Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08087
- Subject:
- XR_001755170.2
- Aligned Length:
- 2289
- Identities:
- 518
- Gaps:
- 1720
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA 296
Query 1 ------------------------------------------------------------------ATGAATCC 8
||||||||
Sbjct 297 GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC 370
Query 9 ACAGATCAGAAACCCGATGAAGGCAATGTATCCAGGCACATTCTACTTCCAATTTAAAAAC-----------CT 71
||||||||||||.||||||.||...|||||||.||.||||||||||..|.|.|||.||||| ||
Sbjct 371 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 444
Query 72 ATGG-------------------------GAAGCCAA-------------CGATC-----------GGGAC--- 93
|||| ||||..|| ||.|| |||||
Sbjct 445 ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA 518
Query 94 -------------------------------------------------------------------------- 93
Sbjct 519 GGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAA 592
Query 94 -------GAAA------------CTTGG--CTGTG--------CT-----------------------TCACC- 114
|||| ||||| ||||| || |||||
Sbjct 593 CCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCT 666
Query 115 ------------------------------GTG----GAAGGT------AT-----------------AAAG-- 129
||| |||||| || ||.|
Sbjct 667 GGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTC 740
Query 130 ---------------------CGCCGCT-----------------------CAGT---TGTCTCCT-------- 148
||||.|| |.|| || |||||
Sbjct 741 ACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTG-CTCCTCAGGCTGC 813
Query 149 ----------------------------------GGAAGAC-------------GGG----------------- 158
.|||||| |||
Sbjct 814 ATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAAT 887
Query 159 ---CGTC-----TTC------------------------------------------------CGAAA------ 170
.||| ||| |.|||
Sbjct 888 GAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGAT 961
Query 171 --CCAGGTGGATTCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGCGACGACATACTGTC 242
.|||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 962 TCTCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTC 1035
Query 243 TCCTAACACAAAGTACCAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGACTGTGCAGGGGAGGTGGCCG 316
||||||||||||.|||.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1036 TCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGAGGTGGCCG 1109
Query 317 AGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACTACTTCCAGTATCCATGT 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||..|.||.||..|
Sbjct 1110 AGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTACTTCTGGGATACAGAT 1183
Query 391 TACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGTCGCTGTGGAGATCATGGACTATGAAGATTTTAAATA 464
|||||||||||||||.|||||||||||||||||||||.|.|.|||.|||||||||.|||..||||||||..||.
Sbjct 1184 TACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGATTTTGTATC 1257
Query 465 TTGTTGGGAAAACTTTGTGTACAATGATAATGAGCCATTCAAGCCTTGGAAGGGATTAAAAACCAACTTTCGAC 538
|||||||.|||||||||||||||.||||.||||||||||||||||||||||||||.||.|||||||||||||||
Sbjct 1258 TTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCAACTTTCGAC 1331
Query 539 TTCTGAAAAGAAGGCTACGGGAGAGTCTCCAG------------------------------------------ 570
||||||||||||||||||||||||.|||||||
Sbjct 1332 TTCTGAAAAGAAGGCTACGGGAGATTCTCCAGTGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTCTTCTAGCCT 1405
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1406 CCTGCTCATGCTGCACGGGCCTCCCCTCCATCCTGCACCAGCTGTGCTTTTGCCTGGTCATCCTGAGCCCCTCC 1479
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1480 TGGCCTCAGGGCCATTCCATAGTGCCCCCCTGCCTCACCACCTCCTCCCCGCTCTCCCAGGCTCTTCTTGTAGA 1553
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1554 GGCTCTCCATCCACCTCCCCAGTCCTGTTCCCCCAGCCTGGGTGCCCCTAACTTGACTCTTCCCATCTCCCCAG 1627
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1628 CATAACCAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTGTCGCCCAGACTAGAGTGCAAT 1701
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1702 GGCTGGATCTCAGCTCACTGCAAACTCTGCTTACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTCTGAGTAGCT 1775
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1776 GGGATTACAGATGCCTGCCACCACGCCCAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAG 1849
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1850 TGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCATCTCTGTCTCC 1923
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1924 CAAAGTGCTGGGATTACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCTTATTAAACTCAATCTAGTC 1997
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1998 TGGCCCTGGTGACTCACGCCTTTCGGAGGCAGAGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGAGACCAGCCT 2071
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2072 GGGCCACACGACAAAGCCCCATTTCTACAAAAAAAAATACCAAAAAAAAGCCAGATGTGGTGGCATGCACCTGT 2145
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2146 AGTTTAAGCTACTTGGGAGGATGAAGTGGGAGGACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGTAAACTGAGA 2219
Query 571 --------------------------------------------------------------------- 570
Sbjct 2220 TCGCGCCACAGAACTCCAGTTTGAGCAACAGATCAAGACCCTGCCTGAAAATAAATCAATAAATACACT 2288
