Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08053
- Subject:
- XM_011544162.1
- Aligned Length:
- 1781
- Identities:
- 744
- Gaps:
- 1033
Alignment
Query 1 ATGAAACGAGTGCGTACCGAGCAGATTCAGATGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTACGTGGACTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATGGTCCCCTGAAGCAAGGACTGCGGCTGTCACAGACTGCTGAAGAGATGGCGGCCAATCTAACAGTGCAAT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGAATCTGGTTGTGCCAACATAGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTT 222
|||| |.||||
Sbjct 1 ------------------------------------------------------------ATGA---ATAGTT- 10
Query 223 GGACGACTGCGGAATTTTC---TCAC----------TGATTCTGATTCCCAGCATAGCCACGAAGTGATGCCTC 283
||||.| |||| | ||||||||||||||||||||||||||||||||||||
Sbjct 11 -------------ATTTCCTGATCACCAAGATAAAGT-ATTCTGATTCCCAGCATAGCCACGAAGTGATGCCTC 70
Query 284 TCCTCTATCCTCTCTTTGTCTACCTCCATCTCAACCTGGTCCAAAACAGTCCGAAGAGCACAGTGGAAAGTTTT 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 71 TCCTCTATCCTCTCTTTGTCTACCTCCATCTCAACCTGGTCCAAAACAGTCCGAAGAGCACAGTGGAAAGTTTT 144
Query 358 TACAGCCGCTTCCATGGAATGTTTCTGCAGAATGCTAGCCAGAAGGATGTCATTGAGCAGCTACAGACCACTCA 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 TACAGCCGCTTCCATGGAATGTTTCTGCAGAATGCTAGCCAGAAGGATGTCATTGAGCAGCTACAGACCACTCA 218
Query 432 AACCATCCAGGACATCCTATCTAACTTCAAGCTTCGAGCATTCCTAGATAACAAGTACGTGGTCCGTCTCCAAG 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 219 AACCATCCAGGACATCCTATCTAACTTCAAGCTTCGAGCATTCCTAGATAACAAGTACGTGGTCCGTCTCCAAG 292
Query 506 AAGACAGCTACAACTACCTTATCCGCTACCTCCAAAGTGACAACAATACTGCCCTGTGCAAAGTCCTCACCTTA 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 AAGACAGCTACAACTACCTTATCCGCTACCTCCAAAGTGACAACAATACTGCCCTGTGCAAAGTCCTCACCTTA 366
Query 580 CATATTCATCTTGACGTGCAGCCTGCCAAGAGAACAGACTATCAGCTGTATGCCAGTGGCAGCTCCTCCCGCAG 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 CATATTCATCTTGACGTGCAGCCTGCCAAGAGAACAGACTATCAGCTGTATGCCAGTGGCAGCTCCTCCCGCAG 440
Query 654 TGAGAACAACGGTTTGGAGCCCCCTGACATGCCCAGCCCTATTCTGCAGAACGAGGCTGCCCTAGAGGTCTTAC 727
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441 TGAGAACAACGGTTTGGAGCCCCCCGACATGCCCAGCCCTATTCTGCAGAACGAGGCTGCCCTAGAGGTCTTAC 514
Query 728 AGGAGAGCATTAAGCGCGTCAAGGATGGGCCTCCCTCCCTCACTACCATCTGCTTCTATGCCTTCTATAACACA 801
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 515 AGGAGAGCATTAAGCGAGTCAAGGATGGGCCTCCCTCCCTCACTACCATCTGCTTCTATGCCTTCTATAACACA 588
Query 802 GAGCAGCTGTTGAACACTGCAGAAATCTCCCCCGATAGCAAGCTGCTTGCTGCTGGGTTTGACAACTCCTGTAT 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 589 GAGCAGCTGTTGAACACTGCAGAAATCTCCCCCGATAGCAAGCTGCTTGCTGCTGGGTTTGACAACTCCTGTAT 662
Query 876 AAAACTTTGGAGTTTACGATCCAAGAAGTTAAAATCAGAGCCCCACCAAGTAGACGTGTCCCGCATCCATTTGG 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 AAAACTTTGGAGTTTACGATCCAAGAAGTTAAAATCAGAGCCCCACCAAGTAGACGTGTCCCGCATCCATTTGG 736
Query 950 CTTGTGATATTCTGGAGGAGGAGGTA------------------------------------------------ 975
|||||||||||||||||||||||| |
Sbjct 737 CTTGTGATATTCTGGAGGAGGAGG-ATGATGAGGATGATAATGCAGGCACGGAGATGAAGATACTGCGGGGCCA 809
Query 976 -------------------------------------------------------------------------- 975
Sbjct 810 CTGCGGACCAGTGTACAGCACGAGGTTCCTCGCGGACAGCTCAGGGTTGCTCTCTTGTTCTGAAGACATGTCCA 883
Query 976 -------------------------------------------------------------------------- 975
Sbjct 884 TCAGATACTGGGATCTGGGGAGTTTCACCAACACTGTGTTGTACCAAGGACATGCCTATCCTGTGTGGGATCTG 957
Query 976 -------------------------------------------------------------------------- 975
Sbjct 958 GACATCAGTCCATATAGCCTGTACTTCGCCAGCGGGTCCCACGACCGCACCGCCAGGCTGTGGTCATTTGATCG 1031
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1032 GACGTACCCGCTGAGGATATATGCAGGACACCTGGCAGATGTGGACTGTGTCAAATTCCACCCTAATTCAAACT 1105
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1106 ACTTGGCCACGGGCTCAACCGACAAGACCGTCCGGCTGTGGAGCGCTCAGCAGGGGAACTCGGTGAGGCTTTTC 1179
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1180 ACAGGCCACCGTGGCCCCGTGCTTTCTCTCGCCTTTTCTCCCAACGGTAAGTACTTGGCGTCTGCTGGCGAGGA 1253
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1254 CCAGCGGTTGAAGCTGTGGGACTTGGCCTCTGGGACCCTTTATAAAGAGTTGAGAGGCCACACAGACAATATCA 1327
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1328 CCAGCCTCACCTTCAGTCCAGACAGCGGCTTGATTGCCTCTGCCTCCATGGACAACTCGGTGCGCGTCTGGGAC 1401
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1402 ATCAGGAACACTTACTGCAGTGCACCTGCCGACGGCTCCTCCAGCGAGCTCGTGGGCGTGTACACCGGGCAGAT 1475
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1476 GAGCAACGTCCTGAGCGTGCAGTTCATGGCCTGTAACCTTCTTCTGGTGACTGGAATTACACAAGAAAATCAGG 1549
Query 976 ----- 975
Sbjct 1550 AACAT 1554
