGACATACCGCCAGGGGGTGGGCAAGTACATCCACCCTGCGGCCACGAAACGA  1476

Query 1470  GCAGCAGAGGAAGAGCCCTCAACCAG---TGCCACTGTCCCCATGTCCAAGAAGAAGCCCAGTCGGGGTTTTGG  1540
            .|||||||||||||.||.||.|||||   ||||||   |||||.|.|||||||.|.||||||||||||.|||||
Sbjct 1477  TCAGCAGAGGAAGAACCATCGACCAGCACTGCCAC---CCCCACGGCCAAGAAAAGGCCCAGTCGGGGCTTTGG  1547

Query 1541  GGACTTCAGCTCCTGGTAGCAGCAGGCTGCCTGATGACCAC  1581
            ||||||||||||||||                         
Sbjct 1548  GGACTTCAGCTCCTGG-------------------------  1563

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