Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08124
- Subject:
- NM_001079905.1
- Aligned Length:
- 1705
- Identities:
- 1385
- Gaps:
- 74
Alignment
Query 1 ATGCTGGAACGTCGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGACTCCTTTCTGGGCCCTCCCA 74
||||||||||..||.||||||||||||..|||||||||||..||.||||||.|.|||.||||||||||||||||
Sbjct 1 ATGCTGGAACAGCGCTGCAGGGGCCCCACGGCCATGGGCCCAGCTCAGCCCTGGCTCTTTTCTGGGCCCTCCCA 74
Query 75 GGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAACAAGGCACGTCAGTGGCCCAGTCTGGTG 148
||||||..|||||.|| || |.|.|||.|||||.|.||.||||..||| ||.|||.|..|.|
Sbjct 75 GGAGTCCTCCCAGCCC-----GA-------CAGAGGGTTGAGGTACCAGGGCAAATCA---GCTCAGCCAAGAG 133
Query 149 CCCAAGCCCCAGGCAGGGCCCATCGCTGTGCCCACTGTCGAAGGCACTTCCCTGGCTGGGTGGCTCTGTGGCTT 222
.||||.|||||||||.||.||||||.||||||||||||||.|.||.||||||.|||||||||||.|||||||||
Sbjct 134 GCCAAACCCCAGGCAAGGTCCATCGTTGTGCCCACTGTCGGAAGCGCTTCCCGGGCTGGGTGGCCCTGTGGCTT 207
Query 223 CACACCCGCCGGTGCCAGGCCCGGCTGCCCTTGCCCTGCTCTGAGTGTGGCCGTCGCTTTCGCCATGCCCCCTT 296
||..|.||.||||||||||||||||||||..||||||||..|||.||...||..|||||||||||.||||||||
Sbjct 208 CATGCTCGGCGGTGCCAGGCCCGGCTGCCTCTGCCCTGCCATGAATGCAACCAGCGCTTTCGCCACGCCCCCTT 281
Query 297 CTTAGCACTGCACCGCCAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGCCTGCCACCTCTGTGGGCAGA 370
||||||.|||||.|..|||||.||||||.||||...|||.||||||||.||...|||||||||.||||||||.|
Sbjct 282 CTTAGCGCTGCATCTTCAGGTTCATGCTTCTGCAGTCCCCGACCTGGGTTTCATCTGCCACCTATGTGGGCATA 355
Query 371 GCTTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCTGCAAAGCGGCCCATCGCTTGTCCC 444
||||||||||.|||||.|||||||||||||||||||||||.||.||||||.||||||||||||||.||||.||.
Sbjct 356 GCTTCCGAGGATGGGTAGCCCTGGTTCTGCATCTGCGGGCTCACTCAGCTTCAAAGCGGCCCATCACTTGCCCT 429
Query 445 AAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTTCGAGCTCATCTGCGGCGGTGCCACCCTCCCGCCCCGGA 518
.|||||||.||||||||||||||||.|||.||||||||||||||||||||..|||||||.||.||.|.|||.||
Sbjct 430 GAATGCGACAGACGCTTCTGGCGACAAAAACAGCTTCGAGCTCATCTGCGAAGGTGCCAGCCCCCTGTCCCTGA 503
Query 519 GGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAGTGGGACCAGCTAGTTGCCCACAAGCGGG 592
|||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||||..||||||||||
Sbjct 504 GGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAATGGGACCAACTGGTTGTTCACAAGCGGG 577
Query 593 TGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAAGGCTCTGGGGCCCCGGCCCA-GGGGCCGCCCCGCGGT 665
|||||||.|||||||||.||||||||||.||||||||.||.|||||.||.| ||||| |.||.||.||||
Sbjct 578 TGCACGTGGCTGAGGCCTTGGAGGAGGCAGCAGCCAAAGCCCTGGGTCCTC-GCCCACGAGGACGTCCCG---- 646
Query 666 GACCGCCCCCCGGCCCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTGTTGTGGCAAGCGCTTCCGGC 739
|.||.|||.||||.||||||||.||.||.|||||||||||||||||||||||.||.||||||||.|||||.|
Sbjct 647 --CAGCTCCCAGGCCTGGTGGAGACGCTGTGGACCGCCCCTTCCAGTGTGCCTGCTGCGGCAAGCGTTTCCGCC 718
Query 740 ACAAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCACCAGTGCCCCGAGTGCGGGAAG 813
||||||||||..|||||||.|||||||||||||||||.||.|||||.||.|||||||||||.||||||||||||
Sbjct 719 ACAAGCCCAATCTGATCGCCCACCGCCGCGTGCACACTGGTGAGCGACCACACCAGTGCCCAGAGTGCGGGAAG 792
Query 814 CGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACCCGTGCAAAGA 887
||.||.|||||.||||||||.|||||.||||||||||||||.||.||||||||||||||||||||.||||..||
Sbjct 793 CGTTTCACCAACAAGCCCTACCTGACCTCGCACCGGCGCATACATACCGGCGAGAAGCCCTACCCATGCACCGA 866
Query 888 GTGCGGCCGCCGCTTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATCCGAGGGGTCGG 961
|||.||||||||||||||.|||||||||||||||.||||.||||||||.||.||||||||.|..||||..||.|
Sbjct 867 GTGTGGCCGCCGCTTCCGCCACAAACCCAACCTGTTGTCGCACAGCAAAATCCACAAGCGCTTGGAGGTCTCAG 940
Query 962 CCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGTCCGCGGCCGAGCCCACCCCG 1035
|.|||||.|||||...|||.|.|||.|.||||.| .||.||.|||||.|
Sbjct 941 CGCAGGCTGCCCCACACCCCGAGAGTCACCAGAT---------------------TGCAGCAGAGCCTA----- 988
Query 1036 GCGGTACCTCTGAAACCGGCCCAGGAGCCGCCGCCAGGGG-CCCCGCCAGAGCACCCGCAGGACCCGATCGAAG 1108
.||.|| ||||.||.|..|.|..||| ||.|||| |||||| ||||||.|.|..||
Sbjct 989 -TGGCAC------AACCTGCACTTGGGGTGCC-CCTGGGGTCCCCGC-------------GGACCCCAGCTGAG 1041
Query 1109 CCCCC--CCCTCCCTCTACAGCTGCGACGACTGCGGCAGGAGCTTCCGGCTGGAGCGCTTCCTGCGGGCCCACC 1180
.|.|| |.|| |||..|.||||||..||||||||||.|.|||||||||||||||||||||||||||...||||
Sbjct 1042 GCACCTGCGCT-CCTGCATAGCTGCTCCGACTGCGGCCGCAGCTTCCGGCTGGAGCGCTTCCTGCGGCTACACC 1114
Query 1181 AGCGGCAGCACACCGGGGAGCGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACTTCGGCAAGAAGACGCACCTG 1254
||.||||||||||.||||||.||||||||.|||||.|.|||||.||.|||||||||||||||||||||||||||
Sbjct 1115 AGAGGCAGCACACAGGGGAGAGGCCCTTCGCCTGCACAGAGTGTGGCAAGAACTTCGGCAAGAAGACGCACCTG 1188
Query 1255 GTGGCGCACTCGCGCGTGCACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGCGGCCGCCGCTTCTCCCAGGG 1328
|||||||||||.|||||||||||||||||.||.||||||||||||||||||||.||.|||||.|||||.|||||
Sbjct 1189 GTGGCGCACTCACGCGTGCACTCCGGCGAACGTCCCTTCGCCTGCGAGGAGTGTGGTCGCCGTTTCTCACAGGG 1262
Query 1329 CAGCCATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTGTGTCCCGACTGCGGCAAGGCCT 1402
||||||.|||||.||.||.|||||.|||||.||.||.||..|||||||||||||.||.||||||||||||||.|
Sbjct 1263 CAGCCACCTGGCAGCCCACCGGCGAGACCATGCACCAGAGAGGCCCTTCGTGTGCCCGGACTGCGGCAAGGCTT 1336
Query 1403 TCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACGTCTGCCCCGACTGC 1476
||||||||||.|||||||||||.||||||||.|||||||||||.||||||||.|||||.||.||.||||||||.
Sbjct 1337 TCCGCCACAAGCCCTACCTGGCTGCGCACCGACGCATCCACACAGGCGAGAAACCCTATGTGTGTCCCGACTGT 1410
Query 1477 GGCAAAGCCTTCAGCCAGAAGTCCAACCTGGTGTCGCACCGGCGCATCCACACGGGCGAGCGGCCCTACGCCTG 1550
||||||||.|||||.||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 1411 GGCAAAGCTTTCAGTCAGAAGTCCAACCTGGTGTCCCACCGGCGCATCCACACAGGCGAGCGGCCCTACGCCTG 1484
Query 1551 TCCCGACTGCGACCGCAGCTTCAGCCAGAAGTCCAACCTCATCACCCACCGCAAGAGCCACATCCGGGACGGCG 1624
.||||||||.||.||.||||||||.|||||||||||.||.|||||.|||||.|||||||||||||||||.||||
Sbjct 1485 CCCCGACTGTGATCGTAGCTTCAGTCAGAAGTCCAATCTTATCACACACCGGAAGAGCCACATCCGGGATGGCG 1558
Query 1625 CCTTCTGCTGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGGCCCACCAGAAGAAGCACGAT 1698
|||||||.|||||||||||||||||||||||.||.||||||||..|||||.||...||||||||||||||.|||
Sbjct 1559 CCTTCTGTTGTGCCATCTGTGGCCAGACCTTTGATGACGAGGACCGACTCTTGATGCACCAGAAGAAGCATGAT 1632
Query 1699 GTC 1701
|.|
Sbjct 1633 GCC 1635