Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08160
- Subject:
- XM_011247851.2
- Aligned Length:
- 1996
- Identities:
- 661
- Gaps:
- 1238
Alignment
Query 1 ATGGTGGAGGCCATAGTGGAGTTTGACTACCAGGCCCAGCACGATGATGAGCTGACGATCAGCGTGGGTGAAAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCACCAACATCAGGAAGGAGGATGGAGGCTGGTGGGAGGGACAGATCAACGGCAGGAGAGGTTTGTTCCCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACAACTTTGTAAGAGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CACGAAGTGCCCAGTGGAAACTCTTTGCTGTCTTCTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCGACG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAGCTGAAAGTTGGCGACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCATAGAGGTGGTAGGAGAGGTAGAGGAAGGATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAATGTTTCCT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAGTTTAAGGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATTTTCAAAGACAAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CCAATCAAACTAAGACCAAGGTCAATTGAAGTAGAAAATGACTTTCTGCCGGTAGAAAAGACTATTGGGAAGAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GTTACCTGCAACTACAGCAACTCCAGACTCATCAAAAACAGAAATGGACAGCAGGACAAAGAGCAAGGATTACT 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GCAAAGTAATATTTCCATATGAGGCACAGAATGATGATGAATTGACAATCAAAGAAGGAGATATAGTCACTCTC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ATCAATAAGGACTGCATCGACGTAGGCTGGTGGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCCCCGATAA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CTTCGTGAAGTTACTTCCACCGGACTTTGAAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCTC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CTGTCATCAAACAAGGGGCAGGCACCACTGAGAGAAAACATGAAATTAAAAAGATACCTCCTGAAAGACCAGAA 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 ATGCTTCCAAACAGAACAGAAGAAAAAGAAAGACCAGAGAGAGAGCCAAAACTGGATTTACAGAAGCCCTCCGT 1184
|||.||||...||||| ||.|||| .||.|||||.|
Sbjct 1 ATGTTTCCCTTCAGAA-----------------------AGGGAGC-----------------TAGACCTCCAT 34
Query 1185 TCCTGCCATACCGCCAAAAAAGCCTCGGCCACCTAAGACCAAT-TCTCTCAGCAGACCTGGCGCACTGCCCCCG 1257
.|.|| ||| |.|.||.|||||||||
Sbjct 35 CCATG-----------------------------------AATCTGTTTCGGCAGACCTG-------------- 59
Query 1258 AGAAGGCCGGAGAGACCGGTGGGTCCGCTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCGGCAG 1331
|.||||||||||||||||||||||||||||.|||||
Sbjct 60 --------------------------------------CTGGGGTGACAGTCCAAAGATTGACTTGGCAGGCAG 95
Query 1332 TTCGCTATCTGGCATCCTGGACAAAGATCTCTCGGACCGCAGCAATGACATTGACTTAGAAGGTTTTGACTCCG 1405
..|.||.||||||||||||||.||.||.|||||.||||||||||||||.|||||||||||||||||||||||.|
Sbjct 96 CGCACTCTCTGGCATCCTGGATAAGGACCTCTCAGACCGCAGCAATGATATTGACTTAGAAGGTTTTGACTCTG 169
Query 1406 TGGTATCATCTACTGAGAAACTCAGTCATCCGACCACAAGCAGACCAAAAGCTACAGGGAGGCGGCCTCCGTCC 1479
||.||||||||||||||||||||||.||.||.||||||||||||||||||||||||||.||.||||||||.|||
Sbjct 170 TGATATCATCTACTGAGAAACTCAGCCACCCAACCACAAGCAGACCAAAAGCTACAGGAAGACGGCCTCCATCC 243
Query 1480 CAGTCCCTCACATCTTCATCCCTTTCAAGCCCTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATAAGGAGGA 1553
|||||.|||||||||||.||||||||||||||.||||||||.||||||||||||||||||||.|||||.|||||
Sbjct 244 CAGTCACTCACATCTTCTTCCCTTTCAAGCCCCGATATCTTTGACTCCCCAAGTCCCGAAGAAGATAAAGAGGA 317
Query 1554 ACACATTTCACTTGCGCACAGAGGAGTGGACGCGTCAAAGAAAACTTCCAAGACTGTTACCATATCCCAAGTGT 1627
|||||||||.|||||||||||||||.|.||||.|||||||||.|||||||||||||||||||||||||||||||
Sbjct 318 ACACATTTCGCTTGCGCACAGAGGAATAGACGTGTCAAAGAAGACTTCCAAGACTGTTACCATATCCCAAGTGT 391
Query 1628 CTGACAACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAGCCCCTCTGTCC 1701
||||.|||||..||||||||||.||||||||.||||||||||||||.|...||.||||||||||..||||.||.
Sbjct 392 CTGATAACAAGACATCCCTGCCACCCAAGCCAGGGACCATGGCAGCTGCCAGCAGTGGGCCAGCTTCTCTCTCT 465
Query 1702 TCAGCGGTGCCCTCCCCCCTGTCATCCTCTTTGGGAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGTTCGG 1775
||||.||...||||.|||.||||||||||||||||||||||||||||.|||||||..||.||.|||||||||.|
Sbjct 466 TCAGTGGCATCCTCACCCATGTCATCCTCTTTGGGAACAGCTGGACAGAGAGCCAGTTCTCCATCTCTGTTCAG 539
Query 1776 CACGGAAGGAAAACCAAAGATGGAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGAGCTAAGGACACAGGTCC 1849
|||.||||||||.||||||||||||||.||.|..|||||||||||.||..|.||||||||.|.||..||.||||
Sbjct 540 CACAGAAGGAAAGCCAAAGATGGAGCCAGCAGTGAGCAGCCAGGCTGCTATCGAGGAGCTTAAGATGCAAGTCC 613
Query 1850 GCGAGCTGAGGAGCATCATCGAGACCATGAAGGACCAGCAGAAACGAGAGATTAAACAGTTATTGTCTGAGTTG 1923
|.||||||||||.||||||.||||||||||||||||||||||||||.||||||||.||||||.||||.||.|||
Sbjct 614 GTGAGCTGAGGACCATCATTGAGACCATGAAGGACCAGCAGAAACGTGAGATTAAGCAGTTACTGTCAGAATTG 687
Query 1924 GATGAAGAGAAGAAAATCCGGCTTCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTACAATCAAAA 1995
|||||||||||.||.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||.
Sbjct 688 GATGAAGAGAAAAAGATCCGGCTCCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTTCAATCAAAG 759
