Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08087
- Subject:
- XR_001755169.2
- Aligned Length:
- 2495
- Identities:
- 519
- Gaps:
- 1925
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA 296
Query 1 ------------------------------------------------------------------ATGAATCC 8
||||||||
Sbjct 297 GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC 370
Query 9 ACAGATCAGAAACCCGATGAAGGCAATGTATCCAGGCACATTCTACTTCCAATTTAAAAAC-----------CT 71
||||||||||||.||||||.||...|||||||.||.||||||||||..|.|.|||.||||| ||
Sbjct 371 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 444
Query 72 ATGG-------------------------GAAGCCAA-------------CGATC-----------GGGAC--- 93
|||| ||||..|| ||.|| |||||
Sbjct 445 ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA 518
Query 94 -------------------------------------------------------------------------- 93
Sbjct 519 GGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAA 592
Query 94 -------GAAA------------CTTGG--CTGTG--------CT-----------------------TCACC- 114
|||| ||||| ||||| || |||||
Sbjct 593 CCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCT 666
Query 115 ------------------------------GTG----GAAGGT------------------------------- 123
||| ||||||
Sbjct 667 GGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTC 740
Query 124 -------------------------------------------------------------------------A 124
|
Sbjct 741 ACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGCA 814
Query 125 TAAAGC-------------------------------------------------------------------- 130
|||.||
Sbjct 815 TAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGGTGAGAGGTGCAGGGGTCAGGGGAGCATGACGGGGA 888
Query 131 ------GCCGCTCAGTTG------TCT--------------------------------CCTG----------- 149
|||.|..||.|| ||| ||||
Sbjct 889 GGAACAGCCTCAGAGATGGATGGATCTGCAATGCCATGGCTGGGGGTGTTCCAGGGCAGCCTGCAGGGGTGGGG 962
Query 150 --------------------------GAAGAC-----------GGGC---------GT---------------- 161
|.|||| |||| ||
Sbjct 963 CTGGCACTGATTGCAACTGACAGCCAGGAGACCAGGCCTGGGAGGGCAGGCCCAGGGTCAGGGGAGAGCCTGAG 1036
Query 162 --CTTCC---------------------------------GAAA------------------------------ 170
||||| ||||
Sbjct 1037 TGCTTCCCACCTCTTCATCTCAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAATGAAGGTCAGCCATTCA 1110
Query 171 ------------------------------------------------------------CCAGGTGGATTCTG 184
.|||||||||.|||
Sbjct 1111 TGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGATTCTCAGGTGGATCCTG 1184
Query 185 AGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGCGACGACATACTGTCTCCTAACACAAAGTAC 258
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||
Sbjct 1185 AGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTCTCCTAACACAAACTAC 1258
Query 259 CAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGACTGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCA 332
.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCA 1332
Query 333 CAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACTACTTCCAGTATCCATGTTACCAGGAGGGGCTCC 406
||||||||||||||||||||||||||||||||||||||.|||||||..|.||.||..||||||||||||||||.
Sbjct 1333 CAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTACTTCTGGGATACAGATTACCAGGAGGGGCTCT 1406
Query 407 GCAGCCTGAGTCAGGAAGGGGTCGCTGTGGAGATCATGGACTATGAAGATTTTAAATATTGTTGGGAAAACTTT 480
|||||||||||||||||||||.|.|.|||.|||||||||.|||..||||||||..||.|||||||.||||||||
Sbjct 1407 GCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGATTTTGTATCTTGTTGGAAAAACTTT 1480
Query 481 GTGTACAATGATAATGAGCCATTCAAGCCTTGGAAGGGATTAAAAACCAACTTTCGACTTCTGAAAAGAAGGCT 554
|||||||.||||.||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 1481 GTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCAACTTTCGACTTCTGAAAAGAAGGCT 1554
Query 555 ACGGGAGAGTCTCCAG---------------------------------------------------------- 570
||||||||.|||||||
Sbjct 1555 ACGGGAGATTCTCCAGTGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTCTTCTAGCCTCCTGCTCATGCTGCAC 1628
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1629 GGGCCTCCCCTCCATCCTGCACCAGCTGTGCTTTTGCCTGGTCATCCTGAGCCCCTCCTGGCCTCAGGGCCATT 1702
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1703 CCATAGTGCCCCCCTGCCTCACCACCTCCTCCCCGCTCTCCCAGGCTCTTCTTGTAGAGGCTCTCCATCCACCT 1776
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1777 CCCCAGTCCTGTTCCCCCAGCCTGGGTGCCCCTAACTTGACTCTTCCCATCTCCCCAGCATAACCAAATCTTTT 1850
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1851 TTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTGTCGCCCAGACTAGAGTGCAATGGCTGGATCTCAGCTC 1924
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1925 ACTGCAAACTCTGCTTACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTCTGAGTAGCTGGGATTACAGATGCCT 1998
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1999 GCCACCACGCCCAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCA 2072
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2073 TGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCATCTCTGTCTCCCAAAGTGCTGGGATTA 2146
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2147 CGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCTTATTAAACTCAATCTAGTCTGGCCCTGGTGACTCA 2220
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2221 CGCCTTTCGGAGGCAGAGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGAGACCAGCCTGGGCCACACGACAAAG 2294
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2295 CCCCATTTCTACAAAAAAAAATACCAAAAAAAAGCCAGATGTGGTGGCATGCACCTGTAGTTTAAGCTACTTGG 2368
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2369 GAGGATGAAGTGGGAGGACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGTAAACTGAGATCGCGCCACAGAACTC 2442
Query 571 ----------------------------------------------------- 570
Sbjct 2443 CAGTTTGAGCAACAGATCAAGACCCTGCCTGAAAATAAATCAATAAATACACT 2495
