Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08019
- Subject:
- XM_017024449.2
- Aligned Length:
- 1540
- Identities:
- 802
- Gaps:
- 719
Alignment
Query 1 ATGAAGTGTGAGCACTGCACGCGCAAGGAATGTAGTAAGAAAACAAAAACTGATGACCAAGAGAATGTGTCAGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGATGCACCGAGTCCAGCCCAGGAAAATGGAGAGAAGGGAGAATTCCACAAGTTGGCTGATGCCAAGATATTTT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGAGCGACTGCCTGGCATGTGACAGCTGTATGACTGCAGAGGAAGGAGTCCAACTTTCCCAGCAAAATGCCAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACTTCTTCCGCGTTCTGAACCTTAACAAGAAATGTGATACCTCAAAGCACAAAGTGCTGGTAGTGTCTGTGTG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCCTCAATCTTTGCCTTATTTTGCTGCTAAATTCAACCTCAGTGTAACTGATGCATCCAGAAGACTCTGTGGTT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCTCAAAAGTCTTGGGGTGCACTATGTATTTGATACGACGATAGCTGCGGATTTTAGTATCCTGGAGAGTCAA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAAGAATTCGTGCGTCGCTATCGCCAGCACAGTGAGGAGGAACGCACCCTGCCCATGCTGACCTCTGCCTG--- 515
|.|..|.||.|||.||| |.| |||.||.|
Sbjct 1 -------------------------------------ATGGGCTCAGCCTTCCC--GGT----TCTTCCAGGAG 31
Query 516 --TC--CTGGCTGGGTCCGATACGCCGAGCGGG---TGC-------TGGGTCG-CCCCATCACTGCCCACCTCT 574
|| ||||||||| ||| ||| ||||..| ||.||
Sbjct 32 GCTCCACTGGCTGGG---------------GGGCTTTGCAGATGTTTGGGAGGACCACA--------------- 75
Query 575 GCACCGCCAAGTCC------CCCCAGCAG---GTCATGG-------GCTCTTTGGTGAAGGATTATTTCGCCAG 632
||.||||| ...|||||| |.||||| || ||||| .||
Sbjct 76 ------CCCAGTCCTGAGGGAGGCAGCAGACAGACATGGATGGAGTGC----TGGTG---------CTC----- 125
Query 633 ACAGCAGAACCTGTCTCCAGAGAAGATTTTCCACGTCATTGTGGCCCCTTGTTATGACAAGAAGCTGGAGGCTC 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 126 ------GAACCTGTCTCCAGAGAAGATTTTCCACGTCATTGTGGCCCCTTGTTATGACAAGAAGCTGGAGGCTC 193
Query 707 TTCAGGAAAGCCTTCCCCCTGCTTTGCATGGCTCCCGGGGCGCTGACTGCGTGTTAACATCAGAAATTAGCCAG 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 TTCAGGAAAGCCTTCCCCCTGCTTTGCATGGCTCCCGGGGCGCTGACTGCGTGTTAACATC------------- 254
Query 781 GCGTGGTGGTGCACACCTGTGATCACAGCTACTCGGGAGGCTGCGGCAAGAGAATCACTTGAACCCGGGAGGCA 854
Sbjct 255 -------------------------------------------------------------------------- 254
Query 855 GAGGTTACAGCGAGACAAGATTGCACCACTGGACTCCAGCCTGGGCGGCGGAGGTGAAATTGCTCAAATAATGG 928
|||||||||||||||||||||||
Sbjct 255 ---------------------------------------------------AGGTGAAATTGCTCAAATAATGG 277
Query 929 AGCAAGGTGACCTCTCAGTGAGAGATGCTGCCGTCGACACTCTGTTTGGAGACTTGAAGGAGGACAAAGTGACG 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 AGCAAGGTGACCTCTCAGTGAGAGATGCTGCCGTCGACACTCTGTTTGGAGACTTGAAGGAGGACAAAGTGACG 351
Query 1003 CGTCATGATGGAGCCAGCTCAGACGGGCACCTGGCACACATCTTCAGACATGCGGCCAAGGAGCTGTTCAACGA 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 CGTCATGATGGAGCCAGCTCAGACGGGCACCTGGCACACATCTTCAGACATGCGGCCAAGGAGCTGTTCAACGA 425
Query 1077 GGATGTGGAGGAGGTCACTTACCGAGCCCTGAGAAACAAAGACTTCCAAGAGGTCACCCTTGAGAAGAACGGAG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 GGATGTGGAGGAGGTCACTTACCGAGCCCTGAGAAACAAAGACTTCCAAGAGGTCACCCTTGAGAAGAACGGAG 499
Query 1151 AGGTGGTGTTACGCTTTGCTGCAGCCTATGGCTTTCGAAACATCCAGAACATGATCCTGAAGCTTAAGAAGGGC 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 500 AGGTGGTGTTACGCTTTGCTGCAGCCTATGGCTTTCGAAACATCCAGAACATGATCCTGAAGCTTAAGAAGGGC 573
Query 1225 AAGTTCCCATTCCACTTTGTGGAGGTCCTCGCCTGTGCTGGAGGATGCTTAAATGGCAGAGGCCAAGCCCAGAC 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 AAGTTCCCATTCCACTTTGTGGAGGTCCTCGCCTGTGCTGGAGGATGCTTAAATGGCAGAGGCCAAGCCCAGAC 647
Query 1299 TCCAGACGGACATGCGGATAAGGCCCTGCTGCGGCAGATGGAAGGCATTTACGCTGACATCCCTGTGCGGCGTC 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 TCCAGACGGACATGCGGATAAGGCCCTGCTGCGGCAGATGGAAGGCATTTACGCTGACATCCCTGTGCGGCGTC 721
Query 1373 CGGAGTCCAGTGCACACGTGCAGGAGCTGTACCAGGAGTGGCTGGAGGGGATCAACTCCCCCAAGGCCCAAGAG 1446
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 722 CGGAGTCCAGTGCACACGTGCAGGAGCTGTACCAGGAGTGGCTGGAGGGGATCAACTCCCCCAAGGCCCGAGAG 795
Query 1447 GTGCTGCATACCACGTACCAGAGCCAGGAGCGTGGCACACACAGCCTGGACATCAAGTGG 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 GTGCTGCATACCACGTACCAGAGCCAGGAGCGTGGCACACACAGCCTGGACATCAAGTGG 855