Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08160
- Subject:
- XM_017318586.1
- Aligned Length:
- 2122
- Identities:
- 1424
- Gaps:
- 548
Alignment
Query 1 ATGGTGGAGGCCATAGTGGAGTTTGACTACCAGGCCCAGCACGATGATGAGCTGACGATCAGCGTGGGTGAAAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCACCAACATCAGGAAGGAGGATGGAGGCTGGTGGGAGGGACAGATCAACGGCAGGAGAGGTTTGTTCCCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACAACTTTGTAAGAGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CACGAAGTGCCCAGTGGAAACTCTTTGCTGTCTTCTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCGACG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAGCTGAAAGTTGGCGACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCATAGAGGTGGTAGGAGAGGTAGAGGAAGGATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAATGTTTCCT 444
|.|||||||||||||||||||||
Sbjct 1 ---------------------------------------------------ATGGGAAGACTGGAATGTTTCCT 23
Query 445 TCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTC 518
|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||
Sbjct 24 TCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATCTCCCAGGATGAGCAGCTTTCCAAGTC 97
Query 519 A------------------------------------------------------------------------- 519
|
Sbjct 98 AAGGCCTGAAGGTTTCCTTCCAGCTTCTCTGCTGCCCTTTCCAGCTCATGGAGCAAAAGACTACCTTTGAAGGG 171
Query 520 ------------------------------------------------------AGTTTAAGGGAAACCACAGG 539
||.|||||.|||||||||||
Sbjct 172 ACAATTCTGTACCGAGCCGCACCGGGAAAGACGGAGGGCCACAGACGCTATTACAGCTTAAGAGAAACCACAGG 245
Query 540 CTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAA 613
|||||||||||||||.||.|||||.|||||.||||||||.|||||||||||||||||..|||||||||||||.|
Sbjct 246 CTCCGAGAGTGATGGAGGCGACTCCAGCAGTACCAAGTCCGAAGGTGCCAACGGGACCATGGCAACTGCAGCCA 319
Query 614 TCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATTTTCAAAGACAAGCCAATCAAACTAAGACCAAGG 687
|||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 320 TCCAGCCCAAGAAAGTTAAAGGAGTGGGGTTTGGAGACATTTTCAAAGACAAGCCAATTAAACTAAGACCAAGG 393
Query 688 TCAATTGAAGTAGAAAATGACTTTCTGCCGGTAGAAAAGACTATTGGGAAGAAGTTACCTGCAACTACAGCAAC 761
||.||||||||.|||||||||||.|||||.||.||||||||.||||||||||||||||||.||.|||||.||||
Sbjct 394 TCGATTGAAGTGGAAAATGACTTCCTGCCCGTCGAAAAGACAATTGGGAAGAAGTTACCTCCAGCTACATCAAC 467
Query 762 TCCAGACTCATCAAAAACAGAAATGGACAGCAGGACAAAGAGCAAGGATTACTGCAAAGTAATATTTCCATATG 835
|||||||.||||.||.||.||.|||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 468 TCCAGACCCATCGAAGACGGAGATGGACAGCAGGACAAAGACCAAGGATTACTGCAAAGTAATATTTCCATATG 541
Query 836 AGGCACAGAATGATGATGAATTGACAATCAAAGAAGGAGATATAGTCACTCTCATCAATAAGGACTGCATCGAC 909
|||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 542 AGGCACAGAATGATGATGAATTGACAATCAAGGAAGGAGATATAGTGACTCTCATCAATAAGGACTGCATCGAC 615
Query 910 GTAGGCTGGTGGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCCCCGATAACTTCGTGAAGTTACTTCCACC 983
||||||||||||||||||||.||.||.|||||||||||||||||.||.||.|||||||||||||||||||||.|
Sbjct 616 GTAGGCTGGTGGGAAGGAGAACTCAATGGCAGACGAGGCGTGTTTCCTGACAACTTCGTGAAGTTACTTCCATC 689
Query 984 GGACTTTGAAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATCAAACAAGGGGCAG 1057
|||||||||.|||||||||||||||||||||||.||.||.||||||||.|||||||||.|||||||||||||||
Sbjct 690 GGACTTTGACAAGGAAGGGAATAGACCCAAGAAACCGCCACCTCCATCAGCTCCTGTCGTCAAACAAGGGGCAG 763
Query 1058 GCACCACTGAGAGAAAACATGAAATTAAAAAGATACCTCCTGAAAGACCAGAAATGCTTCCAAACAGAACAGAA 1131
|.|||||.|||||||||||||||||||||||.||||||||||||||||||||||..||||||||||||||||||
Sbjct 764 GTACCACAGAGAGAAAACATGAAATTAAAAAAATACCTCCTGAAAGACCAGAAACCCTTCCAAACAGAACAGAA 837
Query 1132 GAAAAAGAAAGACCAGAGAGAGAGCCAAAACTGGATTTACAGAAGCCCTCCGTTCCTGCCATACCGCCAAAAAA 1205
||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.||||||||
Sbjct 838 GAGAAAGAAAGACCAGAGAGAGAGCCAAAACTGGATTTACAGAAGCCTTCAGTTCCTGCCATCCCACCAAAAAA 911
Query 1206 GCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGGCCGGAGAGACCGGTGG 1279
|||||||||||||||||||||||||||.|.|||||||||.|||.|||||||.|||||.||.|||.||||.||||
Sbjct 912 GCCTCGGCCACCTAAGACCAATTCTCTGAACAGACCTGGTGCATTGCCCCCAAGAAGACCTGAGCGACCAGTGG 985
Query 1280 GTCCGCTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCCTGGAC 1353
|.||.|||||||||||||||||||||||||||||||||||||||||.|||||..|.||.||||||||||||||.
Sbjct 986 GCCCACTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCAGGCAGCGCACTCTCTGGCATCCTGGAT 1059
Query 1354 AAAGATCTCTCGGACCGCAGCAATGACATTGACTTAGAAGGTTTTGACTCCGTGGTATCATCTACTGAGAAACT 1427
||.||.|||||.||||||||||||||.|||||||||||||||||||||||.|||.|||||||||||||||||||
Sbjct 1060 AAGGACCTCTCAGACCGCAGCAATGATATTGACTTAGAAGGTTTTGACTCTGTGATATCATCTACTGAGAAACT 1133
Query 1428 CAGTCATCCGACCACAAGCAGACCAAAAGCTACAGGGAGGCGGCCTCCGTCCCAGTCCCTCACATCTTCATCCC 1501
|||.||.||.||||||||||||||||||||||||||.||.||||||||.||||||||.|||||||||||.||||
Sbjct 1134 CAGCCACCCAACCACAAGCAGACCAAAAGCTACAGGAAGACGGCCTCCATCCCAGTCACTCACATCTTCTTCCC 1207
Query 1502 TTTCAAGCCCTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATAAGGAGGAACACATTTCACTTGCGCACAGA 1575
||||||||||.||||||||.||||||||||||||||||||.|||||.||||||||||||||.||||||||||||
Sbjct 1208 TTTCAAGCCCCGATATCTTTGACTCCCCAAGTCCCGAAGAAGATAAAGAGGAACACATTTCGCTTGCGCACAGA 1281
Query 1576 GGAGTGGACGCGTCAAAGAAAACTTCCAAGACTGTTACCATATCCCAAGTGTCTGACAACAAAGCATCCCTGCC 1649
|||.|.||||.|||||||||.|||||||||||||||||||||||||||||||||||.|||||..||||||||||
Sbjct 1282 GGAATAGACGTGTCAAAGAAGACTTCCAAGACTGTTACCATATCCCAAGTGTCTGATAACAAGACATCCCTGCC 1355
Query 1650 GCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAGCCCCTCTGTCCTCAGCGGTGCCCTCCCCCCTGT 1723
.||||||||.||||||||||||||.|...||.||||||||||..||||.||.||||.||...||||.|||.|||
Sbjct 1356 ACCCAAGCCAGGGACCATGGCAGCTGCCAGCAGTGGGCCAGCTTCTCTCTCTTCAGTGGCATCCTCACCCATGT 1429
Query 1724 CATCCTCTTTGGGAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAAAGATG 1797
|||||||||||||||||||||||||.|||||||..||.||.|||||||||.||||.||||||||.|||||||||
Sbjct 1430 CATCCTCTTTGGGAACAGCTGGACAGAGAGCCAGTTCTCCATCTCTGTTCAGCACAGAAGGAAAGCCAAAGATG 1503
Query 1798 GAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGAGCTAAGGACACAGGTCCGCGAGCTGAGGAGCATCATCGA 1871
|||||.||.|..|||||||||||.||..|.||||||||.|.||..||.|||||.||||||||||.||||||.||
Sbjct 1504 GAGCCAGCAGTGAGCAGCCAGGCTGCTATCGAGGAGCTTAAGATGCAAGTCCGTGAGCTGAGGACCATCATTGA 1577
Query 1872 GACCATGAAGGACCAGCAGAAACGAGAGATTAAACAGTTATTGTCTGAGTTGGATGAAGAGAAGAAAATCCGGC 1945
||||||||||||||||||||||||.||||||||.||||||.||||.||.||||||||||||||.||.|||||||
Sbjct 1578 GACCATGAAGGACCAGCAGAAACGTGAGATTAAGCAGTTACTGTCAGAATTGGATGAAGAGAAAAAGATCCGGC 1651
Query 1946 TTCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTACAATCAAAA 1995
|.||||||||||||||||||||||||||||||||||||||.||||||||.
Sbjct 1652 TCCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTTCAATCAAAG 1701
