Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08160
Subject:
XM_017318586.1
Aligned Length:
2122
Identities:
1424
Gaps:
548

Alignment

Query    1  ATGGTGGAGGCCATAGTGGAGTTTGACTACCAGGCCCAGCACGATGATGAGCTGACGATCAGCGTGGGTGAAAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CATCACCAACATCAGGAAGGAGGATGGAGGCTGGTGGGAGGGACAGATCAACGGCAGGAGAGGTTTGTTCCCTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACAACTTTGTAAGAGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CACGAAGTGCCCAGTGGAAACTCTTTGCTGTCTTCTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCGACG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAGCTGAAAGTTGGCGACA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCATAGAGGTGGTAGGAGAGGTAGAGGAAGGATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAATGTTTCCT  444
                                                               |.|||||||||||||||||||||
Sbjct    1  ---------------------------------------------------ATGGGAAGACTGGAATGTTTCCT  23

Query  445  TCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTC  518
            |||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||
Sbjct   24  TCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATCTCCCAGGATGAGCAGCTTTCCAAGTC  97

Query  519  A-------------------------------------------------------------------------  519
            |                                                                         
Sbjct   98  AAGGCCTGAAGGTTTCCTTCCAGCTTCTCTGCTGCCCTTTCCAGCTCATGGAGCAAAAGACTACCTTTGAAGGG  171

Query  520  ------------------------------------------------------AGTTTAAGGGAAACCACAGG  539
                                                                  ||.|||||.|||||||||||
Sbjct  172  ACAATTCTGTACCGAGCCGCACCGGGAAAGACGGAGGGCCACAGACGCTATTACAGCTTAAGAGAAACCACAGG  245

Query  540  CTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAA  613
            |||||||||||||||.||.|||||.|||||.||||||||.|||||||||||||||||..|||||||||||||.|
Sbjct  246  CTCCGAGAGTGATGGAGGCGACTCCAGCAGTACCAAGTCCGAAGGTGCCAACGGGACCATGGCAACTGCAGCCA  319

Query  614  TCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATTTTCAAAGACAAGCCAATCAAACTAAGACCAAGG  687
            |||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  320  TCCAGCCCAAGAAAGTTAAAGGAGTGGGGTTTGGAGACATTTTCAAAGACAAGCCAATTAAACTAAGACCAAGG  393

Query  688  TCAATTGAAGTAGAAAATGACTTTCTGCCGGTAGAAAAGACTATTGGGAAGAAGTTACCTGCAACTACAGCAAC  761
            ||.||||||||.|||||||||||.|||||.||.||||||||.||||||||||||||||||.||.|||||.||||
Sbjct  394  TCGATTGAAGTGGAAAATGACTTCCTGCCCGTCGAAAAGACAATTGGGAAGAAGTTACCTCCAGCTACATCAAC  467

Query  762  TCCAGACTCATCAAAAACAGAAATGGACAGCAGGACAAAGAGCAAGGATTACTGCAAAGTAATATTTCCATATG  835
            |||||||.||||.||.||.||.|||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  468  TCCAGACCCATCGAAGACGGAGATGGACAGCAGGACAAAGACCAAGGATTACTGCAAAGTAATATTTCCATATG  541

Query  836  AGGCACAGAATGATGATGAATTGACAATCAAAGAAGGAGATATAGTCACTCTCATCAATAAGGACTGCATCGAC  909
            |||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct  542  AGGCACAGAATGATGATGAATTGACAATCAAGGAAGGAGATATAGTGACTCTCATCAATAAGGACTGCATCGAC  615

Query  910  GTAGGCTGGTGGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCCCCGATAACTTCGTGAAGTTACTTCCACC  983
            ||||||||||||||||||||.||.||.|||||||||||||||||.||.||.|||||||||||||||||||||.|
Sbjct  616  GTAGGCTGGTGGGAAGGAGAACTCAATGGCAGACGAGGCGTGTTTCCTGACAACTTCGTGAAGTTACTTCCATC  689

Query  984  GGACTTTGAAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATCAAACAAGGGGCAG  1057
            |||||||||.|||||||||||||||||||||||.||.||.||||||||.|||||||||.|||||||||||||||
Sbjct  690  GGACTTTGACAAGGAAGGGAATAGACCCAAGAAACCGCCACCTCCATCAGCTCCTGTCGTCAAACAAGGGGCAG  763

Query 1058  GCACCACTGAGAGAAAACATGAAATTAAAAAGATACCTCCTGAAAGACCAGAAATGCTTCCAAACAGAACAGAA  1131
            |.|||||.|||||||||||||||||||||||.||||||||||||||||||||||..||||||||||||||||||
Sbjct  764  GTACCACAGAGAGAAAACATGAAATTAAAAAAATACCTCCTGAAAGACCAGAAACCCTTCCAAACAGAACAGAA  837

Query 1132  GAAAAAGAAAGACCAGAGAGAGAGCCAAAACTGGATTTACAGAAGCCCTCCGTTCCTGCCATACCGCCAAAAAA  1205
            ||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.||||||||
Sbjct  838  GAGAAAGAAAGACCAGAGAGAGAGCCAAAACTGGATTTACAGAAGCCTTCAGTTCCTGCCATCCCACCAAAAAA  911

Query 1206  GCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGGCCGGAGAGACCGGTGG  1279
            |||||||||||||||||||||||||||.|.|||||||||.|||.|||||||.|||||.||.|||.||||.||||
Sbjct  912  GCCTCGGCCACCTAAGACCAATTCTCTGAACAGACCTGGTGCATTGCCCCCAAGAAGACCTGAGCGACCAGTGG  985

Query 1280  GTCCGCTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCCTGGAC  1353
            |.||.|||||||||||||||||||||||||||||||||||||||||.|||||..|.||.||||||||||||||.
Sbjct  986  GCCCACTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCAGGCAGCGCACTCTCTGGCATCCTGGAT  1059

Query 1354  AAAGATCTCTCGGACCGCAGCAATGACATTGACTTAGAAGGTTTTGACTCCGTGGTATCATCTACTGAGAAACT  1427
            ||.||.|||||.||||||||||||||.|||||||||||||||||||||||.|||.|||||||||||||||||||
Sbjct 1060  AAGGACCTCTCAGACCGCAGCAATGATATTGACTTAGAAGGTTTTGACTCTGTGATATCATCTACTGAGAAACT  1133

Query 1428  CAGTCATCCGACCACAAGCAGACCAAAAGCTACAGGGAGGCGGCCTCCGTCCCAGTCCCTCACATCTTCATCCC  1501
            |||.||.||.||||||||||||||||||||||||||.||.||||||||.||||||||.|||||||||||.||||
Sbjct 1134  CAGCCACCCAACCACAAGCAGACCAAAAGCTACAGGAAGACGGCCTCCATCCCAGTCACTCACATCTTCTTCCC  1207

Query 1502  TTTCAAGCCCTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATAAGGAGGAACACATTTCACTTGCGCACAGA  1575
            ||||||||||.||||||||.||||||||||||||||||||.|||||.||||||||||||||.||||||||||||
Sbjct 1208  TTTCAAGCCCCGATATCTTTGACTCCCCAAGTCCCGAAGAAGATAAAGAGGAACACATTTCGCTTGCGCACAGA  1281

Query 1576  GGAGTGGACGCGTCAAAGAAAACTTCCAAGACTGTTACCATATCCCAAGTGTCTGACAACAAAGCATCCCTGCC  1649
            |||.|.||||.|||||||||.|||||||||||||||||||||||||||||||||||.|||||..||||||||||
Sbjct 1282  GGAATAGACGTGTCAAAGAAGACTTCCAAGACTGTTACCATATCCCAAGTGTCTGATAACAAGACATCCCTGCC  1355

Query 1650  GCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAGCCCCTCTGTCCTCAGCGGTGCCCTCCCCCCTGT  1723
            .||||||||.||||||||||||||.|...||.||||||||||..||||.||.||||.||...||||.|||.|||
Sbjct 1356  ACCCAAGCCAGGGACCATGGCAGCTGCCAGCAGTGGGCCAGCTTCTCTCTCTTCAGTGGCATCCTCACCCATGT  1429

Query 1724  CATCCTCTTTGGGAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAAAGATG  1797
            |||||||||||||||||||||||||.|||||||..||.||.|||||||||.||||.||||||||.|||||||||
Sbjct 1430  CATCCTCTTTGGGAACAGCTGGACAGAGAGCCAGTTCTCCATCTCTGTTCAGCACAGAAGGAAAGCCAAAGATG  1503

Query 1798  GAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGAGCTAAGGACACAGGTCCGCGAGCTGAGGAGCATCATCGA  1871
            |||||.||.|..|||||||||||.||..|.||||||||.|.||..||.|||||.||||||||||.||||||.||
Sbjct 1504  GAGCCAGCAGTGAGCAGCCAGGCTGCTATCGAGGAGCTTAAGATGCAAGTCCGTGAGCTGAGGACCATCATTGA  1577

Query 1872  GACCATGAAGGACCAGCAGAAACGAGAGATTAAACAGTTATTGTCTGAGTTGGATGAAGAGAAGAAAATCCGGC  1945
            ||||||||||||||||||||||||.||||||||.||||||.||||.||.||||||||||||||.||.|||||||
Sbjct 1578  GACCATGAAGGACCAGCAGAAACGTGAGATTAAGCAGTTACTGTCAGAATTGGATGAAGAGAAAAAGATCCGGC  1651

Query 1946  TTCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTACAATCAAAA  1995
            |.||||||||||||||||||||||||||||||||||||||.||||||||.
Sbjct 1652  TCCGGTTGCAGATGGAAGTGAACGACATAAAGAAAGCTCTTCAATCAAAG  1701

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