Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08160
- Subject:
- NM_001135728.2
- Aligned Length:
- 1995
- Identities:
- 1150
- Gaps:
- 714
Alignment
Query 1 ATGGTGGAGGCCATAGTGGAGTTTGACTACCAGGCCCAGCACGATGATGAGCTGACGATCAGCGTGGGTGAAAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCACCAACATCAGGAAGGAGGATGGAGGCTGGTGGGAGGGACAGATCAACGGCAGGAGAGGTTTGTTCCCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACAACTTTGTAAGAGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CACGAAGTGCCCAGTGGAAACTCTTTGCTGTCTTCTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCGACG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAGCTGAAAGTTGGCGACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCATAGAGGTGGTAGGAGAGGTAGAGGAAGGATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAATGTTTCCT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAGTTTAAGGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATTTTCAAAGACAAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CCAATCAAACTAAGACCAAGGTCAATTGAAGTAGAAAATGACTTTCTGCCGGTAGAAAAGACTATTGGGAAGAA 740
|| ||.||||.||||.|||||||||||
Sbjct 1 -------------------------------------AT-----------GGGAGAAGAGACAATTGGGAAGAA 26
Query 741 GTTACCTGCAACTACAGCAACTCCAGACTCATCAAAAACAGAAATGGACAGCAGGACAAAGAGCAAGGATTACT 814
|||||||.||.|||||.|||||||||||.||||.||.||.||.|||||||||||||||||||.|||||||||||
Sbjct 27 GTTACCTCCAGCTACATCAACTCCAGACCCATCGAAGACGGAGATGGACAGCAGGACAAAGACCAAGGATTACT 100
Query 815 GCAAAGTAATATTTCCATATGAGGCACAGAATGATGATGAATTGACAATCAAAGAAGGAGATATAGTCACTCTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||
Sbjct 101 GCAAAGTAATATTTCCATATGAGGCACAGAATGATGATGAATTGACAATCAAGGAAGGAGATATAGTGACTCTC 174
Query 889 ATCAATAAGGACTGCATCGACGTAGGCTGGTGGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCCCCGATAA 962
|||||||||||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||.||.||.||
Sbjct 175 ATCAATAAGGACTGCATCGACGTAGGCTGGTGGGAAGGAGAACTCAATGGCAGACGAGGCGTGTTTCCTGACAA 248
Query 963 CTTCGTGAAGTTACTTCCACCGGACTTTGAAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCTC 1036
|||||||||||||||||||.||||||||||.|||||||||||||||||||||||.||.||.||||||||.||||
Sbjct 249 CTTCGTGAAGTTACTTCCATCGGACTTTGACAAGGAAGGGAATAGACCCAAGAAACCGCCACCTCCATCAGCTC 322
Query 1037 CTGTCATCAAACAAGGGGCAGGCACCACTGAGAGAAAACATGAAATTAAAAAGATACCTCCTGAAAGACCAGAA 1110
|||||.||||||||||||||||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 323 CTGTCGTCAAACAAGGGGCAGGTACCACAGAGAGAAAACATGAAATTAAAAAAATACCTCCTGAAAGACCAGAA 396
Query 1111 ATGCTTCCAAACAGAACAGAAGAAAAAGAAAGACCAGAGAGAGAGCCAAAACTGGATTTACAGAAGCCCTCCGT 1184
|..||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||.||
Sbjct 397 ACCCTTCCAAACAGAACAGAAGAGAAAGAAAGACCAGAGAGAGAGCCAAAACTGGATTTACAGAAGCCTTCAGT 470
Query 1185 TCCTGCCATACCGCCAAAAAAGCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACCTGGCGCACTGCCCCCGA 1258
|||||||||.||.|||||||||||||||||||||||||||||||||||.|.|||||||||.|||.|||||||.|
Sbjct 471 TCCTGCCATCCCACCAAAAAAGCCTCGGCCACCTAAGACCAATTCTCTGAACAGACCTGGTGCATTGCCCCCAA 544
Query 1259 GAAGGCCGGAGAGACCGGTGGGTCCGCTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCGGCAGT 1332
||||.||.|||.||||.|||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||.
Sbjct 545 GAAGACCTGAGCGACCAGTGGGCCCACTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCAGGCAGC 618
Query 1333 TCGCTATCTGGCATCCTGGACAAAGATCTCTCGGACCGCAGCAATGACATTGACTTAGAAGGTTTTGACTCCGT 1406
.|.||.||||||||||||||.||.||.|||||.||||||||||||||.|||||||||||||||||||||||.||
Sbjct 619 GCACTCTCTGGCATCCTGGATAAGGACCTCTCAGACCGCAGCAATGATATTGACTTAGAAGGTTTTGACTCTGT 692
Query 1407 GGTATCATCTACTGAGAAACTCAGTCATCCGACCACAAGCAGACCAAAAGCTACAGGGAGGCGGCCTCCGTCCC 1480
|.||||||||||||||||||||||.||.||.||||||||||||||||||||||||||.||.||||||||.||||
Sbjct 693 GATATCATCTACTGAGAAACTCAGCCACCCAACCACAAGCAGACCAAAAGCTACAGGAAGACGGCCTCCATCCC 766
Query 1481 AGTCCCTCACATCTTCATCCCTTTCAAGCCCTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATAAGGAGGAA 1554
||||.|||||||||||.||||||||||||||.||||||||.||||||||||||||||||||.|||||.||||||
Sbjct 767 AGTCACTCACATCTTCTTCCCTTTCAAGCCCCGATATCTTTGACTCCCCAAGTCCCGAAGAAGATAAAGAGGAA 840
Query 1555 CACATTTCACTTGCGCACAGAGGAGTGGACGCGTCAAAGAAAACTTCCAAGACTGTTACCATATCCCAAGTGTC 1628
||||||||.|||||||||||||||.|.||||.|||||||||.||||||||||||||||||||||||||||||||
Sbjct 841 CACATTTCGCTTGCGCACAGAGGAATAGACGTGTCAAAGAAGACTTCCAAGACTGTTACCATATCCCAAGTGTC 914
Query 1629 TGACAACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAGCCCCTCTGTCCT 1702
|||.|||||..||||||||||.||||||||.||||||||||||||.|...||.||||||||||..||||.||.|
Sbjct 915 TGATAACAAGACATCCCTGCCACCCAAGCCAGGGACCATGGCAGCTGCCAGCAGTGGGCCAGCTTCTCTCTCTT 988
Query 1703 CAGCGGTGCCCTCCCCCCTGTCATCCTCTTTGGGAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGTTCGGC 1776
|||.||...||||.|||.||||||||||||||||||||||||||||.|||||||..||.||.|||||||||.||
Sbjct 989 CAGTGGCATCCTCACCCATGTCATCCTCTTTGGGAACAGCTGGACAGAGAGCCAGTTCTCCATCTCTGTTCAGC 1062
Query 1777 ACGGAAGGAAAACCAAAGATGGAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGAGCTAAGGACACAGGTCCG 1850
||.||||||||.||||||||||||||.||.|..|||||||||||.||..|.||||||||.|.||..||.|||||
Sbjct 1063 ACAGAAGGAAAGCCAAAGATGGAGCCAGCAGTGAGCAGCCAGGCTGCTATCGAGGAGCTTAAGATGCAAGTCCG 1136
Query 1851 CGAGCTGAGGAGCATCATCGAGACCATGAAGGACCAGCAGAAACGAGAGATTAAACAGTTATTGTCTGAGTTGG 1924
.||||||||||.||||||.||||||||||||||||||||||||||.||||||||.||||||.||||.||.||||
Sbjct 1137 TGAGCTGAGGACCATCATTGAGACCATGAAGGACCAGCAGAAACGTGAGATTAAGCAGTTACTGTCAGAATTGG 1210
Query 1925 ATGAAGAGAAGAAAATCCGGCTTCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTACAATCAAAA 1995
||||||||||.||.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||.
Sbjct 1211 ATGAAGAGAAAAAGATCCGGCTCCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTTCAATCAAAG 1281
