Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08191
Subject:
NR_147848.2
Aligned Length:
3045
Identities:
907
Gaps:
2121

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAGTATGAGTGGAGATAATTACGGAGAAGTCATACTCTCTCACACCCTCGGCTTTCTTGTTGTGTCCTTCAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAACAGTGGATTTAAATCTCCTTGCACAAGCTTGAGAGCAACACAATCTATCAGGAAAGAAAGAAAGAAAAAA  148

Query    1  --------------------------------------------ATGGGGGTCTGTGGGTACCTGTTCCTGCCC  30
                                                        |          ||...|||  .|||.||| 
Sbjct  149  ACCGAACCTGACAAAAAAGAAGAAAAAGAAGAAGAAAAAAAATCA----------TGAAAACC--ATCCAGCC-  209

Query   31  TGGAAGTGC----------CTCGTGGTCGTGTCTCTCA-------GGCTGC----TGTTCCTTGTACCCACAGG  83
             ..||.|||          |||.|||.| ..||| |||       ||||||    |||..|||    ||| |||
Sbjct  210  -AAAAATGCACAATTCTATCTCTTGGGC-AATCT-TCACGGGGCTGGCTGCTCTGTGTCTCTT----CCA-AGG  275

Query   84  AGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGGGAGAGCG  157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  276  AGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGGGAGAGCG  349

Query  158  CCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCTCTATGCT  231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  350  CCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCTCTATGCT  423

Query  232  GGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCATCGAGAT  305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  424  GGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCATCGAGAT  497

Query  306  CCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAGACCTCTA  379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  498  CCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAGACCTCTA  571

Query  380  GGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAAC  453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  572  GGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAAC  645

Query  454  AATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTCCCAAAGC  527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  646  AATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTCCCAAAGC  719

Query  528  GGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGACTACGAGT  601
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  720  GGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGACTACGAGT  793

Query  602  GCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACCATACATT  675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  794  GCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACCATACATT  867

Query  676  TCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAGTCCCCTC  749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  868  TCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAGTCCCCTC  941

Query  750  AGCAGAATTCCAGTGGTACAAGGATGACAAAA------------------------------------------  781
            ||||||||||||||||||||||||||||||||                                          
Sbjct  942  AGCAGAATTCCAGTGGTACAAGGATGACAAAAGAGCTGAAATCTCATTCACAGTTTGGTTATGATGGGAAAGCT  1015

Query  782  --------------------------------------------------------------------------  781
                                                                                      
Sbjct 1016  TCCTCCCCATGGTGGACGAATGGTGTCAAAACGGCCAGTGGGATCAATCAGCCTGACTTGCTCGCAGAATCCTC  1089

Query  782  --GACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATG  853
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090  CCGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATG  1163

Query  854  TCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAGCATCATG  927
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164  TCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAGCATCATG  1237

Query  928  CTATTTGGT---------------GAGACTGTGCTC--------------------------------------  948
            |||||||||               |||   |||..|                                      
Sbjct 1238  CTATTTGGTCCAGGCGCCGTCAGCGAG---GTGAGCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCT  1308

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1309  GCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTTTGATGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGC  1382

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1383  CACCACCACCACCAACACAACAGCAATGGCAACACCGACAGCAACCAATCAGATATATACAAATGAAATTAGAA  1456

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1457  GAAACACAGCCTCATGGGACAGAAATTTGAGGGAGGGGAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAA  1530

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1531  AAGAAATTGAAAATTGCCTTGCAGATATTTAGGTACAATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCA  1604

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1605  CACCCGGCTTGGACCCACTGCAAGCTGCATCGTGCAACCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCT  1678

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1679  CTGCCCACAGAGTGCCCCCACGTGGAACATTCTGGAGCTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAA  1752

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1753  CAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTGCGGGCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGT  1826

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1827  GAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAGGAAACAAAATAAGACCGTCTGACAGCAACAACGGTCCCAC  1900

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1901  AAACAAGTCACAAAAGATACCGTTAAACTTTTTTTTTTTTTTATCATTTTACTACATGAACATCATGGATAACA  1974

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1975  AGGGATTCTGATTCATTATTAATTTCATTAATTATATTTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAG  2048

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2049  ACAAAACTAAAAAAATACAACTGAGAAGGGTGAAGAGAAGTATGTTTGTTAAACAGTAAAAATGAATAGTATAC  2122

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2123  TTCTTAACTAGGTTTACAACTGGTGGACCACACACCAGGCACTAATCACCTGGTGAGGATTTGGCATATCCACC  2196

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2197  AAAAAATGCATCCGATTTAACCAACATCTCCACCAGCGCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGA  2270

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2271  CAATACTATGCTCTCTACACACTGTTTAGAAATGGAAAGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATG  2344

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2345  CTTCCTTTGATGACATATATTATACAGTATATATATACATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATT  2418

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2419  TCTCCGCAGGGTCCTTTCTCAGACATTACTGCATGCTGTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGA  2492

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2493  TGATAGAGTTTACTGGTAATTGTGTAATCAGCTCCTGCCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGAC  2566

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2567  ATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAAAACAACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCT  2640

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2641  CTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCTCCATTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGA  2714

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2715  ACAAGCAGTACCGTCAGTACCCACTTGCTTTAGCCCATTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGA  2788

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2789  GTTTAATCCTCTTGGTTTATTTTATTTCCCACCTTTGTGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTT  2862

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2863  AGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAAGTCTGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATG  2936

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2937  TGATGAGGGAAAGGGGGATTGGGGGATCCGGGAGGGTGGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCAT  3010

Query  949  -----------  948
                       
Sbjct 3011  GTCCCTCTTCA  3021

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