Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08154
- Subject:
- NM_001282045.1
- Aligned Length:
- 1372
- Identities:
- 664
- Gaps:
- 644
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATCTAGGCAGTGACGCCGGCAGCAGCAGCAGCAGCCGCGCCAGCTCACAATCCAACTCCACCAAAGTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTTGCTCCGAGTGCAAATCCTCATCGTCGCCGGGGGGTAGCTTGGACTTGGTGTCTGCTCTGGAAGACTATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGAGCCCTTCCCGGTCTACCAGAAGAAGGTGATTGATGAGTGGGCTCCGGAGGAGGACGGGGAGGAGGAGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAGGACGATCGAGGGTATCGGGATGACGGCTGTCCGGCCCGGGAGCCGGGGGACGTGAGCGCCAGGATCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGCAGCGGCAGCGGGAGCAGGAGCGCCGCCACCACCATGCCGTCCCCGATGCCTAACGGCAACCTCCATCCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGACCCTCAAGACCTCAGGCACAATGGCAACGTGGTGGTAGCTGGCCGGCCGAACGCCTCTCGGGTTCCCCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGACCCATCCAGAAGACCCAGCCTCCAGGGAGCCGGCGCGGAGGCCGAAACCGGGCATCTGGGGGCCTCTGCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAGCCACCGGACGGCGGGACGCGGGTCCCGGAAGAACCCCCTGCGCCCCCAATGGACTGGGAGGCATTGGAAA 592
Query 1 ---------------------------------ATGGT---ACATCAGGAT------------AACTGCTCGTA 26
| ||| |.|.||||.| ||||.|.|.|.
Sbjct 593 AGCATCTGGCCGGGCTGCAGTTCCGGGAGCAGGA-GGTGCGAAACCAGGGTCAGGCGAGGACCAACTCCACCTC 665
Query 27 TCAGGCACAGAAAAATGAGAGAGAGTCTATCAGACAGAAGTTGGCACTTGGAAGCTTCTTTGATGATGGCCCAG 100
| ||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct 666 T---GCACAGAAGAATGAGAGAGAGTCTATCAGACAGAAGTTGGCACTCGGAAGCTTCTTTGACGATGGCCCAG 736
Query 101 GAATTTATACCAGCTGTAGCAAAAGTGGGAAGCCAAGCCTTTCCTCCCGACTGCAGAGTGGGATGAACTTGCAG 174
||||.|||||||||||.||||||||||||||||||||||||||..|..||||.|||||.|||||||||.|.|||
Sbjct 737 GAATCTATACCAGCTGCAGCAAAAGTGGGAAGCCAAGCCTTTCTGCAAGACTACAGAGCGGGATGAACCTCCAG 810
Query 175 ATATGCTTTGTCAACGACAGTGGCAGTGATAAGGACAGTGATGCTGATGACAGTAAGACTGAAACCAGCTTGGA 248
||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||||||||.||||||||||||||
Sbjct 811 ATATGCTTTGTCAATGACAGCGGCAGTGACAAGGACAGCGATGCAGATGACAGTAAGACGGAAACCAGCTTGGA 884
Query 249 CACCCCCTTGTCTCCCATGAGCAAACAGAGTTCTTCCTATTCTGATAGAGACACTACTGAAGAGGAGTCTGAAT 322
|||.||||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||||
Sbjct 885 CACGCCCTTGTCCCCCATGAGCAAGCAGAGTTCTTCCTATTCGGATAGAGACACAACTGAGGAGGAGTCTGAAT 958
Query 323 CCTTGGATGACATGGACTTCCTTACAAGGCAAAAGAAATTGCAAGCTGAAGCCAAAATGGCCCTTGCCATGGCC 396
||.|||||||||||||||||||.||||||||||||||..|.||||||||||||||||||||.||.|||||||||
Sbjct 959 CCCTGGATGACATGGACTTCCTCACAAGGCAAAAGAAGCTACAAGCTGAAGCCAAAATGGCTCTGGCCATGGCC 1032
Query 397 AAACCAATGGCCAAAATGCAAGTAGAAGTGGAGAAACAGAACAGGAAAAAGTCTCCCGTCGCTGATCTTCTGCC 470
||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||
Sbjct 1033 AAACCAATGGCCAAAATGCAAGTAGAAGTGGAAAAACAGAACAGGAAAAAGTCTCCCGTCGCTGATCTTCTCCC 1106
Query 471 ACACATGCCTCATATAAGTGAATGCTTGATGAAAAGAAGTTTAAAACCCACCGACCTGAGAGACATGACTATTG 544
||||||||||||.|||||.|||||.||||||||||||||.|||||.||||||||||||||||||||||||||.|
Sbjct 1107 ACACATGCCTCACATAAGCGAATGTTTGATGAAAAGAAGCTTAAAGCCCACCGACCTGAGAGACATGACTATCG 1180
Query 545 GGCAGCTACAAGTGATAGTCAATGATCTCCATTCCCAGATAGAAAGCTTGAATGAAGAGTTGGTCCAGCTGCTT 618
||||||||||||||||.||||||||.|||||.||||||||.|||||.||||||||||||||||||||||||||.
Sbjct 1181 GGCAGCTACAAGTGATCGTCAATGACCTCCACTCCCAGATTGAAAGTTTGAATGAAGAGTTGGTCCAGCTGCTC 1254
Query 619 CTCATCCGAGATGAGCTGCACACAGAGCAGGATGCCATGCTGGTGGACATTGAAGACTTGACCAGACATGCTGA 692
||.||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||.|||||
Sbjct 1255 CTTATTCGAGATGAGCTGCACACAGAACAAGATGCCATGCTGGTGGACATTGAAGACTTGACTAGACACGCTGA 1328
Query 693 AAGTCAGCAGAAGCACATGGTAGAGAAAATGCCTGCAAAG 732
.|||||||||||||||||||..|||||||||||.||.|||
Sbjct 1329 GAGTCAGCAGAAGCACATGGCTGAGAAAATGCCCGCGAAG 1368